RNA–Protein interactions for RNA: ENST00000550584.6

PPFIA2-220, Transcript of PTPRF interacting protein alpha 2, humanhuman

TSL 1 (best) BASIC

Gene PPFIA2, Length 5,405 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-220ENST00000550584 NEGR1Q7Z3B1 354 aa7.42□□□□□ -1.22
PPFIA2-220ENST00000550584 VN1R2Q8NFZ6 395 aa7.42□□□□□ -1.22
PPFIA2-220ENST00000550584 DUSP15Q9H1R2 295 aaPredicted RBP7.42□□□□□ -1.22
PPFIA2-220ENST00000550584 GLI3P10071 1580 aa7.42□□□□□ -1.22
PPFIA2-220ENST00000550584 LILRA5A6NI73 299 aa7.42□□□□□ -1.22
PPFIA2-220ENST00000550584 SCRG1O75711 98 aa7.42□□□□□ -1.22
PPFIA2-220ENST00000550584 NAPSAO96009 420 aa7.42□□□□□ -1.22
PPFIA2-220ENST00000550584 SRD5A1P18405 259 aa7.42□□□□□ -1.22
PPFIA2-220ENST00000550584 TFF3Q07654 80 aa7.42□□□□□ -1.22
PPFIA2-220ENST00000550584 CEND1Q8N111 149 aa7.42□□□□□ -1.22
PPFIA2-220ENST00000550584 C8orf46Q8TAG6 207 aa7.42□□□□□ -1.22
PPFIA2-220ENST00000550584 TCF19Q9Y242 345 aa7.42□□□□□ -1.22
PPFIA2-220ENST00000550584 SHISA9B4DS77 424 aa7.42□□□□□ -1.22
PPFIA2-220ENST00000550584 GGTLC3B5MD39 225 aa7.42□□□□□ -1.22
PPFIA2-220ENST00000550584 F2Z2F3 143 aa7.42□□□□□ -1.22
PPFIA2-220ENST00000550584 SYNGR3O43761 229 aa7.42□□□□□ -1.22
PPFIA2-220ENST00000550584 TMEM78Q5T7P6 136 aa7.42□□□□□ -1.22
PPFIA2-220ENST00000550584 PCSK4Q6UW60 755 aa7.42□□□□□ -1.22
PPFIA2-220ENST00000550584 TDHQ8IZJ6 230 aa7.42□□□□□ -1.22
PPFIA2-220ENST00000550584 WIPF2Q8TF74 440 aaPredicted RBP7.42□□□□□ -1.22
PPFIA2-220ENST00000550584 NUP98P52948 1817 aa7.42□□□□□ -1.22
PPFIA2-220ENST00000550584 H7C1H1 209 aa7.41□□□□□ -1.22
PPFIA2-220ENST00000550584 ATOX1O00244 68 aa7.41□□□□□ -1.22
PPFIA2-220ENST00000550584 IGHV3-7P01780 117 aa7.41□□□□□ -1.22
PPFIA2-220ENST00000550584 CCL1P22362 96 aa7.41□□□□□ -1.22
PPFIA2-220ENST00000550584 COL9A2Q14055 689 aaPredicted RBP7.41□□□□□ -1.22
PPFIA2-220ENST00000550584 SLC25A39Q9BZJ4 359 aaPredicted RBP7.41□□□□□ -1.22
PPFIA2-220ENST00000550584 M0R2P5 195 aa7.41□□□□□ -1.22
PPFIA2-220ENST00000550584 HMGA1P17096 107 aaKnown RBP7.41□□□□□ -1.22
PPFIA2-220ENST00000550584 RPL15P61313 204 aaKnown RBP7.41□□□□□ -1.22
PPFIA2-220ENST00000550584 PDCD1Q15116 288 aa7.41□□□□□ -1.22
PPFIA2-220ENST00000550584 ETDBQ3ZM63 59 aa7.41□□□□□ -1.22
PPFIA2-220ENST00000550584 FAM166AQ6J272 317 aa7.41□□□□□ -1.22
PPFIA2-220ENST00000550584 WFDC5Q8TCV5 224 aa7.41□□□□□ -1.22
PPFIA2-220ENST00000550584 ANAPC10Q9UM13 185 aa7.41□□□□□ -1.22
PPFIA2-220ENST00000550584 C2CD4DB7Z1M9 353 aa7.41□□□□□ -1.22
PPFIA2-220ENST00000550584 EGR1P18146 543 aa7.41□□□□□ -1.22
PPFIA2-220ENST00000550584 SUPT4H1P63272 117 aaKnown RBP7.41□□□□□ -1.22
PPFIA2-220ENST00000550584 AMN1Q8IY45 258 aa7.41□□□□□ -1.22
PPFIA2-220ENST00000550584 RNASE7Q9H1E1 156 aaKnown RBP7.41□□□□□ -1.22
PPFIA2-220ENST00000550584 SHANK3Q9BYB0 1731 aa7.41□□□□□ -1.22
PPFIA2-220ENST00000550584 J3QW42 95 aa7.41□□□□□ -1.22
PPFIA2-220ENST00000550584 CELA2BP08218 269 aaPredicted RBP7.41□□□□□ -1.22
PPFIA2-220ENST00000550584 LINC00271P0C7V0 271 aa7.41□□□□□ -1.22
PPFIA2-220ENST00000550584 CCL2P13500 99 aa7.41□□□□□ -1.22
PPFIA2-220ENST00000550584 TNFRSF1AP19438 455 aa7.41□□□□□ -1.22
PPFIA2-220ENST00000550584 TMEM170BQ5T4T1 132 aa7.41□□□□□ -1.22
PPFIA2-220ENST00000550584 LCN12Q6JVE5 192 aa7.41□□□□□ -1.22
PPFIA2-220ENST00000550584 ZNF488Q96MN9 340 aa7.41□□□□□ -1.22
PPFIA2-220ENST00000550584 K7ESM1 405 aa7.41□□□□□ -1.22
PPFIA2-220ENST00000550584 LINC00114Q6XXX2 140 aa7.41□□□□□ -1.22
PPFIA2-220ENST00000550584 ZNF721Q8TF20 911 aa7.41□□□□□ -1.22
PPFIA2-220ENST00000550584 VOPP1Q96AW1 172 aa7.41□□□□□ -1.22
PPFIA2-220ENST00000550584 COX14Q96I36 57 aa7.41□□□□□ -1.22
PPFIA2-220ENST00000550584 ZNF492Q9P255 531 aa7.41□□□□□ -1.22
PPFIA2-220ENST00000550584 V9GYY9 64 aa7.41□□□□□ -1.22
PPFIA2-220ENST00000550584 NDUFB3O43676 98 aa7.4□□□□□ -1.22
PPFIA2-220ENST00000550584 LYZL6O75951 148 aa7.4□□□□□ -1.22
PPFIA2-220ENST00000550584 MOSP00540 346 aa7.4□□□□□ -1.22
PPFIA2-220ENST00000550584 ASCL5Q7RTU5 278 aa7.4□□□□□ -1.22
PPFIA2-220ENST00000550584 PTH2Q96A98 100 aa7.4□□□□□ -1.22
PPFIA2-220ENST00000550584 TBC1D29Q9UFV1 150 aa7.4□□□□□ -1.22
PPFIA2-220ENST00000550584 TMSB15BA0A087X1C1 80 aa7.4□□□□□ -1.22
PPFIA2-220ENST00000550584 A0A1W2PPV9 198 aa7.4□□□□□ -1.22
PPFIA2-220ENST00000550584 NDUFA3O95167 84 aa7.4□□□□□ -1.22
PPFIA2-220ENST00000550584 FAM231DQ6ZW35 169 aa7.4□□□□□ -1.22
PPFIA2-220ENST00000550584 VN1R4Q7Z5H5 301 aa7.4□□□□□ -1.22
PPFIA2-220ENST00000550584 AMELYQ99218 206 aa7.4□□□□□ -1.22
PPFIA2-220ENST00000550584 C1RLQ9NZP8 487 aa7.4□□□□□ -1.22
PPFIA2-220ENST00000550584 NTN1O95631 604 aa7.4□□□□□ -1.23
PPFIA2-220ENST00000550584 MYF5P13349 255 aa7.4□□□□□ -1.23
PPFIA2-220ENST00000550584 C19orf54Q5BKX5 351 aa7.4□□□□□ -1.23
PPFIA2-220ENST00000550584 SPATA31B1PQ5VZV4 182 aa7.4□□□□□ -1.23
PPFIA2-220ENST00000550584 TMEM178AQ8NBL3 297 aa7.4□□□□□ -1.23
PPFIA2-220ENST00000550584 DOT1LQ8TEK3 1739 aa7.4□□□□□ -1.23
PPFIA2-220ENST00000550584 NPIPB11E5RHQ5 1161 aa7.4□□□□□ -1.23
PPFIA2-220ENST00000550584 TAX1BP3O14907 124 aa7.4□□□□□ -1.23
PPFIA2-220ENST00000550584 RNF182Q8N6D2 247 aa7.4□□□□□ -1.23
PPFIA2-220ENST00000550584 RNF166Q96A37 237 aaPredicted RBP7.4□□□□□ -1.23
PPFIA2-220ENST00000550584 IFI27L2Q9H2X8 130 aa7.4□□□□□ -1.23
PPFIA2-220ENST00000550584 PLA2G3Q9NZ20 509 aa7.4□□□□□ -1.23
PPFIA2-220ENST00000550584 SLC25A15Q9Y619 301 aa7.4□□□□□ -1.23
PPFIA2-220ENST00000550584 METTL12A8MUP2 240 aa7.39□□□□□ -1.23
PPFIA2-220ENST00000550584 PRKNO60260 465 aaPredicted RBP7.39□□□□□ -1.23
PPFIA2-220ENST00000550584 FAM106CPP0CH98 169 aa7.39□□□□□ -1.23
PPFIA2-220ENST00000550584 RPL11P62913 178 aaKnown RBP7.39□□□□□ -1.23
PPFIA2-220ENST00000550584 LAGE3Q14657 143 aa7.39□□□□□ -1.23
PPFIA2-220ENST00000550584 FAM106AQ4KMX7 169 aa7.39□□□□□ -1.23
PPFIA2-220ENST00000550584 DNAJC30Q96LL9 226 aa7.39□□□□□ -1.23
PPFIA2-220ENST00000550584 CT62P0C5K7 136 aa7.39□□□□□ -1.23
PPFIA2-220ENST00000550584 C3AR1Q16581 482 aa7.39□□□□□ -1.23
PPFIA2-220ENST00000550584 UNQ6494/PRO21346Q6UXR6 183 aa7.39□□□□□ -1.23
PPFIA2-220ENST00000550584 C18orf15Q96N68 181 aa7.39□□□□□ -1.23
PPFIA2-220ENST00000550584 MRPL20Q9BYC9 149 aaKnown RBP7.39□□□□□ -1.23
PPFIA2-220ENST00000550584 HIGD1BQ9P298 99 aa7.39□□□□□ -1.23
PPFIA2-220ENST00000550584 TGFAP01135 160 aa7.39□□□□□ -1.23
PPFIA2-220ENST00000550584 CDPF1Q6NVV7 123 aa7.39□□□□□ -1.23
PPFIA2-220ENST00000550584 TMEM14EPQ6UXP3 125 aa7.39□□□□□ -1.23
PPFIA2-220ENST00000550584 LINC01555Q8NAE3 123 aa7.39□□□□□ -1.23
PPFIA2-220ENST00000550584 PRDM14Q9GZV8 571 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms