RNA–Protein interactions for RNA: ENST00000553693.5

SCFD1-210, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-210ENST00000553693 PPP1R2P41236 205 aa1.78□□□□□ -2.12
SCFD1-210ENST00000553693 TGM4P49221 684 aa1.78□□□□□ -2.12
SCFD1-210ENST00000553693 RPL14P50914 215 aaKnown RBP1.78□□□□□ -2.12
SCFD1-210ENST00000553693 DEFA6Q01524 100 aa1.78□□□□□ -2.12
SCFD1-210ENST00000553693 PLGLB1Q02325 96 aa1.78□□□□□ -2.12
SCFD1-210ENST00000553693 ZNF616Q08AN1 781 aa1.78□□□□□ -2.12
SCFD1-210ENST00000553693 LGALSLQ3ZCW2 172 aaPredicted RBP1.78□□□□□ -2.12
SCFD1-210ENST00000553693 CCSMST1Q4G0I0 132 aa1.78□□□□□ -2.12
SCFD1-210ENST00000553693 NCBP2-AS2Q69YL0 99 aa1.78□□□□□ -2.12
SCFD1-210ENST00000553693 ELP2Q6IA86 826 aa1.78□□□□□ -2.12
SCFD1-210ENST00000553693 SPINT4Q6UDR6 99 aa1.78□□□□□ -2.12
SCFD1-210ENST00000553693 FAM131AQ6UXB0 335 aa1.78□□□□□ -2.12
SCFD1-210ENST00000553693 TCF23Q7RTU1 214 aa1.78□□□□□ -2.12
SCFD1-210ENST00000553693 AMN1Q8IY45 258 aa1.78□□□□□ -2.12
SCFD1-210ENST00000553693 MUC15Q8N387 334 aa1.78□□□□□ -2.12
SCFD1-210ENST00000553693 Q8N402 240 aa1.78□□□□□ -2.12
SCFD1-210ENST00000553693 LINC00337Q8N6G1 96 aa1.78□□□□□ -2.12
SCFD1-210ENST00000553693 OR5D18Q8NGL1 313 aa1.78□□□□□ -2.12
SCFD1-210ENST00000553693 OR11L1Q8NGX0 322 aa1.78□□□□□ -2.12
SCFD1-210ENST00000553693 OR8S1Q8NH09 359 aa1.78□□□□□ -2.12
SCFD1-210ENST00000553693 GALMQ96C23 342 aa1.78□□□□□ -2.12
SCFD1-210ENST00000553693 FXYD5Q96DB9 178 aa1.78□□□□□ -2.12
SCFD1-210ENST00000553693 SMIM19Q96E16 107 aa1.78□□□□□ -2.12
SCFD1-210ENST00000553693 DCUN1D1Q96GG9 259 aa1.78□□□□□ -2.12
SCFD1-210ENST00000553693 PACRGQ96M98 296 aaPredicted RBP1.78□□□□□ -2.12
SCFD1-210ENST00000553693 CCL19Q99731 98 aa1.78□□□□□ -2.12
SCFD1-210ENST00000553693 GABARAPL1Q9H0R8 117 aa1.78□□□□□ -2.12
SCFD1-210ENST00000553693 METTL17Q9H7H0 456 aaPredicted RBP1.78□□□□□ -2.12
SCFD1-210ENST00000553693 CA10Q9NS85 328 aa1.78□□□□□ -2.12
SCFD1-210ENST00000553693 PARVAQ9NVD7 372 aa1.78□□□□□ -2.12
SCFD1-210ENST00000553693 C14orf105Q9NVL8 296 aa1.78□□□□□ -2.12
SCFD1-210ENST00000553693 ARL5AQ9Y689 179 aa1.78□□□□□ -2.12
SCFD1-210ENST00000553693 SVEP1Q4LDE5 3571 aa1.77□□□□□ -2.13
SCFD1-210ENST00000553693 IGHV3-21A0A0B4J1V1 117 aa1.77□□□□□ -2.13
SCFD1-210ENST00000553693 IGLL5B9A064 214 aa1.77□□□□□ -2.13
SCFD1-210ENST00000553693 EEF1E1-BLOC1S5C9J1V9 151 aa1.77□□□□□ -2.13
SCFD1-210ENST00000553693 H0Y980 276 aa1.77□□□□□ -2.13
SCFD1-210ENST00000553693 COPEO14579 308 aa1.77□□□□□ -2.13
SCFD1-210ENST00000553693 EEF1E1O43324 174 aaKnown RBP1.77□□□□□ -2.13
SCFD1-210ENST00000553693 BRI3O95415 125 aa1.77□□□□□ -2.13
SCFD1-210ENST00000553693 EPPINO95925 133 aa1.77□□□□□ -2.13
SCFD1-210ENST00000553693 LHBP01229 141 aa1.77□□□□□ -2.13
SCFD1-210ENST00000553693 GYPCP04921 128 aa1.77□□□□□ -2.13
SCFD1-210ENST00000553693 GABRA1P14867 456 aa1.77□□□□□ -2.13
SCFD1-210ENST00000553693 PRPS1L1P21108 318 aa1.77□□□□□ -2.13
SCFD1-210ENST00000553693 CCR7P32248 378 aa1.77□□□□□ -2.13
SCFD1-210ENST00000553693 RAP1GDS1P52306 607 aa1.77□□□□□ -2.13
SCFD1-210ENST00000553693 AKR1C2P52895 323 aa1.77□□□□□ -2.13
SCFD1-210ENST00000553693 OR4D2P58180 307 aa1.77□□□□□ -2.13
SCFD1-210ENST00000553693 DAD1P61803 113 aa1.77□□□□□ -2.13
SCFD1-210ENST00000553693 BTG2P78543 158 aa1.77□□□□□ -2.13
SCFD1-210ENST00000553693 FMODQ06828 376 aa1.77□□□□□ -2.13
SCFD1-210ENST00000553693 ENDOGQ14249 297 aaKnown RBP1.77□□□□□ -2.13
SCFD1-210ENST00000553693 CDKL4Q5MAI5 379 aa1.77□□□□□ -2.13
SCFD1-210ENST00000553693 C6orf52Q5T4I8 152 aa1.77□□□□□ -2.13
SCFD1-210ENST00000553693 ZFAND6Q6FIF0 208 aa1.77□□□□□ -2.13
SCFD1-210ENST00000553693 TNFAIP8L2Q6P589 184 aaPredicted RBP1.77□□□□□ -2.13
SCFD1-210ENST00000553693 GLT6D1Q7Z4J2 308 aa1.77□□□□□ -2.13
SCFD1-210ENST00000553693 DCXRQ7Z4W1 244 aa1.77□□□□□ -2.13
SCFD1-210ENST00000553693 SLC35G3Q8N808 338 aa1.77□□□□□ -2.13
SCFD1-210ENST00000553693 SPANXA2-OT1Q8N9U9 137 aa1.77□□□□□ -2.13
SCFD1-210ENST00000553693 ST20-AS1Q8NBB2 130 aa1.77□□□□□ -2.13
SCFD1-210ENST00000553693 PLPP5Q8NEB5 264 aa1.77□□□□□ -2.13
SCFD1-210ENST00000553693 ZNF680Q8NEM1 530 aa1.77□□□□□ -2.13
SCFD1-210ENST00000553693 OR13C4Q8NGS5 318 aa1.77□□□□□ -2.13
SCFD1-210ENST00000553693 OR2K2Q8NGT1 345 aa1.77□□□□□ -2.13
SCFD1-210ENST00000553693 MFSD8Q8NHS3 518 aa1.77□□□□□ -2.13
SCFD1-210ENST00000553693 TSLPQ969D9 159 aa1.77□□□□□ -2.13
SCFD1-210ENST00000553693 TESCQ96BS2 214 aa1.77□□□□□ -2.13
SCFD1-210ENST00000553693 PAIP2Q9BPZ3 127 aaKnown RBP1.77□□□□□ -2.13
SCFD1-210ENST00000553693 MED18Q9BUE0 208 aa1.77□□□□□ -2.13
SCFD1-210ENST00000553693 MROQ9BYG7 248 aa1.77□□□□□ -2.13
SCFD1-210ENST00000553693 POTEKPQ9BYX7 375 aa1.77□□□□□ -2.13
SCFD1-210ENST00000553693 TTTY12Q9BZ98 90 aa1.77□□□□□ -2.13
SCFD1-210ENST00000553693 TXNIPQ9H3M7 391 aa1.77□□□□□ -2.13
SCFD1-210ENST00000553693 TRABDQ9H4I3 376 aa1.77□□□□□ -2.13
SCFD1-210ENST00000553693 TMEM38BQ9NVV0 291 aa1.77□□□□□ -2.13
SCFD1-210ENST00000553693 FIS1Q9Y3D6 152 aa1.77□□□□□ -2.13
SCFD1-210ENST00000553693 TBL2Q9Y4P3 447 aaKnown RBP1.77□□□□□ -2.13
SCFD1-210ENST00000553693 HEY1Q9Y5J3 304 aa1.77□□□□□ -2.13
SCFD1-210ENST00000553693 S4R3C0 116 aa1.77□□□□□ -2.13
SCFD1-210ENST00000553693 KIAA1549Q9HCM3 1950 aa1.77□□□□□ -2.13
SCFD1-210ENST00000553693 NOTCH1P46531 2555 aa1.77□□□□□ -2.13
SCFD1-210ENST00000553693 MGAM2Q2M2H8 2515 aa1.77□□□□□ -2.13
SCFD1-210ENST00000553693 VWFP04275 2813 aa1.76□□□□□ -2.13
SCFD1-210ENST00000553693 SNRNP200O75643 2136 aaKnown RBP1.76□□□□□ -2.13
SCFD1-210ENST00000553693 MPDZO75970 2070 aa1.76□□□□□ -2.13
SCFD1-210ENST00000553693 CR1P17927 2039 aa1.76□□□□□ -2.13
SCFD1-210ENST00000553693 A0A096LNT2 108 aa1.76□□□□□ -2.13
SCFD1-210ENST00000553693 TRGV5A0A0B4J1U4 118 aa1.76□□□□□ -2.13
SCFD1-210ENST00000553693 ZNF860A6NHJ4 632 aa1.76□□□□□ -2.13
SCFD1-210ENST00000553693 BIRC5O15392 142 aa1.76□□□□□ -2.13
SCFD1-210ENST00000553693 OR1I1O60431 355 aa1.76□□□□□ -2.13
SCFD1-210ENST00000553693 STK16O75716 305 aa1.76□□□□□ -2.13
SCFD1-210ENST00000553693 NSA2O95478 260 aaKnown RBP1.76□□□□□ -2.13
SCFD1-210ENST00000553693 TYMSP04818 313 aa1.76□□□□□ -2.13
SCFD1-210ENST00000553693 CRYBA1P05813 215 aa1.76□□□□□ -2.13
SCFD1-210ENST00000553693 COX5BP10606 129 aa1.76□□□□□ -2.13
SCFD1-210ENST00000553693 GABRA3P34903 492 aa1.76□□□□□ -2.13
SCFD1-210ENST00000553693 SLCO1A2P46721 670 aa1.76□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms