RNA–Protein interactions for RNA: ENST00000555178.5

TDP1-211, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 2,200 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-211ENST00000555178 HLA-DRB1P01911 266 aa8.49□□□□□ -1.05
TDP1-211ENST00000555178 OR13C7P0DN81 318 aa8.49□□□□□ -1.05
TDP1-211ENST00000555178 RPL23AP62750 156 aaKnown RBP8.49□□□□□ -1.05
TDP1-211ENST00000555178 C9orf152Q5JTZ5 239 aa8.49□□□□□ -1.05
TDP1-211ENST00000555178 ASPHD1Q5U4P2 390 aa8.49□□□□□ -1.05
TDP1-211ENST00000555178 OR8G2PQ6IF36 304 aa8.49□□□□□ -1.05
TDP1-211ENST00000555178 TMUB2Q71RG4 321 aa8.49□□□□□ -1.05
TDP1-211ENST00000555178 OR8H1Q8NGG4 311 aa8.49□□□□□ -1.05
TDP1-211ENST00000555178 ABHD5Q8WTS1 349 aa8.49□□□□□ -1.05
TDP1-211ENST00000555178 ARPC1AQ92747 370 aa8.49□□□□□ -1.05
TDP1-211ENST00000555178 ZC4H2Q9NQZ6 224 aa8.49□□□□□ -1.05
TDP1-211ENST00000555178 ATP6V0E1O15342 81 aa8.48□□□□□ -1.05
TDP1-211ENST00000555178 IFNA10P01566 189 aa8.48□□□□□ -1.05
TDP1-211ENST00000555178 HILS1P60008 231 aa8.48□□□□□ -1.05
TDP1-211ENST00000555178 TMEM14EPQ6UXP3 125 aa8.48□□□□□ -1.05
TDP1-211ENST00000555178 ZNF562Q6V9R5 426 aa8.48□□□□□ -1.05
TDP1-211ENST00000555178 SLC24A4Q8NFF2 622 aa8.48□□□□□ -1.05
TDP1-211ENST00000555178 NOL4LQ96MY1 436 aaPredicted RBP8.48□□□□□ -1.05
TDP1-211ENST00000555178 WFDC1Q9HC57 220 aa8.48□□□□□ -1.05
TDP1-211ENST00000555178 ENY2Q9NPA8 101 aa8.48□□□□□ -1.05
TDP1-211ENST00000555178 PARP11Q9NR21 331 aa8.48□□□□□ -1.05
TDP1-211ENST00000555178 FBXL17Q9UF56 701 aa8.48□□□□□ -1.05
TDP1-211ENST00000555178 PMS2P5A8MQ11 134 aa8.48□□□□□ -1.05
TDP1-211ENST00000555178 PRH1P02810 166 aa8.48□□□□□ -1.05
TDP1-211ENST00000555178 MAS1LP35410 378 aa8.48□□□□□ -1.05
TDP1-211ENST00000555178 MFAP2P55001 183 aa8.48□□□□□ -1.05
TDP1-211ENST00000555178 UBA52P62987 128 aaKnown RBP8.48□□□□□ -1.05
TDP1-211ENST00000555178 CLINT1Q14677 625 aa8.48□□□□□ -1.05
TDP1-211ENST00000555178 C10orf99Q6UWK7 81 aa8.48□□□□□ -1.05
TDP1-211ENST00000555178 KCNRGQ8N5I3 272 aa8.48□□□□□ -1.05
TDP1-211ENST00000555178 TEX29Q8N6K0 151 aa8.48□□□□□ -1.05
TDP1-211ENST00000555178 LFNGQ8NES3 379 aa8.48□□□□□ -1.05
TDP1-211ENST00000555178 OR5R1Q8NH85 324 aa8.48□□□□□ -1.05
TDP1-211ENST00000555178 HIPK2Q9H2X6 1198 aa8.48□□□□□ -1.05
TDP1-211ENST00000555178 DMRT1Q9Y5R6 373 aa8.48□□□□□ -1.05
TDP1-211ENST00000555178 G3V318 75 aa8.47□□□□□ -1.05
TDP1-211ENST00000555178 FGF16O43320 207 aa8.47□□□□□ -1.05
TDP1-211ENST00000555178 RNASE2P10153 161 aaKnown RBP8.47□□□□□ -1.05
TDP1-211ENST00000555178 S100A11P31949 105 aa8.47□□□□□ -1.05
TDP1-211ENST00000555178 TAS2R30P59541 319 aa8.47□□□□□ -1.05
TDP1-211ENST00000555178 DEFA5Q01523 94 aa8.47□□□□□ -1.05
TDP1-211ENST00000555178 OR2F1Q13607 317 aa8.47□□□□□ -1.05
TDP1-211ENST00000555178 ZNF345Q14585 488 aa8.47□□□□□ -1.05
TDP1-211ENST00000555178 ECSCRQ19T08 205 aa8.47□□□□□ -1.05
TDP1-211ENST00000555178 RBMS3Q6XE24 437 aaKnown RBP8.47□□□□□ -1.05
TDP1-211ENST00000555178 OR5C1Q8NGR4 320 aa8.47□□□□□ -1.05
TDP1-211ENST00000555178 CIB3Q96Q77 187 aaPredicted RBP8.47□□□□□ -1.05
TDP1-211ENST00000555178 P2RX4Q99571 388 aa8.47□□□□□ -1.05
TDP1-211ENST00000555178 ZNF702PQ9H963 129 aa8.47□□□□□ -1.05
TDP1-211ENST00000555178 PITPNC1Q9UKF7 332 aa8.47□□□□□ -1.05
TDP1-211ENST00000555178 STRAPQ9Y3F4 350 aaKnown RBP8.47□□□□□ -1.05
TDP1-211ENST00000555178 BTBD17A6NE02 478 aa8.46□□□□□ -1.05
TDP1-211ENST00000555178 NPY1RP25929 384 aa8.46□□□□□ -1.05
TDP1-211ENST00000555178 OPCMLQ14982 345 aa8.46□□□□□ -1.05
TDP1-211ENST00000555178 BSXQ3C1V8 233 aa8.46□□□□□ -1.05
TDP1-211ENST00000555178 A0A1W2PN81 502 aa8.46□□□□□ -1.06
TDP1-211ENST00000555178 IGHV3-48P01763 117 aa8.46□□□□□ -1.06
TDP1-211ENST00000555178 CHRNA7P36544 502 aa8.46□□□□□ -1.06
TDP1-211ENST00000555178 NUP62P37198 522 aaPredicted RBP8.46□□□□□ -1.06
TDP1-211ENST00000555178 SULT1A1P50225 295 aa8.46□□□□□ -1.06
TDP1-211ENST00000555178 MLANAQ16655 118 aa8.46□□□□□ -1.06
TDP1-211ENST00000555178 PRIMA1Q86XR5 153 aa8.46□□□□□ -1.06
TDP1-211ENST00000555178 STX12Q86Y82 276 aa8.46□□□□□ -1.06
TDP1-211ENST00000555178 ZNF418Q8TF45 676 aaPredicted RBP8.46□□□□□ -1.06
TDP1-211ENST00000555178 CYTL1Q9NRR1 136 aa8.46□□□□□ -1.06
TDP1-211ENST00000555178 IGHV3-21A0A0B4J1V1 117 aa8.45□□□□□ -1.06
TDP1-211ENST00000555178 PRSS46E5RG02 174 aa8.45□□□□□ -1.06
TDP1-211ENST00000555178 BCL2L11O43521 198 aa8.45□□□□□ -1.06
TDP1-211ENST00000555178 OR8U8P0C7N1 319 aa8.45□□□□□ -1.06
TDP1-211ENST00000555178 SNCAP37840 140 aa8.45□□□□□ -1.06
TDP1-211ENST00000555178 RPL7L1Q6DKI1 246 aaKnown RBP8.45□□□□□ -1.06
TDP1-211ENST00000555178 Q6ZSV7 163 aa8.45□□□□□ -1.06
TDP1-211ENST00000555178 OR5T1Q8NG75 326 aa8.45□□□□□ -1.06
TDP1-211ENST00000555178 SLC25A31Q9H0C2 315 aa8.45□□□□□ -1.06
TDP1-211ENST00000555178 RFNGQ9Y644 331 aa8.45□□□□□ -1.06
TDP1-211ENST00000555178 U3KQ87 197 aa8.45□□□□□ -1.06
TDP1-211ENST00000555178 A0A0D9SG52 128 aa8.45□□□□□ -1.06
TDP1-211ENST00000555178 INS-IGF2F8WCM5 200 aa8.45□□□□□ -1.06
TDP1-211ENST00000555178 SOX15O60248 233 aa8.45□□□□□ -1.06
TDP1-211ENST00000555178 FBXO24O75426 580 aa8.45□□□□□ -1.06
TDP1-211ENST00000555178 IFNA4P05014 189 aa8.45□□□□□ -1.06
TDP1-211ENST00000555178 HTR2BP41595 481 aa8.45□□□□□ -1.06
TDP1-211ENST00000555178 ERHP84090 104 aaKnown RBP8.45□□□□□ -1.06
TDP1-211ENST00000555178 SLC38A11Q08AI6 406 aa8.45□□□□□ -1.06
TDP1-211ENST00000555178 ETV3LQ6ZN32 361 aa8.45□□□□□ -1.06
TDP1-211ENST00000555178 LCNL1Q6ZST4 164 aa8.45□□□□□ -1.06
TDP1-211ENST00000555178 ARPC5LQ9BPX5 153 aa8.45□□□□□ -1.06
TDP1-211ENST00000555178 CACFD1Q9UGQ2 172 aa8.45□□□□□ -1.06
TDP1-211ENST00000555178 KANTRA0A1W2PQU2 76 aa8.44□□□□□ -1.06
TDP1-211ENST00000555178 CFDP00746 253 aaPredicted RBP8.44□□□□□ -1.06
TDP1-211ENST00000555178 IGHG2P01859 326 aa8.44□□□□□ -1.06
TDP1-211ENST00000555178 RNASE1P07998 156 aaKnown RBP8.44□□□□□ -1.06
TDP1-211ENST00000555178 CTRB1P17538 263 aa8.44□□□□□ -1.06
TDP1-211ENST00000555178 BAXQ07812 192 aa8.44□□□□□ -1.06
TDP1-211ENST00000555178 C2orf83Q53S99 150 aa8.44□□□□□ -1.06
TDP1-211ENST00000555178 CTRB2Q6GPI1 263 aa8.44□□□□□ -1.06
TDP1-211ENST00000555178 C16orf82Q7Z2V1 217 aa8.44□□□□□ -1.06
TDP1-211ENST00000555178 TMEM86BQ8N661 226 aa8.44□□□□□ -1.06
TDP1-211ENST00000555178 SGMS2Q8NHU3 365 aa8.44□□□□□ -1.06
TDP1-211ENST00000555178 PINX1Q96BK5 328 aaKnown RBP8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms