RNA–Protein interactions for RNA: ENST00000554873.5

SYNE3-203, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 5 BASIC

Gene SYNE3, Length 2,826 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-203ENST00000554873 JKAMPQ9P055 326 aa12.96□□□□□ -0.34
SYNE3-203ENST00000554873 DOCK7Q96N67 2140 aa12.95□□□□□ -0.34
SYNE3-203ENST00000554873 HTR1DP28221 377 aa12.95□□□□□ -0.34
SYNE3-203ENST00000554873 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.95□□□□□ -0.34
SYNE3-203ENST00000554873 CLCF1Q9UBD9 225 aa12.95□□□□□ -0.34
SYNE3-203ENST00000554873 TRBV6-6A0A0A6YYG2 114 aa12.95□□□□□ -0.34
SYNE3-203ENST00000554873 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.95□□□□□ -0.34
SYNE3-203ENST00000554873 OPRK1P41145 380 aa12.95□□□□□ -0.34
SYNE3-203ENST00000554873 CT55Q8WUE5 264 aa12.95□□□□□ -0.34
SYNE3-203ENST00000554873 IL1F10Q8WWZ1 152 aa12.95□□□□□ -0.34
SYNE3-203ENST00000554873 SSBP4Q9BWG4 385 aaPredicted RBP12.95□□□□□ -0.34
SYNE3-203ENST00000554873 OR1A1Q9P1Q5 309 aa12.95□□□□□ -0.34
SYNE3-203ENST00000554873 KCNS2Q9ULS6 477 aa12.95□□□□□ -0.34
SYNE3-203ENST00000554873 TNRC6AQ8NDV7 1962 aaKnown RBP12.95□□□□□ -0.34
SYNE3-203ENST00000554873 MPDU1O75352 247 aa12.94□□□□□ -0.34
SYNE3-203ENST00000554873 SRYQ05066 204 aa12.94□□□□□ -0.34
SYNE3-203ENST00000554873 TMEM97Q5BJF2 176 aa12.94□□□□□ -0.34
SYNE3-203ENST00000554873 FAM120AOSQ5T036 256 aa12.94□□□□□ -0.34
SYNE3-203ENST00000554873 PPP1R32Q7Z5V6 425 aa12.94□□□□□ -0.34
SYNE3-203ENST00000554873 OR4A5Q8NH83 315 aa12.94□□□□□ -0.34
SYNE3-203ENST00000554873 PMCHL2Q9BQD1 86 aa12.94□□□□□ -0.34
SYNE3-203ENST00000554873 HELTA6NFD8 242 aa12.94□□□□□ -0.34
SYNE3-203ENST00000554873 NPIPB11E5RHQ5 1161 aa12.94□□□□□ -0.34
SYNE3-203ENST00000554873 AREGP15514 252 aa12.94□□□□□ -0.34
SYNE3-203ENST00000554873 HSD52Q0P140 79 aa12.94□□□□□ -0.34
SYNE3-203ENST00000554873 FAM162BQ5T6X4 162 aa12.94□□□□□ -0.34
SYNE3-203ENST00000554873 SLC35E4Q6ICL7 350 aa12.94□□□□□ -0.34
SYNE3-203ENST00000554873 PQLC2Q6ZP29 291 aa12.94□□□□□ -0.34
SYNE3-203ENST00000554873 FAM216AQ8WUB2 273 aa12.94□□□□□ -0.34
SYNE3-203ENST00000554873 ZDHHC16Q969W1 377 aa12.94□□□□□ -0.34
SYNE3-203ENST00000554873 TRAV26-1A0A087WT03 109 aa12.94□□□□□ -0.34
SYNE3-203ENST00000554873 H3BUT2 72 aa12.94□□□□□ -0.34
SYNE3-203ENST00000554873 NTN3O00634 580 aaPredicted RBP12.94□□□□□ -0.34
SYNE3-203ENST00000554873 CRYBA4P53673 196 aa12.94□□□□□ -0.34
SYNE3-203ENST00000554873 TIGITQ495A1 244 aa12.94□□□□□ -0.34
SYNE3-203ENST00000554873 OR10AG1Q8NH19 301 aa12.94□□□□□ -0.34
SYNE3-203ENST00000554873 DLL3Q9NYJ7 618 aa12.94□□□□□ -0.34
SYNE3-203ENST00000554873 SELENOKQ9Y6D0 94 aa12.94□□□□□ -0.34
SYNE3-203ENST00000554873 HBZP02008 142 aa12.93□□□□□ -0.34
SYNE3-203ENST00000554873 CKS1BP61024 79 aa12.93□□□□□ -0.34
SYNE3-203ENST00000554873 RPL8P62917 257 aaKnown RBP12.93□□□□□ -0.34
SYNE3-203ENST00000554873 ESPL1Q14674 2120 aa12.93□□□□□ -0.34
SYNE3-203ENST00000554873 TUSC5Q8IXB3 177 aa12.93□□□□□ -0.34
SYNE3-203ENST00000554873 THYN1Q9P016 225 aa12.93□□□□□ -0.34
SYNE3-203ENST00000554873 DIDO1Q9BTC0 2240 aaKnown RBP12.93□□□□□ -0.34
SYNE3-203ENST00000554873 DOCK10Q96BY6 2186 aa12.93□□□□□ -0.34
SYNE3-203ENST00000554873 IGKV3D-15A0A087WSY6 115 aa12.93□□□□□ -0.34
SYNE3-203ENST00000554873 PSMB11A5LHX3 300 aa12.93□□□□□ -0.34
SYNE3-203ENST00000554873 A6NDN8 102 aa12.93□□□□□ -0.34
SYNE3-203ENST00000554873 SS18L1O75177 396 aaPredicted RBP12.93□□□□□ -0.34
SYNE3-203ENST00000554873 P0C879 139 aa12.93□□□□□ -0.34
SYNE3-203ENST00000554873 RAB31Q13636 194 aa12.93□□□□□ -0.34
SYNE3-203ENST00000554873 TMEM95Q3KNT9 176 aa12.93□□□□□ -0.34
SYNE3-203ENST00000554873 C2orf91Q6ZV80 131 aa12.93□□□□□ -0.34
SYNE3-203ENST00000554873 BPIFA4PQ86YQ2 179 aa12.93□□□□□ -0.34
SYNE3-203ENST00000554873 STXBP6Q8NFX7 210 aa12.93□□□□□ -0.34
SYNE3-203ENST00000554873 LINC00470Q9BZP3 86 aa12.93□□□□□ -0.34
SYNE3-203ENST00000554873 GTF3C1Q12789 2109 aa12.93□□□□□ -0.34
SYNE3-203ENST00000554873 DMDP11532 3685 aa12.92□□□□□ -0.34
SYNE3-203ENST00000554873 RHBDL1O75783 438 aa12.92□□□□□ -0.34
SYNE3-203ENST00000554873 HIST1H1EP10412 219 aaKnown RBP12.92□□□□□ -0.34
SYNE3-203ENST00000554873 PDLIM3Q53GG5 364 aaPredicted RBP12.92□□□□□ -0.34
SYNE3-203ENST00000554873 IBA57Q5T440 356 aaKnown RBP12.92□□□□□ -0.34
SYNE3-203ENST00000554873 FAM186AA6NE01 2351 aa12.92□□□□□ -0.34
SYNE3-203ENST00000554873 APOA2P02652 100 aa12.92□□□□□ -0.34
SYNE3-203ENST00000554873 MGST1P10620 155 aaKnown RBP12.92□□□□□ -0.34
SYNE3-203ENST00000554873 G6PCP35575 357 aa12.92□□□□□ -0.34
SYNE3-203ENST00000554873 CYB561P49447 251 aa12.92□□□□□ -0.34
SYNE3-203ENST00000554873 SPINK14Q6IE38 97 aa12.92□□□□□ -0.34
SYNE3-203ENST00000554873 LINC00596Q86U02 117 aa12.92□□□□□ -0.34
SYNE3-203ENST00000554873 POM121L2Q96KW2 1035 aa12.92□□□□□ -0.34
SYNE3-203ENST00000554873 SERTAD4Q9NUC0 356 aa12.92□□□□□ -0.34
SYNE3-203ENST00000554873 TNRC6BQ9UPQ9 1833 aaKnown RBP12.92□□□□□ -0.34
SYNE3-203ENST00000554873 A0A0G2JLM5 398 aa12.91□□□□□ -0.34
SYNE3-203ENST00000554873 F2RL2O00254 374 aa12.91□□□□□ -0.34
SYNE3-203ENST00000554873 OR2J3O76001 311 aa12.91□□□□□ -0.34
SYNE3-203ENST00000554873 CFIP05156 583 aa12.91□□□□□ -0.34
SYNE3-203ENST00000554873 SP9P0CG40 484 aa12.91□□□□□ -0.34
SYNE3-203ENST00000554873 COX8AP10176 69 aa12.91□□□□□ -0.34
SYNE3-203ENST00000554873 TDHQ8IZJ6 230 aa12.91□□□□□ -0.34
SYNE3-203ENST00000554873 VSTM2AQ8TAG5 236 aa12.91□□□□□ -0.34
SYNE3-203ENST00000554873 UBALD1Q8TB05 177 aa12.91□□□□□ -0.34
SYNE3-203ENST00000554873 C15orf62A8K5M9 175 aa12.91□□□□□ -0.34
SYNE3-203ENST00000554873 SPATA46Q5T0L3 261 aa12.91□□□□□ -0.34
SYNE3-203ENST00000554873 TMEM251Q8N6I4 163 aa12.91□□□□□ -0.34
SYNE3-203ENST00000554873 CELA3AP09093 270 aa12.9□□□□□ -0.34
SYNE3-203ENST00000554873 RPL24P83731 157 aaKnown RBP12.9□□□□□ -0.34
SYNE3-203ENST00000554873 DRAM1Q8N682 238 aa12.9□□□□□ -0.34
SYNE3-203ENST00000554873 FAM222BQ8WU58 562 aa12.9□□□□□ -0.34
SYNE3-203ENST00000554873 URB1-AS1Q96HZ7 61 aa12.9□□□□□ -0.34
SYNE3-203ENST00000554873 DNAJC13O75165 2243 aa12.9□□□□□ -0.34
SYNE3-203ENST00000554873 CELSR3Q9NYQ7 3312 aa12.9□□□□□ -0.34
SYNE3-203ENST00000554873 LEPROTL1O95214 131 aa12.9□□□□□ -0.34
SYNE3-203ENST00000554873 UQCRFS1P47985 274 aa12.9□□□□□ -0.34
SYNE3-203ENST00000554873 CD300EQ496F6 205 aaPredicted RBP12.9□□□□□ -0.34
SYNE3-203ENST00000554873 MIC13Q5XKP0 118 aa12.9□□□□□ -0.34
SYNE3-203ENST00000554873 Q6P435 159 aa12.9□□□□□ -0.34
SYNE3-203ENST00000554873 SPCS1Q9Y6A9 102 aa12.9□□□□□ -0.34
SYNE3-203ENST00000554873 MED12LQ86YW9 2145 aa12.9□□□□□ -0.35
SYNE3-203ENST00000554873 TEX48A0A1B0GUV7 120 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms