RNA–Protein interactions for RNA: ENST00000554584.5

SYNE2-212, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 5 BASIC

Gene SYNE2, Length 20,508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-212ENST00000554584 TRAV40A0A0B4J280 105 aa2.82□□□□□ -1.96
SYNE2-212ENST00000554584 H0YL77 283 aa2.82□□□□□ -1.96
SYNE2-212ENST00000554584 ATP5LO75964 103 aa2.82□□□□□ -1.96
SYNE2-212ENST00000554584 HIST1H1BP16401 226 aaKnown RBP2.82□□□□□ -1.96
SYNE2-212ENST00000554584 MDH2P40926 338 aaKnown RBP2.82□□□□□ -1.96
SYNE2-212ENST00000554584 PRR4Q16378 134 aa2.82□□□□□ -1.96
SYNE2-212ENST00000554584 LINC00303Q3SY05 128 aa2.82□□□□□ -1.96
SYNE2-212ENST00000554584 TMEM229BQ8NBD8 167 aa2.82□□□□□ -1.96
SYNE2-212ENST00000554584 F8VVB4 439 aa2.81□□□□□ -1.96
SYNE2-212ENST00000554584 F8VWA3 439 aa2.81□□□□□ -1.96
SYNE2-212ENST00000554584 ERVH48-1M5A8F1 160 aa2.81□□□□□ -1.96
SYNE2-212ENST00000554584 LINC00614P0C842 121 aa2.81□□□□□ -1.96
SYNE2-212ENST00000554584 CRYBB3P26998 211 aa2.81□□□□□ -1.96
SYNE2-212ENST00000554584 ABHD17AQ96GS6 310 aa2.81□□□□□ -1.96
SYNE2-212ENST00000554584 MBNL3Q9NUK0 354 aaKnown RBP2.81□□□□□ -1.96
SYNE2-212ENST00000554584 Q9Y3F1 56 aa2.81□□□□□ -1.96
SYNE2-212ENST00000554584 CLDN16Q9Y5I7 305 aa2.81□□□□□ -1.96
SYNE2-212ENST00000554584 J3QR06 171 aa2.81□□□□□ -1.96
SYNE2-212ENST00000554584 SYNGR1O43759 233 aa2.81□□□□□ -1.96
SYNE2-212ENST00000554584 MOSPD3O75425 235 aa2.81□□□□□ -1.96
SYNE2-212ENST00000554584 SAA2P0DJI9 122 aaPredicted RBP2.81□□□□□ -1.96
SYNE2-212ENST00000554584 PLAC1Q9HBJ0 212 aa2.81□□□□□ -1.96
SYNE2-212ENST00000554584 TRAV8-2A0A0B4J237 113 aa2.81□□□□□ -1.96
SYNE2-212ENST00000554584 C9orf170A2RU37 121 aa2.81□□□□□ -1.96
SYNE2-212ENST00000554584 H3BQ15 152 aa2.81□□□□□ -1.96
SYNE2-212ENST00000554584 XAF1Q6GPH4 301 aa2.81□□□□□ -1.96
SYNE2-212ENST00000554584 Q6Q795 121 aa2.81□□□□□ -1.96
SYNE2-212ENST00000554584 DRAM1Q8N682 238 aa2.81□□□□□ -1.96
SYNE2-212ENST00000554584 C19orf53Q9UNZ5 99 aaPredicted RBP2.81□□□□□ -1.96
SYNE2-212ENST00000554584 SYNGR3O43761 229 aa2.81□□□□□ -1.96
SYNE2-212ENST00000554584 CD28P10747 220 aa2.81□□□□□ -1.96
SYNE2-212ENST00000554584 PAX1P15863 534 aa2.81□□□□□ -1.96
SYNE2-212ENST00000554584 ACSF3Q4G176 576 aaPredicted RBP2.81□□□□□ -1.96
SYNE2-212ENST00000554584 EEF1AKMT3Q96AZ1 226 aa2.81□□□□□ -1.96
SYNE2-212ENST00000554584 NRAPQ86VF7 1730 aa2.81□□□□□ -1.96
SYNE2-212ENST00000554584 ZFPL1O95159 310 aa2.81□□□□□ -1.96
SYNE2-212ENST00000554584 PRDX2P32119 198 aa2.81□□□□□ -1.96
SYNE2-212ENST00000554584 TNFRSF14Q92956 283 aa2.81□□□□□ -1.96
SYNE2-212ENST00000554584 SLC25A33Q9BSK2 321 aa2.81□□□□□ -1.96
SYNE2-212ENST00000554584 SLC25A15Q9Y619 301 aa2.81□□□□□ -1.96
SYNE2-212ENST00000554584 TMEM131Q92545 1883 aa2.81□□□□□ -1.96
SYNE2-212ENST00000554584 FN1P02751 2386 aaKnown RBP2.81□□□□□ -1.96
SYNE2-212ENST00000554584 PPIAL4CA0A0B4J2A2 164 aa2.81□□□□□ -1.96
SYNE2-212ENST00000554584 CTDSPLO15194 276 aa2.81□□□□□ -1.96
SYNE2-212ENST00000554584 IGKV1D-12P01611 117 aa2.81□□□□□ -1.96
SYNE2-212ENST00000554584 PPIAL4GP0DN37 164 aa2.81□□□□□ -1.96
SYNE2-212ENST00000554584 SYNJ2BPP57105 145 aa2.81□□□□□ -1.96
SYNE2-212ENST00000554584 FUNDC1Q8IVP5 155 aa2.81□□□□□ -1.96
SYNE2-212ENST00000554584 CLDN34H7C241 214 aa2.81□□□□□ -1.96
SYNE2-212ENST00000554584 HMGN4O00479 90 aa2.81□□□□□ -1.96
SYNE2-212ENST00000554584 NPPCP23582 126 aa2.81□□□□□ -1.96
SYNE2-212ENST00000554584 FAM110AQ9BQ89 295 aa2.81□□□□□ -1.96
SYNE2-212ENST00000554584 LTBP4Q8N2S1 1624 aa2.81□□□□□ -1.96
SYNE2-212ENST00000554584 MAST2Q6P0Q8 1798 aa2.81□□□□□ -1.96
SYNE2-212ENST00000554584 ADAMTSL4Q6UY14 1074 aa2.81□□□□□ -1.96
SYNE2-212ENST00000554584 LRRK2Q5S007 2527 aa2.81□□□□□ -1.96
SYNE2-212ENST00000554584 FHITP49789 147 aa2.81□□□□□ -1.96
SYNE2-212ENST00000554584 OR2A5Q96R48 311 aa2.81□□□□□ -1.96
SYNE2-212ENST00000554584 RFPL3SP0C7P2 107 aa2.81□□□□□ -1.96
SYNE2-212ENST00000554584 MORN4Q8NDC4 146 aa2.81□□□□□ -1.96
SYNE2-212ENST00000554584 RBBP6Q7Z6E9 1792 aaKnown RBP2.81□□□□□ -1.96
SYNE2-212ENST00000554584 NLRC5Q86WI3 1866 aa2.81□□□□□ -1.96
SYNE2-212ENST00000554584 EGR3Q06889 387 aa2.81□□□□□ -1.96
SYNE2-212ENST00000554584 GAB4Q2WGN9 574 aa2.81□□□□□ -1.96
SYNE2-212ENST00000554584 OCIAD2Q56VL3 154 aa2.81□□□□□ -1.96
SYNE2-212ENST00000554584 TMEM174Q8WUU8 243 aa2.81□□□□□ -1.96
SYNE2-212ENST00000554584 TMEM70Q9BUB7 260 aa2.81□□□□□ -1.96
SYNE2-212ENST00000554584 TRAV1-2A0A0B4J238 106 aa2.81□□□□□ -1.96
SYNE2-212ENST00000554584 C19orf67A6NJJ6 358 aa2.81□□□□□ -1.96
SYNE2-212ENST00000554584 C11orf94C9JXX5 98 aa2.81□□□□□ -1.96
SYNE2-212ENST00000554584 IGFBP3P17936 291 aaPredicted RBP2.81□□□□□ -1.96
SYNE2-212ENST00000554584 FOXG1P55316 489 aaPredicted RBP2.81□□□□□ -1.96
SYNE2-212ENST00000554584 ORAOV1Q8WV07 137 aa2.81□□□□□ -1.96
SYNE2-212ENST00000554584 SLC25A39Q9BZJ4 359 aaPredicted RBP2.81□□□□□ -1.96
SYNE2-212ENST00000554584 LINC00587B1AMM8 73 aa2.81□□□□□ -1.96
SYNE2-212ENST00000554584 FGF12P61328 243 aa2.81□□□□□ -1.96
SYNE2-212ENST00000554584 RNF133Q8WVZ7 376 aa2.81□□□□□ -1.96
SYNE2-212ENST00000554584 SMIM19Q96E16 107 aa2.81□□□□□ -1.96
SYNE2-212ENST00000554584 MCRIP2Q9BUT9 160 aaKnown RBP2.81□□□□□ -1.96
SYNE2-212ENST00000554584 NPIPB13A6NJU9 1138 aa2.81□□□□□ -1.96
SYNE2-212ENST00000554584 NPIPB5A8MRT5 1133 aa2.81□□□□□ -1.96
SYNE2-212ENST00000554584 NPIPB4C9JG80 1138 aa2.81□□□□□ -1.96
SYNE2-212ENST00000554584 PLPP2O43688 288 aa2.81□□□□□ -1.96
SYNE2-212ENST00000554584 DEFB136Q30KP8 78 aa2.81□□□□□ -1.96
SYNE2-212ENST00000554584 ANAPC16Q96DE5 110 aa2.81□□□□□ -1.96
SYNE2-212ENST00000554584 A0A0J9YW62 118 aa2.81□□□□□ -1.96
SYNE2-212ENST00000554584 C7orf77A4D0Y5 90 aa2.81□□□□□ -1.96
SYNE2-212ENST00000554584 AWAT1Q58HT5 328 aa2.81□□□□□ -1.96
SYNE2-212ENST00000554584 SLC48A1Q6P1K1 146 aa2.81□□□□□ -1.96
SYNE2-212ENST00000554584 STPG3Q8N7X2 389 aa2.81□□□□□ -1.96
SYNE2-212ENST00000554584 LRRC37A3O60309 1634 aa2.81□□□□□ -1.96
SYNE2-212ENST00000554584 SMIM13P0DJ93 91 aa2.81□□□□□ -1.96
SYNE2-212ENST00000554584 IFITM2Q01629 132 aa2.81□□□□□ -1.96
SYNE2-212ENST00000554584 FAM53BQ14153 422 aa2.81□□□□□ -1.96
SYNE2-212ENST00000554584 ZIC1Q15915 447 aa2.81□□□□□ -1.96
SYNE2-212ENST00000554584 ATOH8Q96SQ7 321 aa2.81□□□□□ -1.96
SYNE2-212ENST00000554584 SCRT1Q9BWW7 348 aa2.81□□□□□ -1.96
SYNE2-212ENST00000554584 TTTY12Q9BZ98 90 aa2.81□□□□□ -1.96
SYNE2-212ENST00000554584 FAM206AQ9NX38 181 aa2.81□□□□□ -1.96
SYNE2-212ENST00000554584 ANAPC1Q9H1A4 1944 aa2.8□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms