RNA–Protein interactions for RNA: ENST00000553950.5

SHMT2-210, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-210ENST00000553950 TRAV14DV4A0A0A6YYC5 116 aa11.44□□□□□ -0.58
SHMT2-210ENST00000553950 CGB1A6NKQ9 187 aa11.44□□□□□ -0.58
SHMT2-210ENST00000553950 NDUFA7O95182 113 aa11.44□□□□□ -0.58
SHMT2-210ENST00000553950 OR8U8P0C7N1 319 aa11.44□□□□□ -0.58
SHMT2-210ENST00000553950 MYOD1P15172 320 aa11.44□□□□□ -0.58
SHMT2-210ENST00000553950 HIST1H1BP16401 226 aaKnown RBP11.44□□□□□ -0.58
SHMT2-210ENST00000553950 BLCAPP62952 87 aa11.44□□□□□ -0.58
SHMT2-210ENST00000553950 WT1-ASQ06250 92 aa11.44□□□□□ -0.58
SHMT2-210ENST00000553950 BSXQ3C1V8 233 aa11.44□□□□□ -0.58
SHMT2-210ENST00000553950 C2orf83Q53S99 150 aa11.44□□□□□ -0.58
SHMT2-210ENST00000553950 TTC9CQ8N5M4 171 aa11.44□□□□□ -0.58
SHMT2-210ENST00000553950 OR1P1Q8NH06 330 aa11.44□□□□□ -0.58
SHMT2-210ENST00000553950 WDR89Q96FK6 387 aaPredicted RBP11.44□□□□□ -0.58
SHMT2-210ENST00000553950 HYLS1Q96M11 299 aa11.44□□□□□ -0.58
SHMT2-210ENST00000553950 THYN1Q9P016 225 aa11.44□□□□□ -0.58
SHMT2-210ENST00000553950 F11RQ9Y624 299 aaKnown RBP11.44□□□□□ -0.58
SHMT2-210ENST00000553950 HMSDA8MTL9 139 aa11.43□□□□□ -0.58
SHMT2-210ENST00000553950 CRYGCP07315 174 aa11.43□□□□□ -0.58
SHMT2-210ENST00000553950 DEFA4P12838 97 aa11.43□□□□□ -0.58
SHMT2-210ENST00000553950 CTRB1P17538 263 aa11.43□□□□□ -0.58
SHMT2-210ENST00000553950 HBG1P69891 147 aa11.43□□□□□ -0.58
SHMT2-210ENST00000553950 HBG2P69892 147 aa11.43□□□□□ -0.58
SHMT2-210ENST00000553950 EXOSC2Q13868 293 aaKnown RBP11.43□□□□□ -0.58
SHMT2-210ENST00000553950 SPANXN5Q5MJ07 72 aa11.43□□□□□ -0.58
SHMT2-210ENST00000553950 CTRB2Q6GPI1 263 aa11.43□□□□□ -0.58
SHMT2-210ENST00000553950 TMEM65Q6PI78 240 aa11.43□□□□□ -0.58
SHMT2-210ENST00000553950 STPG2Q8N412 459 aa11.43□□□□□ -0.58
SHMT2-210ENST00000553950 LFNGQ8NES3 379 aa11.43□□□□□ -0.58
SHMT2-210ENST00000553950 OR10W1Q8NGF6 305 aa11.43□□□□□ -0.58
SHMT2-210ENST00000553950 OR4F5Q8NH21 305 aa11.43□□□□□ -0.58
SHMT2-210ENST00000553950 RNASEH2CQ8TDP1 164 aaKnown RBP11.43□□□□□ -0.58
SHMT2-210ENST00000553950 FAM103A1Q9BTL3 118 aaKnown RBP11.43□□□□□ -0.58
SHMT2-210ENST00000553950 C11orf1Q9H5F2 150 aa11.43□□□□□ -0.58
SHMT2-210ENST00000553950 ZC4H2Q9NQZ6 224 aa11.43□□□□□ -0.58
SHMT2-210ENST00000553950 OR5AC2Q9NZP5 309 aa11.43□□□□□ -0.58
SHMT2-210ENST00000553950 A0A1B0GW64 132 aa11.42□□□□□ -0.58
SHMT2-210ENST00000553950 RPS10-NUDT3A0A1W2PQS6 291 aa11.42□□□□□ -0.58
SHMT2-210ENST00000553950 TMEM89A2RUT3 159 aa11.42□□□□□ -0.58
SHMT2-210ENST00000553950 SH2D7A6NKC9 451 aaPredicted RBP11.42□□□□□ -0.58
SHMT2-210ENST00000553950 E7EUB6 86 aa11.42□□□□□ -0.58
SHMT2-210ENST00000553950 H3BP45 60 aa11.42□□□□□ -0.58
SHMT2-210ENST00000553950 FBXO24O75426 580 aa11.42□□□□□ -0.58
SHMT2-210ENST00000553950 BRI3O95415 125 aa11.42□□□□□ -0.58
SHMT2-210ENST00000553950 RNASE2P10153 161 aaKnown RBP11.42□□□□□ -0.58
SHMT2-210ENST00000553950 AREGP15514 252 aa11.42□□□□□ -0.58
SHMT2-210ENST00000553950 ZNF345Q14585 488 aa11.42□□□□□ -0.58
SHMT2-210ENST00000553950 ZNF546Q86UE3 836 aa11.42□□□□□ -0.58
SHMT2-210ENST00000553950 COMMD1Q8N668 190 aa11.42□□□□□ -0.58
SHMT2-210ENST00000553950 PINX1Q96BK5 328 aaKnown RBP11.42□□□□□ -0.58
SHMT2-210ENST00000553950 AQP10Q96PS8 301 aa11.42□□□□□ -0.58
SHMT2-210ENST00000553950 C16orf95Q9H693 158 aa11.42□□□□□ -0.58
SHMT2-210ENST00000553950 FBXO7Q9Y3I1 522 aa11.42□□□□□ -0.58
SHMT2-210ENST00000553950 A0A1B0GUS0 222 aa11.41□□□□□ -0.58
SHMT2-210ENST00000553950 G3V3Q6 166 aa11.41□□□□□ -0.58
SHMT2-210ENST00000553950 H0YIZ8 118 aa11.41□□□□□ -0.58
SHMT2-210ENST00000553950 IFNA4P05014 189 aa11.41□□□□□ -0.58
SHMT2-210ENST00000553950 EGR2P11161 476 aaPredicted RBP11.41□□□□□ -0.58
SHMT2-210ENST00000553950 C4BPBP20851 252 aa11.41□□□□□ -0.58
SHMT2-210ENST00000553950 SULT1A1P50225 295 aa11.41□□□□□ -0.58
SHMT2-210ENST00000553950 C19orf54Q5BKX5 351 aa11.41□□□□□ -0.58
SHMT2-210ENST00000553950 ETFRF1Q6IPR1 90 aa11.41□□□□□ -0.58
SHMT2-210ENST00000553950 TMEM14EPQ6UXP3 125 aa11.41□□□□□ -0.58
SHMT2-210ENST00000553950 Q6ZSV7 163 aa11.41□□□□□ -0.58
SHMT2-210ENST00000553950 OR10P1Q8NGE3 313 aa11.41□□□□□ -0.58
SHMT2-210ENST00000553950 P2RX4Q99571 388 aa11.41□□□□□ -0.58
SHMT2-210ENST00000553950 RNF126Q9BV68 326 aa11.41□□□□□ -0.58
SHMT2-210ENST00000553950 SLA2Q9H6Q3 261 aa11.41□□□□□ -0.58
SHMT2-210ENST00000553950 PAIP2BQ9ULR5 123 aaKnown RBP11.41□□□□□ -0.58
SHMT2-210ENST00000553950 TNFSF18Q9UNG2 199 aa11.41□□□□□ -0.58
SHMT2-210ENST00000553950 PSMB11A5LHX3 300 aa11.4□□□□□ -0.58
SHMT2-210ENST00000553950 C15orf62A8K5M9 175 aa11.4□□□□□ -0.58
SHMT2-210ENST00000553950 SCGB2A1O75556 95 aa11.4□□□□□ -0.58
SHMT2-210ENST00000553950 REG1AP05451 166 aa11.4□□□□□ -0.58
SHMT2-210ENST00000553950 RPL12P30050 165 aaKnown RBP11.4□□□□□ -0.58
SHMT2-210ENST00000553950 PAX9P55771 341 aa11.4□□□□□ -0.58
SHMT2-210ENST00000553950 OR2F1Q13607 317 aa11.4□□□□□ -0.58
SHMT2-210ENST00000553950 FAM209BQ5JX69 171 aa11.4□□□□□ -0.58
SHMT2-210ENST00000553950 ASPHD1Q5U4P2 390 aa11.4□□□□□ -0.58
SHMT2-210ENST00000553950 ACOT7LQ6ZUV0 252 aa11.4□□□□□ -0.58
SHMT2-210ENST00000553950 TMEM252Q8N6L7 170 aa11.4□□□□□ -0.58
SHMT2-210ENST00000553950 GGACTQ9BVM4 153 aa11.4□□□□□ -0.58
SHMT2-210ENST00000553950 ZFHX3Q15911 3703 aa11.39□□□□□ -0.59
SHMT2-210ENST00000553950 A0A0D9SG52 128 aa11.39□□□□□ -0.59
SHMT2-210ENST00000553950 FAM223BA6NKX1 122 aa11.39□□□□□ -0.59
SHMT2-210ENST00000553950 FNDC10F2Z333 226 aa11.39□□□□□ -0.59
SHMT2-210ENST00000553950 SMLR1H3BR10 107 aa11.39□□□□□ -0.59
SHMT2-210ENST00000553950 ARPC5O15511 151 aa11.39□□□□□ -0.59
SHMT2-210ENST00000553950 TMEM50AO95807 157 aa11.39□□□□□ -0.59
SHMT2-210ENST00000553950 APELAP0DMC3 54 aa11.39□□□□□ -0.59
SHMT2-210ENST00000553950 EWSR1Q01844 656 aaKnown RBP eCLIP11.39□□□□□ -0.59
SHMT2-210ENST00000553950 KLK9Q2XQG4 91 aa11.39□□□□□ -0.59
SHMT2-210ENST00000553950 PVRIGQ6DKI7 326 aa11.39□□□□□ -0.59
SHMT2-210ENST00000553950 ETV3LQ6ZN32 361 aa11.39□□□□□ -0.59
SHMT2-210ENST00000553950 FAM223AQ8IWN6 122 aa11.39□□□□□ -0.59
SHMT2-210ENST00000553950 LILRB2Q8N423 598 aa11.39□□□□□ -0.59
SHMT2-210ENST00000553950 OR4C12Q96R67 309 aa11.39□□□□□ -0.59
SHMT2-210ENST00000553950 WNT10AQ9GZT5 417 aa11.39□□□□□ -0.59
SHMT2-210ENST00000553950 MFFQ9GZY8 342 aa11.39□□□□□ -0.59
SHMT2-210ENST00000553950 KLK9Q9UKQ9 250 aa11.39□□□□□ -0.59
SHMT2-210ENST00000553950 HSPB11Q9Y547 144 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms