RNA–Protein interactions for RNA: ENST00000554659.5

VTI1B-204, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTI1B, Length 5,351 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-204ENST00000554659 EEF1AKMT3Q96AZ1 226 aa11.75□□□□□ -0.53
VTI1B-204ENST00000554659 SPAG8Q99932 426 aaPredicted RBP11.75□□□□□ -0.53
VTI1B-204ENST00000554659 MEGF9Q9H1U4 602 aa11.75□□□□□ -0.53
VTI1B-204ENST00000554659 IGKV1-9A0A0C4DH69 117 aa11.75□□□□□ -0.53
VTI1B-204ENST00000554659 M0R381 172 aa11.75□□□□□ -0.53
VTI1B-204ENST00000554659 LINC00271P0C7V0 271 aa11.75□□□□□ -0.53
VTI1B-204ENST00000554659 TSPOP30536 169 aa11.75□□□□□ -0.53
VTI1B-204ENST00000554659 RTTNQ86VV8 2226 aa11.75□□□□□ -0.53
VTI1B-204ENST00000554659 LOC105371242A0A075B767 164 aa11.75□□□□□ -0.53
VTI1B-204ENST00000554659 H3BUT2 72 aa11.75□□□□□ -0.53
VTI1B-204ENST00000554659 CECR9P0C854 216 aa11.75□□□□□ -0.53
VTI1B-204ENST00000554659 PNKDQ8N490 385 aa11.75□□□□□ -0.53
VTI1B-204ENST00000554659 DPH3Q96FX2 82 aa11.75□□□□□ -0.53
VTI1B-204ENST00000554659 DOPEY2Q9Y3R5 2298 aa11.75□□□□□ -0.53
VTI1B-204ENST00000554659 PATJQ8NI35 1801 aa11.74□□□□□ -0.53
VTI1B-204ENST00000554659 KBTBD11-OT1A0A1B0GTJ5 212 aa11.74□□□□□ -0.53
VTI1B-204ENST00000554659 IZUMO1RA6ND01 250 aa11.74□□□□□ -0.53
VTI1B-204ENST00000554659 PSMG4Q5JS54 123 aa11.74□□□□□ -0.53
VTI1B-204ENST00000554659 PAQR4Q8N4S7 273 aaPredicted RBP11.74□□□□□ -0.53
VTI1B-204ENST00000554659 SIGLEC12Q96PQ1 595 aa11.74□□□□□ -0.53
VTI1B-204ENST00000554659 RPP21Q9H633 154 aaKnown RBP11.74□□□□□ -0.53
VTI1B-204ENST00000554659 IGLV3-12A0A075B6K2 115 aa11.74□□□□□ -0.53
VTI1B-204ENST00000554659 B9A039 149 aa11.74□□□□□ -0.53
VTI1B-204ENST00000554659 Q6AWC8 147 aa11.74□□□□□ -0.53
VTI1B-204ENST00000554659 TCF23Q7RTU1 214 aa11.74□□□□□ -0.53
VTI1B-204ENST00000554659 LINC00469Q8N7U9 141 aa11.74□□□□□ -0.53
VTI1B-204ENST00000554659 RNASEH2CQ8TDP1 164 aaKnown RBP11.74□□□□□ -0.53
VTI1B-204ENST00000554659 LAMTOR2Q9Y2Q5 125 aa11.74□□□□□ -0.53
VTI1B-204ENST00000554659 A0A087WV48 116 aa11.74□□□□□ -0.53
VTI1B-204ENST00000554659 A0A1B0GUT8 65 aa11.74□□□□□ -0.53
VTI1B-204ENST00000554659 ATP5LO75964 103 aa11.74□□□□□ -0.53
VTI1B-204ENST00000554659 CELA3AP09093 270 aa11.74□□□□□ -0.53
VTI1B-204ENST00000554659 ZNF324BQ6AW86 544 aaPredicted RBP11.74□□□□□ -0.53
VTI1B-204ENST00000554659 FLVCR1-AS1Q8TAF5 88 aa11.74□□□□□ -0.53
VTI1B-204ENST00000554659 SCGB3A1Q96QR1 104 aa11.74□□□□□ -0.53
VTI1B-204ENST00000554659 IGLV3-32A0A0A0MS00 114 aa11.74□□□□□ -0.53
VTI1B-204ENST00000554659 IQCF6A8MYZ5 107 aa11.74□□□□□ -0.53
VTI1B-204ENST00000554659 UBE2CO00762 179 aa11.74□□□□□ -0.53
VTI1B-204ENST00000554659 LINC00614P0C842 121 aa11.74□□□□□ -0.53
VTI1B-204ENST00000554659 GPR183P32249 361 aa11.74□□□□□ -0.53
VTI1B-204ENST00000554659 ZNF837Q96EG3 531 aaPredicted RBP11.74□□□□□ -0.53
VTI1B-204ENST00000554659 IMMP1LQ96LU5 166 aa11.74□□□□□ -0.53
VTI1B-204ENST00000554659 NPFFO15130 113 aa11.73□□□□□ -0.53
VTI1B-204ENST00000554659 ATXN7O15265 892 aaPredicted RBP11.73□□□□□ -0.53
VTI1B-204ENST00000554659 LYZL4Q96KX0 146 aa11.73□□□□□ -0.53
VTI1B-204ENST00000554659 ATP1A1-AS1Q5TC04 95 aa11.73□□□□□ -0.53
VTI1B-204ENST00000554659 BEND2Q8NDZ0 799 aa11.73□□□□□ -0.53
VTI1B-204ENST00000554659 CEACAM4O75871 244 aa11.73□□□□□ -0.53
VTI1B-204ENST00000554659 ID3Q02535 119 aa11.73□□□□□ -0.53
VTI1B-204ENST00000554659 WDR82Q6UXN9 313 aa11.73□□□□□ -0.53
VTI1B-204ENST00000554659 OR52E5Q8NH55 327 aa11.73□□□□□ -0.53
VTI1B-204ENST00000554659 WNK3Q9BYP7 1800 aa11.73□□□□□ -0.53
VTI1B-204ENST00000554659 IGKV1D-13A0A0B4J2D9 117 aa11.73□□□□□ -0.53
VTI1B-204ENST00000554659 IGKV1-13P0DP09 117 aa11.73□□□□□ -0.53
VTI1B-204ENST00000554659 MIR17HGQ75NE6 70 aa11.73□□□□□ -0.53
VTI1B-204ENST00000554659 TEX45Q8NA69 505 aa11.73□□□□□ -0.53
VTI1B-204ENST00000554659 VWCEQ96DN2 955 aa11.73□□□□□ -0.53
VTI1B-204ENST00000554659 TMEM262E9PQX1 116 aa11.73□□□□□ -0.53
VTI1B-204ENST00000554659 PSG7Q13046 419 aa11.73□□□□□ -0.53
VTI1B-204ENST00000554659 NUDT10Q8NFP7 164 aa11.73□□□□□ -0.53
VTI1B-204ENST00000554659 PLPPR1Q8TBJ4 325 aa11.73□□□□□ -0.53
VTI1B-204ENST00000554659 WBP1Q96G27 269 aa11.73□□□□□ -0.53
VTI1B-204ENST00000554659 BRCA1P38398 1863 aaKnown RBP11.72□□□□□ -0.53
VTI1B-204ENST00000554659 TRAV8-2A0A0B4J237 113 aa11.72□□□□□ -0.53
VTI1B-204ENST00000554659 MRPL14Q6P1L8 145 aaKnown RBP11.72□□□□□ -0.53
VTI1B-204ENST00000554659 NDUFAF3Q9BU61 184 aa11.72□□□□□ -0.53
VTI1B-204ENST00000554659 TMEM50AO95807 157 aa11.72□□□□□ -0.53
VTI1B-204ENST00000554659 SFTA2Q6UW10 78 aa11.72□□□□□ -0.53
VTI1B-204ENST00000554659 TMEM144Q7Z5S9 345 aa11.72□□□□□ -0.53
VTI1B-204ENST00000554659 MDC1Q14676 2089 aaKnown RBP11.72□□□□□ -0.53
VTI1B-204ENST00000554659 CCL20P78556 96 aa11.72□□□□□ -0.53
VTI1B-204ENST00000554659 OR5AN1Q8NGI8 311 aa11.72□□□□□ -0.53
VTI1B-204ENST00000554659 TMEM106BQ9NUM4 274 aa11.72□□□□□ -0.53
VTI1B-204ENST00000554659 AHCTF1Q8WYP5 2266 aa11.72□□□□□ -0.53
VTI1B-204ENST00000554659 C5orf30Q96GV9 206 aa11.72□□□□□ -0.53
VTI1B-204ENST00000554659 DUX5Q96PT3 197 aa11.72□□□□□ -0.53
VTI1B-204ENST00000554659 CD5P06127 495 aa11.71□□□□□ -0.53
VTI1B-204ENST00000554659 CIARTQ8N365 385 aaPredicted RBP11.71□□□□□ -0.53
VTI1B-204ENST00000554659 PSME4Q14997 1843 aa11.71□□□□□ -0.53
VTI1B-204ENST00000554659 A0A0A6YYD4 124 aa11.71□□□□□ -0.53
VTI1B-204ENST00000554659 IGHV2OR16-5A0A0B4J2B6 119 aa11.71□□□□□ -0.53
VTI1B-204ENST00000554659 SERF1AO75920 110 aa11.71□□□□□ -0.53
VTI1B-204ENST00000554659 LY6EQ16553 131 aa11.71□□□□□ -0.53
VTI1B-204ENST00000554659 A0A0G2JMM0 328 aa11.71□□□□□ -0.54
VTI1B-204ENST00000554659 A0A1W2PPB8 328 aa11.71□□□□□ -0.54
VTI1B-204ENST00000554659 A0A1W2PRS3 328 aa11.71□□□□□ -0.54
VTI1B-204ENST00000554659 KIR3DP1A8MWS1 328 aa11.71□□□□□ -0.54
VTI1B-204ENST00000554659 HIST1H2BKO60814 126 aa11.71□□□□□ -0.54
VTI1B-204ENST00000554659 HIST1H2BJP06899 126 aa11.71□□□□□ -0.54
VTI1B-204ENST00000554659 HIST1H2BOP23527 126 aa11.71□□□□□ -0.54
VTI1B-204ENST00000554659 HIST1H2BBP33778 126 aa11.71□□□□□ -0.54
VTI1B-204ENST00000554659 HIST1H2BDP58876 126 aa11.71□□□□□ -0.54
VTI1B-204ENST00000554659 HIST1H2BCP62807 126 aa11.71□□□□□ -0.54
VTI1B-204ENST00000554659 HIST2H2BEQ16778 126 aa11.71□□□□□ -0.54
VTI1B-204ENST00000554659 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.71□□□□□ -0.54
VTI1B-204ENST00000554659 OR5A1Q8NGJ0 315 aa11.71□□□□□ -0.54
VTI1B-204ENST00000554659 HIST1H2BHQ93079 126 aa11.71□□□□□ -0.54
VTI1B-204ENST00000554659 HIST1H2BNQ99877 126 aa11.71□□□□□ -0.54
VTI1B-204ENST00000554659 HIST1H2BMQ99879 126 aa11.71□□□□□ -0.54
VTI1B-204ENST00000554659 NRN1Q9NPD7 142 aa11.71□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms