RNA–Protein interactions for RNA: ENST00000550477.5

SMARCD1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 3

Gene SMARCD1, Length 911 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-209ENST00000550477 RLN1P04808 185 aa17.1■□□□□ 0.33
SMARCD1-209ENST00000550477 CTSDP07339 412 aaPredicted RBP17.1■□□□□ 0.33
SMARCD1-209ENST00000550477 LPAR6P43657 344 aa17.1■□□□□ 0.33
SMARCD1-209ENST00000550477 ODF3L2Q3SX64 289 aa17.1■□□□□ 0.33
SMARCD1-209ENST00000550477 DGCR14Q96DF8 476 aaKnown RBP17.1■□□□□ 0.33
SMARCD1-209ENST00000550477 MAP6D1Q9H9H5 199 aa17.1■□□□□ 0.33
SMARCD1-209ENST00000550477 MEIS3P1A6NDR6 274 aa17.09■□□□□ 0.33
SMARCD1-209ENST00000550477 TAS2R46P59540 309 aa17.09■□□□□ 0.33
SMARCD1-209ENST00000550477 OR5H2Q8NGV7 314 aa17.09■□□□□ 0.33
SMARCD1-209ENST00000550477 OR6F1Q8NGZ6 308 aa17.09■□□□□ 0.33
SMARCD1-209ENST00000550477 MOB3AQ96BX8 217 aa17.09■□□□□ 0.33
SMARCD1-209ENST00000550477 CHRDL1Q9BU40 450 aa17.09■□□□□ 0.33
SMARCD1-209ENST00000550477 GPR31O00270 319 aa17.08■□□□□ 0.32
SMARCD1-209ENST00000550477 YIF1AO95070 293 aa17.08■□□□□ 0.32
SMARCD1-209ENST00000550477 G6PCP35575 357 aa17.08■□□□□ 0.32
SMARCD1-209ENST00000550477 PAFAH1B2P68402 229 aa17.08■□□□□ 0.32
SMARCD1-209ENST00000550477 LPCAT3Q6P1A2 487 aa17.08■□□□□ 0.32
SMARCD1-209ENST00000550477 FCAMRQ8WWV6 532 aa17.08■□□□□ 0.32
SMARCD1-209ENST00000550477 CSTL1Q9H114 145 aa17.08■□□□□ 0.32
SMARCD1-209ENST00000550477 RNF167Q9H6Y7 350 aa17.08■□□□□ 0.32
SMARCD1-209ENST00000550477 SMPXQ9UHP9 88 aa17.08■□□□□ 0.32
SMARCD1-209ENST00000550477 NSG2Q9Y328 171 aa17.08■□□□□ 0.32
SMARCD1-209ENST00000550477 MPTX1A8MV57 137 aa17.07■□□□□ 0.32
SMARCD1-209ENST00000550477 ZNF207O43670 478 aaKnown RBP17.07■□□□□ 0.32
SMARCD1-209ENST00000550477 CD5P06127 495 aa17.07■□□□□ 0.32
SMARCD1-209ENST00000550477 RFX2P48378 723 aa17.07■□□□□ 0.32
SMARCD1-209ENST00000550477 MFAP4P55083 255 aa17.07■□□□□ 0.32
SMARCD1-209ENST00000550477 TMEM116Q8NCL8 245 aa17.07■□□□□ 0.32
SMARCD1-209ENST00000550477 OR1P1Q8NH06 330 aa17.07■□□□□ 0.32
SMARCD1-209ENST00000550477 GATAD1Q8WUU5 269 aa17.07■□□□□ 0.32
SMARCD1-209ENST00000550477 TXN2Q99757 166 aa17.07■□□□□ 0.32
SMARCD1-209ENST00000550477 IGHV3OR16-8A0A075B7F1 116 aa17.06■□□□□ 0.32
SMARCD1-209ENST00000550477 PMP2P02689 132 aa17.06■□□□□ 0.32
SMARCD1-209ENST00000550477 EIF4EP06730 217 aaKnown RBP17.06■□□□□ 0.32
SMARCD1-209ENST00000550477 EWSR1Q01844 656 aaKnown RBP eCLIP17.06■□□□□ 0.32
SMARCD1-209ENST00000550477 TMEM69Q5SWH9 247 aa17.06■□□□□ 0.32
SMARCD1-209ENST00000550477 PHLDA1Q8WV24 401 aaPredicted RBP17.06■□□□□ 0.32
SMARCD1-209ENST00000550477 RHPN1-AS1Q9BWJ2 59 aa17.06■□□□□ 0.32
SMARCD1-209ENST00000550477 MFFQ9GZY8 342 aa17.06■□□□□ 0.32
SMARCD1-209ENST00000550477 ALMS1Q8TCU4 4167 aa17.05■□□□□ 0.32
SMARCD1-209ENST00000550477 TRAV14DV4A0A0A6YYC5 116 aa17.05■□□□□ 0.32
SMARCD1-209ENST00000550477 IGHV7-4-1A0A0J9YVY3 117 aa17.05■□□□□ 0.32
SMARCD1-209ENST00000550477 K7EIM0 57 aa17.05■□□□□ 0.32
SMARCD1-209ENST00000550477 IFNA4P05014 189 aa17.05■□□□□ 0.32
SMARCD1-209ENST00000550477 CTSGP08311 255 aa17.05■□□□□ 0.32
SMARCD1-209ENST00000550477 ADMP35318 185 aa17.05■□□□□ 0.32
SMARCD1-209ENST00000550477 MFAP2P55001 183 aa17.05■□□□□ 0.32
SMARCD1-209ENST00000550477 MISP3Q96FF7 219 aa17.05■□□□□ 0.32
SMARCD1-209ENST00000550477 RNF2Q99496 336 aa17.05■□□□□ 0.32
SMARCD1-209ENST00000550477 RARRES2Q99969 163 aa17.05■□□□□ 0.32
SMARCD1-209ENST00000550477 CHEK1O14757 476 aa17.04■□□□□ 0.32
SMARCD1-209ENST00000550477 TSPAN5P62079 268 aa17.04■□□□□ 0.32
SMARCD1-209ENST00000550477 PLECQ15149 4684 aaKnown RBP17.04■□□□□ 0.32
SMARCD1-209ENST00000550477 UBE2NLQ5JXB2 153 aa17.04■□□□□ 0.32
SMARCD1-209ENST00000550477 APRG1Q8IVJ8 170 aa17.04■□□□□ 0.32
SMARCD1-209ENST00000550477 OR4A16Q8NH70 328 aa17.04■□□□□ 0.32
SMARCD1-209ENST00000550477 SLC25A46Q96AG3 418 aa17.04■□□□□ 0.32
SMARCD1-209ENST00000550477 GINS3Q9BRX5 216 aa17.04■□□□□ 0.32
SMARCD1-209ENST00000550477 FAM212BQ9NTI7 297 aaPredicted RBP17.04■□□□□ 0.32
SMARCD1-209ENST00000550477 C15orf61A6NNL5 157 aa17.03■□□□□ 0.32
SMARCD1-209ENST00000550477 GNG7O60262 68 aa17.03■□□□□ 0.32
SMARCD1-209ENST00000550477 PRSS3P35030 304 aa17.03■□□□□ 0.32
SMARCD1-209ENST00000550477 TFPI2P48307 235 aa17.03■□□□□ 0.32
SMARCD1-209ENST00000550477 LGALS9CQ6DKI2 356 aa17.03■□□□□ 0.32
SMARCD1-209ENST00000550477 H2BFWTQ7Z2G1 175 aa17.03■□□□□ 0.32
SMARCD1-209ENST00000550477 TMEM14BQ9NUH8 114 aa17.03■□□□□ 0.32
SMARCD1-209ENST00000550477 F8W735 103 aaPredicted RBP17.02■□□□□ 0.32
SMARCD1-209ENST00000550477 FCGR2BP31994 310 aaPredicted RBP17.02■□□□□ 0.32
SMARCD1-209ENST00000550477 ERHP84090 104 aaKnown RBP17.02■□□□□ 0.32
SMARCD1-209ENST00000550477 NEDD8Q15843 81 aa17.02■□□□□ 0.32
SMARCD1-209ENST00000550477 C11orf45Q8TAV5 145 aa17.02■□□□□ 0.32
SMARCD1-209ENST00000550477 OR10C1Q96KK4 312 aa17.02■□□□□ 0.32
SMARCD1-209ENST00000550477 IGKV3-7A0A075B6H7 116 aa17.01■□□□□ 0.31
SMARCD1-209ENST00000550477 NAT1P18440 290 aa17.01■□□□□ 0.31
SMARCD1-209ENST00000550477 TAS2R20P59543 309 aa17.01■□□□□ 0.31
SMARCD1-209ENST00000550477 SAMD12Q8N8I0 201 aa17.01■□□□□ 0.31
SMARCD1-209ENST00000550477 ANAPC10Q9UM13 185 aa17.01■□□□□ 0.31
SMARCD1-209ENST00000550477 SMIM31A0A1B0GVY4 71 aa17■□□□□ 0.31
SMARCD1-209ENST00000550477 DNASE2O00115 360 aaPredicted RBP17■□□□□ 0.31
SMARCD1-209ENST00000550477 RBMS2Q15434 407 aaKnown RBP17■□□□□ 0.31
SMARCD1-209ENST00000550477 NXF2Q9GZY0 626 aaKnown RBP17■□□□□ 0.31
SMARCD1-209ENST00000550477 HRH1P35367 487 aa16.99■□□□□ 0.31
SMARCD1-209ENST00000550477 NPBWR1P48145 328 aa16.99■□□□□ 0.31
SMARCD1-209ENST00000550477 PHLDA2Q53GA4 152 aa16.99■□□□□ 0.31
SMARCD1-209ENST00000550477 OR11H2Q8NH07 326 aa16.99■□□□□ 0.31
SMARCD1-209ENST00000550477 PINX1Q96BK5 328 aaKnown RBP16.99■□□□□ 0.31
SMARCD1-209ENST00000550477 IGHV3-49A0A0A0MS15 119 aa16.98■□□□□ 0.31
SMARCD1-209ENST00000550477 I3L2K1 104 aa16.98■□□□□ 0.31
SMARCD1-209ENST00000550477 ATP6V1G2O95670 118 aa16.98■□□□□ 0.31
SMARCD1-209ENST00000550477 MT-CO2P00403 227 aa16.98■□□□□ 0.31
SMARCD1-209ENST00000550477 HLA-DMAP28067 261 aa16.98■□□□□ 0.31
SMARCD1-209ENST00000550477 PRCDQ00LT1 54 aa16.98■□□□□ 0.31
SMARCD1-209ENST00000550477 GBGT1Q8N5D6 347 aa16.98■□□□□ 0.31
SMARCD1-209ENST00000550477 ZNF114Q8NC26 417 aa16.98■□□□□ 0.31
SMARCD1-209ENST00000550477 DUSP18Q8NEJ0 188 aa16.98■□□□□ 0.31
SMARCD1-209ENST00000550477 FXYD6Q9H0Q3 95 aa16.98■□□□□ 0.31
SMARCD1-209ENST00000550477 FBXL17Q9UF56 701 aa16.98■□□□□ 0.31
SMARCD1-209ENST00000550477 DFFBO76075 338 aa16.97■□□□□ 0.31
SMARCD1-209ENST00000550477 SNCAP37840 140 aa16.97■□□□□ 0.31
SMARCD1-209ENST00000550477 TCTAP57738 103 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms