RNA–Protein interactions for RNA: ENST00000553529.5

SHMT2-206, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-206ENST00000553529 CXorf58Q96LI9 332 aa13.67□□□□□ -0.22
SHMT2-206ENST00000553529 PRR13Q9NZ81 148 aa13.67□□□□□ -0.22
SHMT2-206ENST00000553529 CD74P04233 296 aa13.66□□□□□ -0.22
SHMT2-206ENST00000553529 H2BFWTQ7Z2G1 175 aa13.66□□□□□ -0.22
SHMT2-206ENST00000553529 CITED4Q96RK1 184 aa13.66□□□□□ -0.22
SHMT2-206ENST00000553529 SRSF8Q9BRL6 282 aaKnown RBP13.66□□□□□ -0.22
SHMT2-206ENST00000553529 ZNF436Q9C0F3 470 aaPredicted RBP13.66□□□□□ -0.22
SHMT2-206ENST00000553529 TUBA4BQ9H853 241 aa13.66□□□□□ -0.22
SHMT2-206ENST00000553529 SRD5A3Q9H8P0 318 aa13.66□□□□□ -0.22
SHMT2-206ENST00000553529 PRNDQ9UKY0 176 aa13.66□□□□□ -0.22
SHMT2-206ENST00000553529 STARD9Q9P2P6 4700 aa13.65□□□□□ -0.22
SHMT2-206ENST00000553529 IGHV3-49A0A0A0MS15 119 aa13.65□□□□□ -0.22
SHMT2-206ENST00000553529 A0A0B4J293 547 aa13.65□□□□□ -0.22
SHMT2-206ENST00000553529 RAB3DO95716 219 aa13.65□□□□□ -0.22
SHMT2-206ENST00000553529 IFNA6P05013 189 aa13.65□□□□□ -0.22
SHMT2-206ENST00000553529 P0C879 139 aa13.65□□□□□ -0.22
SHMT2-206ENST00000553529 CASC10Q5T4H9 136 aa13.65□□□□□ -0.22
SHMT2-206ENST00000553529 OR2C3Q8N628 320 aa13.65□□□□□ -0.22
SHMT2-206ENST00000553529 TMEM229BQ8NBD8 167 aa13.65□□□□□ -0.22
SHMT2-206ENST00000553529 LHFPL5Q8TAF8 219 aa13.65□□□□□ -0.22
SHMT2-206ENST00000553529 MUC7Q8TAX7 377 aa13.65□□□□□ -0.22
SHMT2-206ENST00000553529 MISP3Q96FF7 219 aa13.65□□□□□ -0.22
SHMT2-206ENST00000553529 ZMAT4Q9H898 229 aa13.65□□□□□ -0.22
SHMT2-206ENST00000553529 EDA2RQ9HAV5 297 aa13.65□□□□□ -0.22
SHMT2-206ENST00000553529 C21orf62Q9NYP8 219 aa13.65□□□□□ -0.22
SHMT2-206ENST00000553529 DYNC2H1Q8NCM8 4307 aaKnown RBP13.65□□□□□ -0.22
SHMT2-206ENST00000553529 OR11H12B2RN74 326 aa13.64□□□□□ -0.23
SHMT2-206ENST00000553529 RND3P61587 244 aa13.64□□□□□ -0.23
SHMT2-206ENST00000553529 FAM106AQ4KMX7 169 aa13.64□□□□□ -0.23
SHMT2-206ENST00000553529 Q56UQ5 140 aa13.64□□□□□ -0.23
SHMT2-206ENST00000553529 ZNF57Q68EA5 555 aaPredicted RBP13.64□□□□□ -0.23
SHMT2-206ENST00000553529 STEAP1BQ6NZ63 245 aa13.64□□□□□ -0.23
SHMT2-206ENST00000553529 LPCAT3Q6P1A2 487 aa13.64□□□□□ -0.23
SHMT2-206ENST00000553529 Q6ZRM9 215 aa13.64□□□□□ -0.23
SHMT2-206ENST00000553529 OR2K2Q8NGT1 345 aa13.64□□□□□ -0.23
SHMT2-206ENST00000553529 OR4A16Q8NH70 328 aa13.64□□□□□ -0.23
SHMT2-206ENST00000553529 VN1R17PQ8TDU5 208 aa13.64□□□□□ -0.23
SHMT2-206ENST00000553529 TMEM190Q8WZ59 177 aa13.64□□□□□ -0.23
SHMT2-206ENST00000553529 UBQLN2Q9UHD9 624 aa13.64□□□□□ -0.23
SHMT2-206ENST00000553529 CEPT1Q9Y6K0 416 aa13.64□□□□□ -0.23
SHMT2-206ENST00000553529 C3orf85A0A1B0GTC6 90 aa13.63□□□□□ -0.23
SHMT2-206ENST00000553529 H3BMQ9 156 aa13.63□□□□□ -0.23
SHMT2-206ENST00000553529 I3L2K1 104 aa13.63□□□□□ -0.23
SHMT2-206ENST00000553529 TPPPO94811 219 aa13.63□□□□□ -0.23
SHMT2-206ENST00000553529 FGF2P09038 288 aa13.63□□□□□ -0.23
SHMT2-206ENST00000553529 C8orf88P0DMB2 117 aa13.63□□□□□ -0.23
SHMT2-206ENST00000553529 PRCDQ00LT1 54 aa13.63□□□□□ -0.23
SHMT2-206ENST00000553529 OR4C16Q8NGL9 310 aa13.63□□□□□ -0.23
SHMT2-206ENST00000553529 OR5B3Q8NH48 314 aa13.63□□□□□ -0.23
SHMT2-206ENST00000553529 PINX1Q96BK5 328 aaKnown RBP13.63□□□□□ -0.23
SHMT2-206ENST00000553529 RTBDNQ9BSG5 229 aaPredicted RBP13.63□□□□□ -0.23
SHMT2-206ENST00000553529 C20orf24Q9BUV8 137 aa13.63□□□□□ -0.23
SHMT2-206ENST00000553529 SLIRPQ9GZT3 109 aaKnown RBP13.63□□□□□ -0.23
SHMT2-206ENST00000553529 C6orf62Q9GZU0 229 aaPredicted RBP13.63□□□□□ -0.23
SHMT2-206ENST00000553529 HIPK2Q9H2X6 1198 aa13.63□□□□□ -0.23
SHMT2-206ENST00000553529 MRPL36Q9P0J6 103 aaKnown RBP13.63□□□□□ -0.23
SHMT2-206ENST00000553529 IGHV3OR16-13A0A075B7E8 117 aa13.62□□□□□ -0.23
SHMT2-206ENST00000553529 IGHV3-74A0A0B4J1X5 117 aa13.62□□□□□ -0.23
SHMT2-206ENST00000553529 GABARAPH6UMI1 98 aa13.62□□□□□ -0.23
SHMT2-206ENST00000553529 ST8SIA3O43173 380 aa13.62□□□□□ -0.23
SHMT2-206ENST00000553529 NXPH3O95157 252 aa13.62□□□□□ -0.23
SHMT2-206ENST00000553529 MT-CO2P00403 227 aa13.62□□□□□ -0.23
SHMT2-206ENST00000553529 CTSGP08311 255 aa13.62□□□□□ -0.23
SHMT2-206ENST00000553529 OR5AC1P0C628 307 aa13.62□□□□□ -0.23
SHMT2-206ENST00000553529 TAS2R19P59542 299 aa13.62□□□□□ -0.23
SHMT2-206ENST00000553529 IL18Q14116 193 aa13.62□□□□□ -0.23
SHMT2-206ENST00000553529 THOC7Q6I9Y2 204 aaKnown RBP13.62□□□□□ -0.23
SHMT2-206ENST00000553529 ARRDC1Q8N5I2 433 aa13.62□□□□□ -0.23
SHMT2-206ENST00000553529 TERB2Q8NHR7 220 aa13.62□□□□□ -0.23
SHMT2-206ENST00000553529 SMIM4Q8WVI0 70 aa13.62□□□□□ -0.23
SHMT2-206ENST00000553529 DIRAS2Q96HU8 199 aa13.62□□□□□ -0.23
SHMT2-206ENST00000553529 SLC2A8Q9NY64 477 aa13.62□□□□□ -0.23
SHMT2-206ENST00000553529 TECRQ9NZ01 308 aaKnown RBP13.62□□□□□ -0.23
SHMT2-206ENST00000553529 ETV6P41212 452 aa13.61□□□□□ -0.23
SHMT2-206ENST00000553529 MLANAQ16655 118 aa13.61□□□□□ -0.23
SHMT2-206ENST00000553529 TRIM16LQ309B1 348 aa13.61□□□□□ -0.23
SHMT2-206ENST00000553529 RAB2BQ8WUD1 216 aa13.61□□□□□ -0.23
SHMT2-206ENST00000553529 ISOC1Q96CN7 298 aa13.61□□□□□ -0.23
SHMT2-206ENST00000553529 TMEM56Q96MV1 263 aa13.61□□□□□ -0.23
SHMT2-206ENST00000553529 SPATA25Q9BR10 227 aa13.61□□□□□ -0.23
SHMT2-206ENST00000553529 C5orf66Q9H5L9 145 aa13.61□□□□□ -0.23
SHMT2-206ENST00000553529 THYN1Q9P016 225 aa13.61□□□□□ -0.23
SHMT2-206ENST00000553529 CCDC59Q9P031 241 aaKnown RBP13.61□□□□□ -0.23
SHMT2-206ENST00000553529 RYR2Q92736 4967 aa13.61□□□□□ -0.23
SHMT2-206ENST00000553529 SACSQ9NZJ4 4579 aa13.61□□□□□ -0.23
SHMT2-206ENST00000553529 S100GP29377 79 aa13.6□□□□□ -0.23
SHMT2-206ENST00000553529 AKR1C2P52895 323 aa13.6□□□□□ -0.23
SHMT2-206ENST00000553529 HSPE1P61604 102 aaKnown RBP13.6□□□□□ -0.23
SHMT2-206ENST00000553529 MEF2DQ14814 521 aa13.6□□□□□ -0.23
SHMT2-206ENST00000553529 ZNF124Q15973 351 aa13.6□□□□□ -0.23
SHMT2-206ENST00000553529 HSD17B13Q7Z5P4 300 aaPredicted RBP13.6□□□□□ -0.23
SHMT2-206ENST00000553529 CADM3Q8N126 398 aa13.6□□□□□ -0.23
SHMT2-206ENST00000553529 OR52B4Q8NGK2 314 aa13.6□□□□□ -0.23
SHMT2-206ENST00000553529 OR1P1Q8NH06 330 aa13.6□□□□□ -0.23
SHMT2-206ENST00000553529 BSCL2Q96G97 398 aaPredicted RBP13.6□□□□□ -0.23
SHMT2-206ENST00000553529 TSC22D3Q99576 134 aa13.6□□□□□ -0.23
SHMT2-206ENST00000553529 FAM212BQ9NTI7 297 aaPredicted RBP13.6□□□□□ -0.23
SHMT2-206ENST00000553529 COPZ2Q9P299 210 aa13.6□□□□□ -0.23
SHMT2-206ENST00000553529 CTSDP07339 412 aaPredicted RBP13.59□□□□□ -0.23
SHMT2-206ENST00000553529 TMBIM6P55061 237 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms