RNA–Protein interactions for RNA: ENST00000553280.1

SCFD1-209, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 574 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-209ENST00000553280 ZNF682O95780 498 aa2.25□□□□□ -2.05
SCFD1-209ENST00000553280 IFNA10P01566 189 aa2.25□□□□□ -2.05
SCFD1-209ENST00000553280 PPBPP02775 128 aa2.25□□□□□ -2.05
SCFD1-209ENST00000553280 RBP1P09455 135 aa2.25□□□□□ -2.05
SCFD1-209ENST00000553280 SMIM10L2AP0DMW4 78 aa2.25□□□□□ -2.05
SCFD1-209ENST00000553280 SMIM10L2BP0DMW5 78 aa2.25□□□□□ -2.05
SCFD1-209ENST00000553280 TAF1AQ15573 450 aaPredicted RBP2.25□□□□□ -2.05
SCFD1-209ENST00000553280 Q6ZTI0 123 aa2.25□□□□□ -2.05
SCFD1-209ENST00000553280 Q8NDZ9 215 aa2.25□□□□□ -2.05
SCFD1-209ENST00000553280 MCFD2Q8NI22 146 aa2.25□□□□□ -2.05
SCFD1-209ENST00000553280 TXNDC17Q9BRA2 123 aa2.25□□□□□ -2.05
SCFD1-209ENST00000553280 TTTY12Q9BZ98 90 aa2.25□□□□□ -2.05
SCFD1-209ENST00000553280 DOCK6Q96HP0 2047 aa2.25□□□□□ -2.05
SCFD1-209ENST00000553280 IGLV3-9A0A075B6K5 115 aa2.24□□□□□ -2.05
SCFD1-209ENST00000553280 IGHV1-18A0A0C4DH31 117 aa2.24□□□□□ -2.05
SCFD1-209ENST00000553280 H3BRN7 92 aa2.24□□□□□ -2.05
SCFD1-209ENST00000553280 SERPINE1P05121 402 aa2.24□□□□□ -2.05
SCFD1-209ENST00000553280 DEFA4P12838 97 aa2.24□□□□□ -2.05
SCFD1-209ENST00000553280 PEBP1P30086 187 aaKnown RBP2.24□□□□□ -2.05
SCFD1-209ENST00000553280 G6PCP35575 357 aa2.24□□□□□ -2.05
SCFD1-209ENST00000553280 TMEM258P61165 79 aa2.24□□□□□ -2.05
SCFD1-209ENST00000553280 TPRXLQ17RH7 258 aa2.24□□□□□ -2.05
SCFD1-209ENST00000553280 ZNF791Q3KP31 576 aaPredicted RBP2.24□□□□□ -2.05
SCFD1-209ENST00000553280 SPANXN3Q5MJ09 141 aa2.24□□□□□ -2.05
SCFD1-209ENST00000553280 KRT222Q8N1A0 295 aa2.24□□□□□ -2.05
SCFD1-209ENST00000553280 C12orf45Q8N5I9 185 aaPredicted RBP2.24□□□□□ -2.05
SCFD1-209ENST00000553280 PHOSPHO2Q8TCD6 241 aa2.24□□□□□ -2.05
SCFD1-209ENST00000553280 H1FXQ92522 213 aaKnown RBP2.24□□□□□ -2.05
SCFD1-209ENST00000553280 SLC7A6Q92536 515 aa2.24□□□□□ -2.05
SCFD1-209ENST00000553280 CCDC90BQ9GZT6 254 aa2.24□□□□□ -2.05
SCFD1-209ENST00000553280 VCX3BQ9H321 246 aa2.24□□□□□ -2.05
SCFD1-209ENST00000553280 TMEM106BQ9NUM4 274 aa2.24□□□□□ -2.05
SCFD1-209ENST00000553280 UQCC1Q9NVA1 299 aa2.24□□□□□ -2.05
SCFD1-209ENST00000553280 FAM32AQ9Y421 112 aaKnown RBP2.24□□□□□ -2.05
SCFD1-209ENST00000553280 J3QQQ9 107 aa2.23□□□□□ -2.05
SCFD1-209ENST00000553280 SLC22A1O15245 554 aa2.23□□□□□ -2.05
SCFD1-209ENST00000553280 P0DMU3 169 aa2.23□□□□□ -2.05
SCFD1-209ENST00000553280 FAM231AP0DMU4 169 aa2.23□□□□□ -2.05
SCFD1-209ENST00000553280 FAM231CP0DMU5 169 aa2.23□□□□□ -2.05
SCFD1-209ENST00000553280 NFYAP23511 347 aaPredicted RBP2.23□□□□□ -2.05
SCFD1-209ENST00000553280 MAGEA12P43365 314 aa2.23□□□□□ -2.05
SCFD1-209ENST00000553280 RPL26P61254 145 aaKnown RBP2.23□□□□□ -2.05
SCFD1-209ENST00000553280 GLO1Q04760 184 aa2.23□□□□□ -2.05
SCFD1-209ENST00000553280 DHRS4L2Q6PKH6 230 aa2.23□□□□□ -2.05
SCFD1-209ENST00000553280 KTN1-AS1Q86SY8 53 aa2.23□□□□□ -2.05
SCFD1-209ENST00000553280 RASSF5Q8WWW0 418 aa2.23□□□□□ -2.05
SCFD1-209ENST00000553280 CEP19Q96LK0 163 aa2.23□□□□□ -2.05
SCFD1-209ENST00000553280 PHB2Q99623 299 aa2.23□□□□□ -2.05
SCFD1-209ENST00000553280 ARMC1Q9NVT9 282 aa2.23□□□□□ -2.05
SCFD1-209ENST00000553280 STOML2Q9UJZ1 356 aa2.23□□□□□ -2.05
SCFD1-209ENST00000553280 RPL26L1Q9UNX3 145 aaKnown RBP2.23□□□□□ -2.05
SCFD1-209ENST00000553280 HECW1Q76N89 1606 aa2.23□□□□□ -2.05
SCFD1-209ENST00000553280 RTEL1-TNFRSF6BF6WH68 1400 aa2.23□□□□□ -2.05
SCFD1-209ENST00000553280 EIF3AQ14152 1382 aaKnown RBP2.23□□□□□ -2.05
SCFD1-209ENST00000553280 HIVEP2P31629 2446 aa2.22□□□□□ -2.05
SCFD1-209ENST00000553280 TTC21AQ8NDW8 1320 aa2.22□□□□□ -2.05
SCFD1-209ENST00000553280 SCAF11Q99590 1463 aaKnown RBP2.22□□□□□ -2.05
SCFD1-209ENST00000553280 hCG_1818297A0A087WSY0 165 aa2.22□□□□□ -2.05
SCFD1-209ENST00000553280 A8MT66 165 aa2.22□□□□□ -2.05
SCFD1-209ENST00000553280 TRAPPC2LH3BP13 241 aa2.22□□□□□ -2.05
SCFD1-209ENST00000553280 S1PR2O95136 353 aa2.22□□□□□ -2.05
SCFD1-209ENST00000553280 C8GP07360 202 aa2.22□□□□□ -2.05
SCFD1-209ENST00000553280 RPS4Y1P22090 263 aaKnown RBP2.22□□□□□ -2.05
SCFD1-209ENST00000553280 PPP1R2P41236 205 aa2.22□□□□□ -2.05
SCFD1-209ENST00000553280 ZNF80P51504 273 aaPredicted RBP2.22□□□□□ -2.05
SCFD1-209ENST00000553280 MOGQ16653 247 aa2.22□□□□□ -2.05
SCFD1-209ENST00000553280 FAM27BQ5VT28 67 aa2.22□□□□□ -2.05
SCFD1-209ENST00000553280 HACD4Q5VWC8 232 aa2.22□□□□□ -2.05
SCFD1-209ENST00000553280 PPP1R2P3Q6NXS1 205 aa2.22□□□□□ -2.05
SCFD1-209ENST00000553280 DCANP1Q8TF63 244 aa2.22□□□□□ -2.05
SCFD1-209ENST00000553280 DOHHQ9BU89 302 aa2.22□□□□□ -2.05
SCFD1-209ENST00000553280 C9orf16Q9BUW7 83 aa2.22□□□□□ -2.05
SCFD1-209ENST00000553280 TIMM21Q9BVV7 248 aa2.22□□□□□ -2.05
SCFD1-209ENST00000553280 ENY2Q9NPA8 101 aa2.22□□□□□ -2.05
SCFD1-209ENST00000553280 A0A0D9SEW6 157 aa2.21□□□□□ -2.06
SCFD1-209ENST00000553280 TRBV10-2A0A0K0K1G8 114 aa2.21□□□□□ -2.06
SCFD1-209ENST00000553280 A0A1B0GVG6 124 aa2.21□□□□□ -2.06
SCFD1-209ENST00000553280 PPIBP23284 216 aaKnown RBP2.21□□□□□ -2.06
SCFD1-209ENST00000553280 RELAQ04206 551 aa2.21□□□□□ -2.06
SCFD1-209ENST00000553280 RALGAPA2Q2PPJ7 1873 aa2.21□□□□□ -2.06
SCFD1-209ENST00000553280 GNPDA2Q8TDQ7 276 aa2.21□□□□□ -2.06
SCFD1-209ENST00000553280 OPTCQ9UBM4 332 aa2.21□□□□□ -2.06
SCFD1-209ENST00000553280 SCN9AQ15858 1988 aa2.21□□□□□ -2.06
SCFD1-209ENST00000553280 ARHGAP32A7KAX9 2087 aa2.21□□□□□ -2.06
SCFD1-209ENST00000553280 DENND4BO75064 1496 aaPredicted RBP2.2□□□□□ -2.06
SCFD1-209ENST00000553280 COL5A1P20908 1838 aaPredicted RBP2.2□□□□□ -2.06
SCFD1-209ENST00000553280 SIGLEC16A6NMB1 481 aa2.2□□□□□ -2.06
SCFD1-209ENST00000553280 HMSDA8MTL9 139 aa2.2□□□□□ -2.06
SCFD1-209ENST00000553280 ZNF705FA8MVS1 300 aaPredicted RBP2.2□□□□□ -2.06
SCFD1-209ENST00000553280 BUB1B-PAK6H3BSN5 160 aa2.2□□□□□ -2.06
SCFD1-209ENST00000553280 PGLYRP1O75594 196 aaPredicted RBP2.2□□□□□ -2.06
SCFD1-209ENST00000553280 OR2J2O76002 312 aa2.2□□□□□ -2.06
SCFD1-209ENST00000553280 FXYD2P54710 66 aa2.2□□□□□ -2.06
SCFD1-209ENST00000553280 SUPT4H1P63272 117 aaKnown RBP2.2□□□□□ -2.06
SCFD1-209ENST00000553280 KISS1Q15726 138 aa2.2□□□□□ -2.06
SCFD1-209ENST00000553280 SLC36A1Q7Z2H8 476 aa2.2□□□□□ -2.06
SCFD1-209ENST00000553280 TMEM86AQ8N2M4 240 aa2.2□□□□□ -2.06
SCFD1-209ENST00000553280 TERB2Q8NHR7 220 aa2.2□□□□□ -2.06
SCFD1-209ENST00000553280 RNASE11Q8TAA1 199 aaKnown RBP2.2□□□□□ -2.06
SCFD1-209ENST00000553280 PARVBQ9HBI1 364 aa2.2□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms