RNA–Protein interactions for RNA: ENST00000551391.1

SCAF11-215, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-215ENST00000551391 ZNF565Q8N9K5 539 aa0.75□□□□□ -2.29
SCAF11-215ENST00000551391 MRPL30Q8TCC3 161 aaKnown RBP0.75□□□□□ -2.29
SCAF11-215ENST00000551391 PTH2Q96A98 100 aa0.75□□□□□ -2.29
SCAF11-215ENST00000551391 ODF3Q96PU9 254 aa0.75□□□□□ -2.29
SCAF11-215ENST00000551391 WDR61Q9GZS3 305 aaKnown RBP0.75□□□□□ -2.29
SCAF11-215ENST00000551391 CISHQ9NSE2 258 aa0.75□□□□□ -2.29
SCAF11-215ENST00000551391 LSM5Q9Y4Y9 91 aaKnown RBP0.75□□□□□ -2.29
SCAF11-215ENST00000551391 MYOFQ9NZM1 2061 aa0.75□□□□□ -2.29
SCAF11-215ENST00000551391 COL4A5P29400 1685 aa0.75□□□□□ -2.29
SCAF11-215ENST00000551391 DIDO1Q9BTC0 2240 aaKnown RBP0.74□□□□□ -2.29
SCAF11-215ENST00000551391 RALGAPA2Q2PPJ7 1873 aa0.74□□□□□ -2.29
SCAF11-215ENST00000551391 CACNA1BQ00975 2339 aa0.74□□□□□ -2.29
SCAF11-215ENST00000551391 FUOMA2VDF0 154 aa0.74□□□□□ -2.29
SCAF11-215ENST00000551391 TMEM212A6NML5 194 aa0.74□□□□□ -2.29
SCAF11-215ENST00000551391 RUNX1Q01196 453 aa0.74□□□□□ -2.29
SCAF11-215ENST00000551391 PRB3Q04118 309 aaPredicted RBP0.74□□□□□ -2.29
SCAF11-215ENST00000551391 ZNF846Q147U1 533 aa0.74□□□□□ -2.29
SCAF11-215ENST00000551391 AADACL3Q5VUY0 350 aa0.74□□□□□ -2.29
SCAF11-215ENST00000551391 ZNF826PQ6ZT77 177 aa0.74□□□□□ -2.29
SCAF11-215ENST00000551391 DEFB128Q7Z7B8 93 aa0.74□□□□□ -2.29
SCAF11-215ENST00000551391 LRRC25Q8N386 305 aaPredicted RBP0.74□□□□□ -2.29
SCAF11-215ENST00000551391 SLC35B4Q969S0 331 aa0.74□□□□□ -2.29
SCAF11-215ENST00000551391 SERPINI1Q99574 410 aa0.74□□□□□ -2.29
SCAF11-215ENST00000551391 DERL1Q9BUN8 251 aa0.74□□□□□ -2.29
SCAF11-215ENST00000551391 TRABDQ9H4I3 376 aa0.74□□□□□ -2.29
SCAF11-215ENST00000551391 OR5AC2Q9NZP5 309 aa0.74□□□□□ -2.29
SCAF11-215ENST00000551391 SNURFQ9Y675 71 aa0.74□□□□□ -2.29
SCAF11-215ENST00000551391 ROS1P08922 2347 aa0.73□□□□□ -2.29
SCAF11-215ENST00000551391 TTC21AQ8NDW8 1320 aa0.73□□□□□ -2.29
SCAF11-215ENST00000551391 IGKV1-5P01602 117 aa0.73□□□□□ -2.29
SCAF11-215ENST00000551391 HIST1H2BOP23527 126 aa0.73□□□□□ -2.29
SCAF11-215ENST00000551391 HIST1H2BBP33778 126 aa0.73□□□□□ -2.29
SCAF11-215ENST00000551391 EIF2B2P49770 351 aaKnown RBP0.73□□□□□ -2.29
SCAF11-215ENST00000551391 HIST1H2BDP58876 126 aa0.73□□□□□ -2.29
SCAF11-215ENST00000551391 HIST1H2BCP62807 126 aa0.73□□□□□ -2.29
SCAF11-215ENST00000551391 KISS1Q15726 138 aa0.73□□□□□ -2.29
SCAF11-215ENST00000551391 HIST3H3Q16695 136 aa0.73□□□□□ -2.29
SCAF11-215ENST00000551391 HIST2H2BEQ16778 126 aa0.73□□□□□ -2.29
SCAF11-215ENST00000551391 SPANXN3Q5MJ09 141 aa0.73□□□□□ -2.29
SCAF11-215ENST00000551391 HIST2H2BFQ5QNW6 126 aaPredicted RBP0.73□□□□□ -2.29
SCAF11-215ENST00000551391 TEX36Q5VZQ5 186 aa0.73□□□□□ -2.29
SCAF11-215ENST00000551391 RPL22L1Q6P5R6 122 aaKnown RBP0.73□□□□□ -2.29
SCAF11-215ENST00000551391 LCN15Q6UWW0 184 aa0.73□□□□□ -2.29
SCAF11-215ENST00000551391 AAED1Q7RTV5 226 aa0.73□□□□□ -2.29
SCAF11-215ENST00000551391 OR13C4Q8NGS5 318 aa0.73□□□□□ -2.29
SCAF11-215ENST00000551391 OR4C6Q8NH72 309 aa0.73□□□□□ -2.29
SCAF11-215ENST00000551391 PFN4Q8NHR9 129 aa0.73□□□□□ -2.29
SCAF11-215ENST00000551391 MCFD2Q8NI22 146 aa0.73□□□□□ -2.29
SCAF11-215ENST00000551391 HIST1H2BHQ93079 126 aa0.73□□□□□ -2.29
SCAF11-215ENST00000551391 TMEM106AQ96A25 262 aa0.73□□□□□ -2.29
SCAF11-215ENST00000551391 HIST1H2BNQ99877 126 aa0.73□□□□□ -2.29
SCAF11-215ENST00000551391 HIST1H2BMQ99879 126 aa0.73□□□□□ -2.29
SCAF11-215ENST00000551391 CKLFQ9UBR5 152 aa0.73□□□□□ -2.29
SCAF11-215ENST00000551391 TOPBP1Q92547 1522 aa0.73□□□□□ -2.29
SCAF11-215ENST00000551391 TECTAO75443 2155 aa0.72□□□□□ -2.29
SCAF11-215ENST00000551391 EEF1E1-BLOC1S5C9J1V9 151 aa0.72□□□□□ -2.29
SCAF11-215ENST00000551391 KCNK1O00180 336 aa0.72□□□□□ -2.29
SCAF11-215ENST00000551391 GEMIN2O14893 280 aaKnown RBP0.72□□□□□ -2.29
SCAF11-215ENST00000551391 TGOLN2O43493 480 aa0.72□□□□□ -2.29
SCAF11-215ENST00000551391 CALB1P05937 261 aa0.72□□□□□ -2.29
SCAF11-215ENST00000551391 HTR1AP08908 422 aa0.72□□□□□ -2.29
SCAF11-215ENST00000551391 TCL1AP56279 114 aa0.72□□□□□ -2.29
SCAF11-215ENST00000551391 CDK10Q15131 360 aa0.72□□□□□ -2.29
SCAF11-215ENST00000551391 CDKL4Q5MAI5 379 aa0.72□□□□□ -2.29
SCAF11-215ENST00000551391 IQCF2Q8IXL9 164 aa0.72□□□□□ -2.29
SCAF11-215ENST00000551391 TMEM86BQ8N661 226 aa0.72□□□□□ -2.29
SCAF11-215ENST00000551391 OR4D11Q8NGI4 311 aa0.72□□□□□ -2.29
SCAF11-215ENST00000551391 AQP3Q92482 292 aa0.72□□□□□ -2.29
SCAF11-215ENST00000551391 SCGB3A1Q96QR1 104 aa0.72□□□□□ -2.29
SCAF11-215ENST00000551391 OR52E6Q96RD3 313 aa0.72□□□□□ -2.29
SCAF11-215ENST00000551391 C22orf24Q9Y442 160 aa0.72□□□□□ -2.29
SCAF11-215ENST00000551391 HEATR5AQ86XA9 2040 aa0.72□□□□□ -2.29
SCAF11-215ENST00000551391 SNAPC4Q5SXM2 1469 aa0.72□□□□□ -2.29
SCAF11-215ENST00000551391 POLEQ07864 2286 aa0.71□□□□□ -2.3
SCAF11-215ENST00000551391 TRAV14DV4A0A0A6YYC5 116 aa0.71□□□□□ -2.3
SCAF11-215ENST00000551391 OR5F1O95221 314 aa0.71□□□□□ -2.3
SCAF11-215ENST00000551391 UBE2IP63279 158 aaKnown RBP0.71□□□□□ -2.3
SCAF11-215ENST00000551391 OR2F1Q13607 317 aa0.71□□□□□ -2.3
SCAF11-215ENST00000551391 LPCAT4Q643R3 524 aa0.71□□□□□ -2.3
SCAF11-215ENST00000551391 WFDC11Q8NEX6 87 aa0.71□□□□□ -2.3
SCAF11-215ENST00000551391 OR2T4Q8NH00 348 aa0.71□□□□□ -2.3
SCAF11-215ENST00000551391 MRPS26Q9BYN8 205 aaKnown RBP0.71□□□□□ -2.3
SCAF11-215ENST00000551391 ARFGEF3Q5TH69 2177 aa0.71□□□□□ -2.3
SCAF11-215ENST00000551391 RIC1Q4ADV7 1423 aa0.71□□□□□ -2.3
SCAF11-215ENST00000551391 GOLGA6L19H0YKK7 550 aa0.7□□□□□ -2.3
SCAF11-215ENST00000551391 CTSDP07339 412 aaPredicted RBP0.7□□□□□ -2.3
SCAF11-215ENST00000551391 HIST1H1EP10412 219 aaKnown RBP0.7□□□□□ -2.3
SCAF11-215ENST00000551391 C20orf196Q8IYI0 205 aa0.7□□□□□ -2.3
SCAF11-215ENST00000551391 FAM19A2Q8N3H0 131 aa0.7□□□□□ -2.3
SCAF11-215ENST00000551391 LINC00471Q8N535 108 aa0.7□□□□□ -2.3
SCAF11-215ENST00000551391 OR51D1Q8NGF3 324 aa0.7□□□□□ -2.3
SCAF11-215ENST00000551391 KLK6Q92876 244 aa0.7□□□□□ -2.3
SCAF11-215ENST00000551391 MRPL57Q9BQC6 102 aaKnown RBP0.7□□□□□ -2.3
SCAF11-215ENST00000551391 PRTFDC1Q9NRG1 225 aa0.7□□□□□ -2.3
SCAF11-215ENST00000551391 GUCA1BQ9UMX6 200 aa0.7□□□□□ -2.3
SCAF11-215ENST00000551391 NUP155O75694 1391 aa0.7□□□□□ -2.3
SCAF11-215ENST00000551391 A0A087WX48 190 aa0.69□□□□□ -2.3
SCAF11-215ENST00000551391 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP0.69□□□□□ -2.3
SCAF11-215ENST00000551391 PSMD12O00232 456 aaPredicted RBP0.69□□□□□ -2.3
SCAF11-215ENST00000551391 IFNA5P01569 189 aa0.69□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms