RNA–Protein interactions for RNA: ENST00000553474.5

SHMT2-205, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-205ENST00000553474 PPIAL4EA0A075B759 164 aa10.55□□□□□ -0.72
SHMT2-205ENST00000553474 DPRXA6NFQ7 191 aa10.55□□□□□ -0.72
SHMT2-205ENST00000553474 IFITM10A6NMD0 228 aa10.55□□□□□ -0.72
SHMT2-205ENST00000553474 PPIAL4DF5H284 164 aa10.55□□□□□ -0.72
SHMT2-205ENST00000553474 PPIAL4FP0DN26 164 aa10.55□□□□□ -0.72
SHMT2-205ENST00000553474 AREGP15514 252 aa10.55□□□□□ -0.72
SHMT2-205ENST00000553474 GNG10P50151 68 aa10.55□□□□□ -0.72
SHMT2-205ENST00000553474 GNB1P62873 340 aa10.55□□□□□ -0.72
SHMT2-205ENST00000553474 FOXL1Q12952 345 aa10.55□□□□□ -0.72
SHMT2-205ENST00000553474 GCSAMLQ5JQS6 135 aa10.55□□□□□ -0.72
SHMT2-205ENST00000553474 DUX4L9Q6RFH8 374 aaPredicted RBP10.55□□□□□ -0.72
SHMT2-205ENST00000553474 LINC00311Q8N616 119 aa10.55□□□□□ -0.72
SHMT2-205ENST00000553474 STPG3Q8N7X2 389 aa10.55□□□□□ -0.72
SHMT2-205ENST00000553474 OR5AN1Q8NGI8 311 aa10.55□□□□□ -0.72
SHMT2-205ENST00000553474 CACNG8Q8WXS5 425 aa10.55□□□□□ -0.72
SHMT2-205ENST00000553474 SAP30LQ9HAJ7 183 aa10.55□□□□□ -0.72
SHMT2-205ENST00000553474 PATZ1Q9HBE1 687 aaKnown RBP10.55□□□□□ -0.72
SHMT2-205ENST00000553474 PPIAL4AQ9Y536 164 aa10.55□□□□□ -0.72
SHMT2-205ENST00000553474 DMRT1Q9Y5R6 373 aa10.55□□□□□ -0.72
SHMT2-205ENST00000553474 ICE1Q9Y2F5 2266 aa10.55□□□□□ -0.72
SHMT2-205ENST00000553474 TRAV9-1A0A075B6T8 112 aa10.54□□□□□ -0.72
SHMT2-205ENST00000553474 A6NJY4 79 aa10.54□□□□□ -0.72
SHMT2-205ENST00000553474 TMEM178BH3BS89 294 aa10.54□□□□□ -0.72
SHMT2-205ENST00000553474 NDUFB7P17568 137 aa10.54□□□□□ -0.72
SHMT2-205ENST00000553474 NPPCP23582 126 aa10.54□□□□□ -0.72
SHMT2-205ENST00000553474 CCL8P80075 99 aa10.54□□□□□ -0.72
SHMT2-205ENST00000553474 RBPJQ06330 500 aa10.54□□□□□ -0.72
SHMT2-205ENST00000553474 BSPH1Q075Z2 132 aa10.54□□□□□ -0.72
SHMT2-205ENST00000553474 TMEM177Q53S58 311 aa10.54□□□□□ -0.72
SHMT2-205ENST00000553474 TMEM183AQ8IXX5 376 aa10.54□□□□□ -0.72
SHMT2-205ENST00000553474 OR4X1Q8NH49 305 aa10.54□□□□□ -0.72
SHMT2-205ENST00000553474 C11orf52Q96A22 123 aa10.54□□□□□ -0.72
SHMT2-205ENST00000553474 TMEM186Q96B77 213 aa10.54□□□□□ -0.72
SHMT2-205ENST00000553474 C1orf159Q96HA4 380 aa10.54□□□□□ -0.72
SHMT2-205ENST00000553474 UHRF2Q96PU4 802 aa10.54□□□□□ -0.72
SHMT2-205ENST00000553474 TMEM167BQ9NRX6 74 aa10.54□□□□□ -0.72
SHMT2-205ENST00000553474 KAAG1Q9UBP8 84 aa10.54□□□□□ -0.72
SHMT2-205ENST00000553474 MIOXQ9UGB7 285 aa10.54□□□□□ -0.72
SHMT2-205ENST00000553474 NDUFB4O95168 129 aa10.54□□□□□ -0.72
SHMT2-205ENST00000553474 USF1P22415 310 aaPredicted RBP10.54□□□□□ -0.72
SHMT2-205ENST00000553474 GCHFRP30047 84 aa10.54□□□□□ -0.72
SHMT2-205ENST00000553474 ATP5G3P48201 142 aa10.54□□□□□ -0.72
SHMT2-205ENST00000553474 LRRC10Q5BKY1 277 aa10.54□□□□□ -0.72
SHMT2-205ENST00000553474 PDPNQ86YL7 162 aa10.54□□□□□ -0.72
SHMT2-205ENST00000553474 WFDC8Q8IUA0 241 aa10.54□□□□□ -0.72
SHMT2-205ENST00000553474 ZNF843Q8N446 348 aa10.54□□□□□ -0.72
SHMT2-205ENST00000553474 OR4C13Q8NGP0 309 aa10.54□□□□□ -0.72
SHMT2-205ENST00000553474 SLC45A2Q9UMX9 530 aa10.54□□□□□ -0.72
SHMT2-205ENST00000553474 A0A1W2PN81 502 aa10.53□□□□□ -0.72
SHMT2-205ENST00000553474 C9JCJ5 164 aa10.53□□□□□ -0.72
SHMT2-205ENST00000553474 SOD3P08294 240 aa10.53□□□□□ -0.72
SHMT2-205ENST00000553474 DEFA4P12838 97 aa10.53□□□□□ -0.72
SHMT2-205ENST00000553474 CHRNA7P36544 502 aa10.53□□□□□ -0.72
SHMT2-205ENST00000553474 GPX4P36969 197 aaPredicted RBP10.53□□□□□ -0.72
SHMT2-205ENST00000553474 ZNF137PP52743 207 aa10.53□□□□□ -0.72
SHMT2-205ENST00000553474 UTF1Q5T230 341 aa10.53□□□□□ -0.72
SHMT2-205ENST00000553474 PQLC2Q6ZP29 291 aa10.53□□□□□ -0.72
SHMT2-205ENST00000553474 ST6GALNAC3Q8NDV1 305 aa10.53□□□□□ -0.72
SHMT2-205ENST00000553474 RNF2Q99496 336 aa10.53□□□□□ -0.72
SHMT2-205ENST00000553474 PCGF1Q9BSM1 259 aa10.53□□□□□ -0.72
SHMT2-205ENST00000553474 ZNF462Q96JM2 2506 aa10.53□□□□□ -0.72
SHMT2-205ENST00000553474 A0A087X0M5 115 aa10.52□□□□□ -0.72
SHMT2-205ENST00000553474 TEX50A0A1B0GTY4 177 aa10.52□□□□□ -0.72
SHMT2-205ENST00000553474 MDFIC2A0A1B0GVS7 189 aa10.52□□□□□ -0.72
SHMT2-205ENST00000553474 A0A1B0GX30 115 aa10.52□□□□□ -0.72
SHMT2-205ENST00000553474 TNFRSF13BO14836 293 aaPredicted RBP10.52□□□□□ -0.72
SHMT2-205ENST00000553474 NDUFB3O43676 98 aa10.52□□□□□ -0.72
SHMT2-205ENST00000553474 MMP23AO75900 390 aa10.52□□□□□ -0.72
SHMT2-205ENST00000553474 IGHV2-70P01814 119 aa10.52□□□□□ -0.72
SHMT2-205ENST00000553474 IGKV1-16P04430 117 aa10.52□□□□□ -0.72
SHMT2-205ENST00000553474 THBDP07204 575 aa10.52□□□□□ -0.72
SHMT2-205ENST00000553474 SAA1P0DJI8 122 aaPredicted RBP10.52□□□□□ -0.72
SHMT2-205ENST00000553474 PDLIM4P50479 330 aa10.52□□□□□ -0.72
SHMT2-205ENST00000553474 TAS2R45P59539 299 aa10.52□□□□□ -0.72
SHMT2-205ENST00000553474 UBE2G2P60604 165 aa10.52□□□□□ -0.72
SHMT2-205ENST00000553474 ERHP84090 104 aaKnown RBP10.52□□□□□ -0.72
SHMT2-205ENST00000553474 PYY3Q5JQD4 70 aa10.52□□□□□ -0.72
SHMT2-205ENST00000553474 ACTL10Q5JWF8 245 aa10.52□□□□□ -0.72
SHMT2-205ENST00000553474 RNASEH2CQ8TDP1 164 aaKnown RBP10.52□□□□□ -0.72
SHMT2-205ENST00000553474 SSMEM1Q8WWF3 244 aa10.52□□□□□ -0.72
SHMT2-205ENST00000553474 SFRP2Q96HF1 295 aa10.52□□□□□ -0.72
SHMT2-205ENST00000553474 COMMD5Q9GZQ3 224 aa10.52□□□□□ -0.72
SHMT2-205ENST00000553474 TMEM106BQ9NUM4 274 aa10.52□□□□□ -0.72
SHMT2-205ENST00000553474 FUT9Q9Y231 359 aa10.52□□□□□ -0.72
SHMT2-205ENST00000553474 A0A1W2PPQ1 181 aa10.52□□□□□ -0.73
SHMT2-205ENST00000553474 H0YJW9 148 aa10.52□□□□□ -0.73
SHMT2-205ENST00000553474 RPL8P62917 257 aaKnown RBP10.52□□□□□ -0.73
SHMT2-205ENST00000553474 FAM209BQ5JX69 171 aa10.52□□□□□ -0.73
SHMT2-205ENST00000553474 TMEM167AQ8TBQ9 72 aa10.52□□□□□ -0.73
SHMT2-205ENST00000553474 RNASE6Q93091 150 aaKnown RBP10.52□□□□□ -0.73
SHMT2-205ENST00000553474 FLYWCH2Q96CP2 140 aaKnown RBP10.52□□□□□ -0.73
SHMT2-205ENST00000553474 HARBI1Q96MB7 349 aa10.52□□□□□ -0.73
SHMT2-205ENST00000553474 MRPL32Q9BYC8 188 aaKnown RBP10.52□□□□□ -0.73
SHMT2-205ENST00000553474 GPR61Q9BZJ8 451 aa10.52□□□□□ -0.73
SHMT2-205ENST00000553474 SEPSECSQ9HD40 501 aaKnown RBP10.52□□□□□ -0.73
SHMT2-205ENST00000553474 NDUFA4L2Q9NRX3 87 aa10.52□□□□□ -0.73
SHMT2-205ENST00000553474 SRRM4A7MD48 611 aaKnown RBP10.51□□□□□ -0.73
SHMT2-205ENST00000553474 FSTL3O95633 263 aa10.51□□□□□ -0.73
SHMT2-205ENST00000553474 LINC00869P0C866 280 aa10.51□□□□□ -0.73
SHMT2-205ENST00000553474 IGFBP2P18065 325 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms