RNA–Protein interactions for RNA: ENST00000554928.1

SYNE2-214, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 1,048 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-214ENST00000554928 HSPE1P61604 102 aaKnown RBP9.46□□□□□ -0.9
SYNE2-214ENST00000554928 EGFEM1PQ0D2K5 195 aa9.46□□□□□ -0.9
SYNE2-214ENST00000554928 OR5B3Q8NH48 314 aa9.46□□□□□ -0.9
SYNE2-214ENST00000554928 LSM10Q969L4 123 aaKnown RBP9.46□□□□□ -0.9
SYNE2-214ENST00000554928 GALNT14Q96FL9 552 aa9.46□□□□□ -0.9
SYNE2-214ENST00000554928 TMEM56Q96MV1 263 aa9.46□□□□□ -0.9
SYNE2-214ENST00000554928 TSC22D3Q99576 134 aa9.46□□□□□ -0.9
SYNE2-214ENST00000554928 SRSF8Q9BRL6 282 aaKnown RBP9.46□□□□□ -0.9
SYNE2-214ENST00000554928 RANGRFQ9HD47 186 aaPredicted RBP9.46□□□□□ -0.9
SYNE2-214ENST00000554928 TMEM56-RWDD3S4R434 201 aa9.46□□□□□ -0.9
SYNE2-214ENST00000554928 WI2-2373I1.2A0A1W2PRP0 233 aa9.45□□□□□ -0.9
SYNE2-214ENST00000554928 NXPH3O95157 252 aa9.45□□□□□ -0.9
SYNE2-214ENST00000554928 DUS4LO95620 317 aaKnown RBP9.45□□□□□ -0.9
SYNE2-214ENST00000554928 DEFA4P12838 97 aa9.45□□□□□ -0.9
SYNE2-214ENST00000554928 MECP2P51608 486 aaKnown RBP9.45□□□□□ -0.9
SYNE2-214ENST00000554928 SYNJ2BPP57105 145 aa9.45□□□□□ -0.9
SYNE2-214ENST00000554928 PRCDQ00LT1 54 aa9.45□□□□□ -0.9
SYNE2-214ENST00000554928 DHODHQ02127 395 aa9.45□□□□□ -0.9
SYNE2-214ENST00000554928 KLF5Q13887 457 aaPredicted RBP9.45□□□□□ -0.9
SYNE2-214ENST00000554928 ANKRD55Q3KP44 614 aa9.45□□□□□ -0.9
SYNE2-214ENST00000554928 SLC25A24Q6NUK1 477 aa9.45□□□□□ -0.9
SYNE2-214ENST00000554928 CLEC19AQ6UXS0 136 aa9.45□□□□□ -0.9
SYNE2-214ENST00000554928 IL34Q6ZMJ4 242 aa9.45□□□□□ -0.9
SYNE2-214ENST00000554928 LYZL2Q7Z4W2 148 aa9.45□□□□□ -0.9
SYNE2-214ENST00000554928 SGPP2Q8IWX5 399 aa9.45□□□□□ -0.9
SYNE2-214ENST00000554928 OR2C3Q8N628 320 aa9.45□□□□□ -0.9
SYNE2-214ENST00000554928 SLC35G3Q8N808 338 aa9.45□□□□□ -0.9
SYNE2-214ENST00000554928 RBPMSQ93062 196 aaKnown RBP9.45□□□□□ -0.9
SYNE2-214ENST00000554928 ZC4H2Q9NQZ6 224 aa9.45□□□□□ -0.9
SYNE2-214ENST00000554928 F11RQ9Y624 299 aaKnown RBP9.45□□□□□ -0.9
SYNE2-214ENST00000554928 B3GALNT1O75752 331 aa9.44□□□□□ -0.9
SYNE2-214ENST00000554928 INPP1P49441 399 aa9.44□□□□□ -0.9
SYNE2-214ENST00000554928 PPP1R1AQ13522 171 aa9.44□□□□□ -0.9
SYNE2-214ENST00000554928 PDLIM3Q53GG5 364 aaPredicted RBP9.44□□□□□ -0.9
SYNE2-214ENST00000554928 C9orf66Q5T8R8 295 aa9.44□□□□□ -0.9
SYNE2-214ENST00000554928 THOC7Q6I9Y2 204 aaKnown RBP9.44□□□□□ -0.9
SYNE2-214ENST00000554928 ACSM6Q6P461 480 aa9.44□□□□□ -0.9
SYNE2-214ENST00000554928 ZNF429Q86V71 674 aa9.44□□□□□ -0.9
SYNE2-214ENST00000554928 RNASE11Q8TAA1 199 aaKnown RBP9.44□□□□□ -0.9
SYNE2-214ENST00000554928 ZNF502Q8TBZ5 544 aa9.44□□□□□ -0.9
SYNE2-214ENST00000554928 RRNAD1Q96FB5 475 aaKnown RBP9.44□□□□□ -0.9
SYNE2-214ENST00000554928 SCGB3A2Q96PL1 93 aa9.44□□□□□ -0.9
SYNE2-214ENST00000554928 MCRIP2Q9BUT9 160 aaKnown RBP9.44□□□□□ -0.9
SYNE2-214ENST00000554928 FKBP11Q9NYL4 201 aa9.44□□□□□ -0.9
SYNE2-214ENST00000554928 CACNG5Q9UF02 275 aa9.44□□□□□ -0.9
SYNE2-214ENST00000554928 F8W735 103 aaPredicted RBP9.43□□□□□ -0.9
SYNE2-214ENST00000554928 K7EIL1 84 aa9.43□□□□□ -0.9
SYNE2-214ENST00000554928 K7EIM0 57 aa9.43□□□□□ -0.9
SYNE2-214ENST00000554928 NDUFB6O95139 128 aa9.43□□□□□ -0.9
SYNE2-214ENST00000554928 OR2C1O95371 312 aa9.43□□□□□ -0.9
SYNE2-214ENST00000554928 IGHV3-48P01763 117 aa9.43□□□□□ -0.9
SYNE2-214ENST00000554928 HIST1H1BP16401 226 aaKnown RBP9.43□□□□□ -0.9
SYNE2-214ENST00000554928 NMSQ5H8A3 153 aa9.43□□□□□ -0.9
SYNE2-214ENST00000554928 ADAMTSL5Q6ZMM2 481 aa9.43□□□□□ -0.9
SYNE2-214ENST00000554928 DEDD2Q8WXF8 326 aa9.43□□□□□ -0.9
SYNE2-214ENST00000554928 ZNF414Q96IQ9 312 aa9.43□□□□□ -0.9
SYNE2-214ENST00000554928 PRR25Q96S07 402 aa9.43□□□□□ -0.9
SYNE2-214ENST00000554928 SLC25A21Q9BQT8 299 aaPredicted RBP9.43□□□□□ -0.9
SYNE2-214ENST00000554928 PTTG2Q9NZH5 202 aa9.43□□□□□ -0.9
SYNE2-214ENST00000554928 SAP30O75446 220 aa9.42□□□□□ -0.9
SYNE2-214ENST00000554928 SFT2D2O95562 160 aa9.42□□□□□ -0.9
SYNE2-214ENST00000554928 DHFRP00374 187 aa9.42□□□□□ -0.9
SYNE2-214ENST00000554928 IFNA17P01571 189 aa9.42□□□□□ -0.9
SYNE2-214ENST00000554928 ANXA7P20073 488 aaKnown RBP9.42□□□□□ -0.9
SYNE2-214ENST00000554928 ZP3P21754 424 aa9.42□□□□□ -0.9
SYNE2-214ENST00000554928 VAMP1P23763 118 aa9.42□□□□□ -0.9
SYNE2-214ENST00000554928 GPR183P32249 361 aa9.42□□□□□ -0.9
SYNE2-214ENST00000554928 RBMS2Q15434 407 aaKnown RBP9.42□□□□□ -0.9
SYNE2-214ENST00000554928 RPEL1Q2QD12 228 aa9.42□□□□□ -0.9
SYNE2-214ENST00000554928 AARDQ4LEZ3 155 aa9.42□□□□□ -0.9
SYNE2-214ENST00000554928 TMEM128Q5BJH2 165 aa9.42□□□□□ -0.9
SYNE2-214ENST00000554928 HSD17B13Q7Z5P4 300 aaPredicted RBP9.42□□□□□ -0.9
SYNE2-214ENST00000554928 CENPSQ8N2Z9 138 aa9.42□□□□□ -0.9
SYNE2-214ENST00000554928 SCARB1Q8WTV0 552 aa9.42□□□□□ -0.9
SYNE2-214ENST00000554928 IL22RA2Q969J5 263 aa9.42□□□□□ -0.9
SYNE2-214ENST00000554928 EEF1AKMT3Q96AZ1 226 aa9.42□□□□□ -0.9
SYNE2-214ENST00000554928 PLEKHA3Q9HB20 300 aa9.42□□□□□ -0.9
SYNE2-214ENST00000554928 KCNIP3Q9Y2W7 256 aa9.42□□□□□ -0.9
SYNE2-214ENST00000554928 SELENOKQ9Y6D0 94 aa9.42□□□□□ -0.9
SYNE2-214ENST00000554928 IGHV3-35A0A0C4DH35 117 aa9.41□□□□□ -0.9
SYNE2-214ENST00000554928 NAP1L6A6NFF2 107 aa9.41□□□□□ -0.9
SYNE2-214ENST00000554928 I3L2K1 104 aa9.41□□□□□ -0.9
SYNE2-214ENST00000554928 LYRM1O43325 122 aa9.41□□□□□ -0.9
SYNE2-214ENST00000554928 ATG12O94817 140 aa9.41□□□□□ -0.9
SYNE2-214ENST00000554928 CLEC3BP05452 202 aa9.41□□□□□ -0.9
SYNE2-214ENST00000554928 CSN3P07498 182 aa9.41□□□□□ -0.9
SYNE2-214ENST00000554928 RNASE2P10153 161 aaKnown RBP9.41□□□□□ -0.9
SYNE2-214ENST00000554928 ARL3P36405 182 aa9.41□□□□□ -0.9
SYNE2-214ENST00000554928 IFITM3Q01628 133 aa9.41□□□□□ -0.9
SYNE2-214ENST00000554928 LCE2CQ5TA81 110 aa9.41□□□□□ -0.9
SYNE2-214ENST00000554928 FAM219AQ8IW50 185 aa9.41□□□□□ -0.9
SYNE2-214ENST00000554928 LGI3Q8N145 548 aa9.41□□□□□ -0.9
SYNE2-214ENST00000554928 ZNF114Q8NC26 417 aa9.41□□□□□ -0.9
SYNE2-214ENST00000554928 OR9G4Q8NGQ1 327 aa9.41□□□□□ -0.9
SYNE2-214ENST00000554928 OR1P1Q8NH06 330 aa9.41□□□□□ -0.9
SYNE2-214ENST00000554928 MISP3Q96FF7 219 aa9.41□□□□□ -0.9
SYNE2-214ENST00000554928 TBC1D24Q9ULP9 559 aa9.41□□□□□ -0.9
SYNE2-214ENST00000554928 A0A0B4J2A0 478 aa9.4□□□□□ -0.9
SYNE2-214ENST00000554928 OR2T8A6NH00 312 aa9.4□□□□□ -0.9
SYNE2-214ENST00000554928 HOXA1P49639 335 aaPredicted RBP9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms