RNA–Protein interactions for RNA: ENST00000551623.1

PTCH1-223, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 366 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-223ENST00000551623 PANO1I0J062 215 aa1.48□□□□□ -2.17
PTCH1-223ENST00000551623 VCYO14598 125 aa1.48□□□□□ -2.17
PTCH1-223ENST00000551623 SIVA1O15304 175 aa1.48□□□□□ -2.17
PTCH1-223ENST00000551623 HMGN1P05114 100 aa1.48□□□□□ -2.17
PTCH1-223ENST00000551623 ATP5G1P05496 136 aa1.48□□□□□ -2.17
PTCH1-223ENST00000551623 KRT8P05787 483 aa1.48□□□□□ -2.17
PTCH1-223ENST00000551623 CTSGP08311 255 aa1.48□□□□□ -2.17
PTCH1-223ENST00000551623 OR2T7P0C7T2 308 aa1.48□□□□□ -2.17
PTCH1-223ENST00000551623 GTF2F2P13984 249 aa1.48□□□□□ -2.17
PTCH1-223ENST00000551623 AREGP15514 252 aa1.48□□□□□ -2.17
PTCH1-223ENST00000551623 MGMTP16455 207 aa1.48□□□□□ -2.17
PTCH1-223ENST00000551623 ATP6V1B2P21281 511 aa1.48□□□□□ -2.17
PTCH1-223ENST00000551623 CRHBPP24387 322 aa1.48□□□□□ -2.17
PTCH1-223ENST00000551623 GPR183P32249 361 aa1.48□□□□□ -2.17
PTCH1-223ENST00000551623 ATP5G3P48201 142 aa1.48□□□□□ -2.17
PTCH1-223ENST00000551623 DAD1P61803 113 aa1.48□□□□□ -2.17
PTCH1-223ENST00000551623 PAFAH1B2P68402 229 aa1.48□□□□□ -2.17
PTCH1-223ENST00000551623 TPBGQ13641 420 aa1.48□□□□□ -2.17
PTCH1-223ENST00000551623 GPR176Q14439 515 aa1.48□□□□□ -2.17
PTCH1-223ENST00000551623 RSU1Q15404 277 aa1.48□□□□□ -2.17
PTCH1-223ENST00000551623 TNXAQ16473 311 aa1.48□□□□□ -2.17
PTCH1-223ENST00000551623 ZSCAN26Q16670 478 aa1.48□□□□□ -2.17
PTCH1-223ENST00000551623 ESRGQ1W209 222 aa1.48□□□□□ -2.17
PTCH1-223ENST00000551623 VMA21Q3ZAQ7 101 aa1.48□□□□□ -2.17
PTCH1-223ENST00000551623 ZFP69Q49AA0 526 aa1.48□□□□□ -2.17
PTCH1-223ENST00000551623 RBM48Q5RL73 367 aaKnown RBP1.48□□□□□ -2.17
PTCH1-223ENST00000551623 C10orf55Q5SWW7 151 aa1.48□□□□□ -2.17
PTCH1-223ENST00000551623 AADACL4Q5VUY2 407 aa1.48□□□□□ -2.17
PTCH1-223ENST00000551623 UBE2UQ5VVX9 321 aa1.48□□□□□ -2.17
PTCH1-223ENST00000551623 LEMD1Q68G75 181 aa1.48□□□□□ -2.17
PTCH1-223ENST00000551623 SIGIRRQ6IA17 410 aa1.48□□□□□ -2.17
PTCH1-223ENST00000551623 OR10K2Q6IF99 312 aa1.48□□□□□ -2.17
PTCH1-223ENST00000551623 RAB12Q6IQ22 244 aa1.48□□□□□ -2.17
PTCH1-223ENST00000551623 CGB2Q6NT52 195 aa1.48□□□□□ -2.17
PTCH1-223ENST00000551623 PLET1Q6UQ28 207 aa1.48□□□□□ -2.17
PTCH1-223ENST00000551623 PQLC2Q6ZP29 291 aa1.48□□□□□ -2.17
PTCH1-223ENST00000551623 PLEKHG7Q6ZR37 379 aa1.48□□□□□ -2.17
PTCH1-223ENST00000551623 MOB1BQ7L9L4 216 aa1.48□□□□□ -2.17
PTCH1-223ENST00000551623 SSX6Q7RTT6 188 aa1.48□□□□□ -2.17
PTCH1-223ENST00000551623 SLC35F2Q8IXU6 374 aa1.48□□□□□ -2.17
PTCH1-223ENST00000551623 LINC00612Q8N6U2 182 aa1.48□□□□□ -2.17
PTCH1-223ENST00000551623 Q8N814 137 aa1.48□□□□□ -2.17
PTCH1-223ENST00000551623 ZNF709Q8N972 641 aa1.48□□□□□ -2.17
PTCH1-223ENST00000551623 AQP11Q8NBQ7 271 aa1.48□□□□□ -2.17
PTCH1-223ENST00000551623 TMEM116Q8NCL8 245 aa1.48□□□□□ -2.17
PTCH1-223ENST00000551623 DUSP18Q8NEJ0 188 aa1.48□□□□□ -2.17
PTCH1-223ENST00000551623 OR51A4Q8NGJ6 313 aa1.48□□□□□ -2.17
PTCH1-223ENST00000551623 OR51A2Q8NGJ7 313 aa1.48□□□□□ -2.17
PTCH1-223ENST00000551623 OR4K15Q8NH41 348 aa1.48□□□□□ -2.17
PTCH1-223ENST00000551623 TMEM167AQ8TBQ9 72 aa1.48□□□□□ -2.17
PTCH1-223ENST00000551623 CIRBP-AS1Q8TBR5 109 aa1.48□□□□□ -2.17
PTCH1-223ENST00000551623 TEX47Q8TBZ9 253 aa1.48□□□□□ -2.17
PTCH1-223ENST00000551623 RXFP4Q8TDU9 374 aa1.48□□□□□ -2.17
PTCH1-223ENST00000551623 CCDC107Q8WV48 283 aa1.48□□□□□ -2.17
PTCH1-223ENST00000551623 ORAI1Q96D31 301 aa1.48□□□□□ -2.17
PTCH1-223ENST00000551623 PYURFQ96I23 114 aa1.48□□□□□ -2.17
PTCH1-223ENST00000551623 ABHD14BQ96IU4 210 aa1.48□□□□□ -2.17
PTCH1-223ENST00000551623 CMTM3Q96MX0 182 aa1.48□□□□□ -2.17
PTCH1-223ENST00000551623 NR1H4Q96RI1 486 aaPredicted RBP1.48□□□□□ -2.17
PTCH1-223ENST00000551623 PHB2Q99623 299 aa1.48□□□□□ -2.17
PTCH1-223ENST00000551623 VGLL1Q99990 258 aa1.48□□□□□ -2.17
PTCH1-223ENST00000551623 SIKE1Q9BRV8 207 aa1.48□□□□□ -2.17
PTCH1-223ENST00000551623 ZNF446Q9NWS9 450 aa1.48□□□□□ -2.17
PTCH1-223ENST00000551623 GID8Q9NWU2 228 aa1.48□□□□□ -2.17
PTCH1-223ENST00000551623 TAS2R1Q9NYW7 299 aa1.48□□□□□ -2.17
PTCH1-223ENST00000551623 KCNIP1Q9NZI2 227 aa1.48□□□□□ -2.17
PTCH1-223ENST00000551623 ING4Q9UNL4 249 aa1.48□□□□□ -2.17
PTCH1-223ENST00000551623 GTF2A1LQ9UNN4 478 aa1.48□□□□□ -2.17
PTCH1-223ENST00000551623 YTHDF2Q9Y5A9 579 aaKnown RBP1.48□□□□□ -2.17
PTCH1-223ENST00000551623 IGHV3OR16-8A0A075B7F1 116 aa1.47□□□□□ -2.17
PTCH1-223ENST00000551623 TRAV14DV4A0A0A6YYC5 116 aa1.47□□□□□ -2.17
PTCH1-223ENST00000551623 IGHV3-35A0A0C4DH35 117 aa1.47□□□□□ -2.17
PTCH1-223ENST00000551623 OR2T8A6NH00 312 aa1.47□□□□□ -2.17
PTCH1-223ENST00000551623 ZNF670-ZNF695F2Z2N8 137 aa1.47□□□□□ -2.17
PTCH1-223ENST00000551623 K7EIM0 57 aa1.47□□□□□ -2.17
PTCH1-223ENST00000551623 MAGEB4O15481 346 aaPredicted RBP1.47□□□□□ -2.17
PTCH1-223ENST00000551623 RGS16O15492 202 aaPredicted RBP1.47□□□□□ -2.17
PTCH1-223ENST00000551623 PDCD6O75340 191 aa1.47□□□□□ -2.17
PTCH1-223ENST00000551623 KBTBD11O94819 623 aa1.47□□□□□ -2.17
PTCH1-223ENST00000551623 CCNB2O95067 398 aa1.47□□□□□ -2.17
PTCH1-223ENST00000551623 FABP3P05413 133 aa1.47□□□□□ -2.17
PTCH1-223ENST00000551623 MRPL3P09001 348 aaKnown RBP1.47□□□□□ -2.17
PTCH1-223ENST00000551623 SAA1P0DJI8 122 aaPredicted RBP1.47□□□□□ -2.17
PTCH1-223ENST00000551623 APELAP0DMC3 54 aa1.47□□□□□ -2.17
PTCH1-223ENST00000551623 HLA-DRB4P13762 266 aa1.47□□□□□ -2.17
PTCH1-223ENST00000551623 HSD17B1P14061 328 aa1.47□□□□□ -2.17
PTCH1-223ENST00000551623 CELP19835 753 aa1.47□□□□□ -2.17
PTCH1-223ENST00000551623 M6PRP20645 277 aa1.47□□□□□ -2.17
PTCH1-223ENST00000551623 ZBTB25P24278 435 aa1.47□□□□□ -2.17
PTCH1-223ENST00000551623 DUTP33316 252 aaKnown RBP1.47□□□□□ -2.17
PTCH1-223ENST00000551623 IFFO1Q0D2I5 559 aa1.47□□□□□ -2.17
PTCH1-223ENST00000551623 TMED1Q13445 227 aa1.47□□□□□ -2.17
PTCH1-223ENST00000551623 ARFRP1Q13795 201 aa1.47□□□□□ -2.17
PTCH1-223ENST00000551623 MAPRE2Q15555 327 aa1.47□□□□□ -2.17
PTCH1-223ENST00000551623 ZNF79Q15937 498 aa1.47□□□□□ -2.17
PTCH1-223ENST00000551623 RTL8BQ17RB0 113 aa1.47□□□□□ -2.17
PTCH1-223ENST00000551623 TDRG1Q3Y452 100 aa1.47□□□□□ -2.17
PTCH1-223ENST00000551623 YIF1BQ5BJH7 314 aa1.47□□□□□ -2.17
PTCH1-223ENST00000551623 NXNL2Q5VZ03 156 aa1.47□□□□□ -2.17
PTCH1-223ENST00000551623 THOC7Q6I9Y2 204 aaKnown RBP1.47□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms