RNA–Protein interactions for RNA: ENST00000546898.1

DDX54-204, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-204ENST00000546898 Q8N402 240 aa12.09□□□□□ -0.47
DDX54-204ENST00000546898 OR51S1Q8NGJ8 323 aa12.09□□□□□ -0.47
DDX54-204ENST00000546898 C5orf66Q9H5L9 145 aa12.09□□□□□ -0.47
DDX54-204ENST00000546898 NAA60Q9H7X0 242 aa12.09□□□□□ -0.47
DDX54-204ENST00000546898 GPR132Q9UNW8 380 aa12.09□□□□□ -0.47
DDX54-204ENST00000546898 V9GYH0 126 aa12.09□□□□□ -0.47
DDX54-204ENST00000546898 DNAH9Q9NYC9 4486 aa12.08□□□□□ -0.48
DDX54-204ENST00000546898 A8MWP6 167 aa12.08□□□□□ -0.48
DDX54-204ENST00000546898 OR2C1O95371 312 aa12.08□□□□□ -0.48
DDX54-204ENST00000546898 HLA-AP01891 365 aaKnown RBP12.08□□□□□ -0.48
DDX54-204ENST00000546898 NHLRC4P0CG21 123 aaPredicted RBP12.08□□□□□ -0.48
DDX54-204ENST00000546898 GPR183P32249 361 aa12.08□□□□□ -0.48
DDX54-204ENST00000546898 FAUP35544 74 aaKnown RBP12.08□□□□□ -0.48
DDX54-204ENST00000546898 FAM106AQ4KMX7 169 aa12.08□□□□□ -0.48
DDX54-204ENST00000546898 OR2C3Q8N628 320 aa12.08□□□□□ -0.48
DDX54-204ENST00000546898 ZNF114Q8NC26 417 aa12.08□□□□□ -0.48
DDX54-204ENST00000546898 OR1P1Q8NH06 330 aa12.08□□□□□ -0.48
DDX54-204ENST00000546898 RRNAD1Q96FB5 475 aaKnown RBP12.08□□□□□ -0.48
DDX54-204ENST00000546898 SCGB3A2Q96PL1 93 aa12.08□□□□□ -0.48
DDX54-204ENST00000546898 RTBDNQ9BSG5 229 aaPredicted RBP12.08□□□□□ -0.48
DDX54-204ENST00000546898 THAP7Q9BT49 309 aaPredicted RBP12.08□□□□□ -0.48
DDX54-204ENST00000546898 TMEM222Q9H0R3 208 aa12.08□□□□□ -0.48
DDX54-204ENST00000546898 PLEKHA3Q9HB20 300 aa12.08□□□□□ -0.48
DDX54-204ENST00000546898 TEX13DA0A0J9YY54 714 aaPredicted RBP12.07□□□□□ -0.48
DDX54-204ENST00000546898 CRYM-AS1A6NIL9 109 aa12.07□□□□□ -0.48
DDX54-204ENST00000546898 CDS2O95674 445 aa12.07□□□□□ -0.48
DDX54-204ENST00000546898 CLEC3BP05452 202 aa12.07□□□□□ -0.48
DDX54-204ENST00000546898 OR5AC1P0C628 307 aa12.07□□□□□ -0.48
DDX54-204ENST00000546898 MFAP2P55001 183 aa12.07□□□□□ -0.48
DDX54-204ENST00000546898 AP3S2P59780 193 aa12.07□□□□□ -0.48
DDX54-204ENST00000546898 DHODHQ02127 395 aa12.07□□□□□ -0.48
DDX54-204ENST00000546898 SP6Q3SY56 376 aa12.07□□□□□ -0.48
DDX54-204ENST00000546898 PYDC2Q56P42 97 aa12.07□□□□□ -0.48
DDX54-204ENST00000546898 CCDC190Q86UF4 302 aa12.07□□□□□ -0.48
DDX54-204ENST00000546898 FAM219AQ8IW50 185 aa12.07□□□□□ -0.48
DDX54-204ENST00000546898 RNASE11Q8TAA1 199 aaKnown RBP12.07□□□□□ -0.48
DDX54-204ENST00000546898 DEDD2Q8WXF8 326 aa12.07□□□□□ -0.48
DDX54-204ENST00000546898 TRIM63Q969Q1 353 aa12.07□□□□□ -0.48
DDX54-204ENST00000546898 MCUBQ9NWR8 336 aa12.07□□□□□ -0.48
DDX54-204ENST00000546898 C2orf70A6NJV1 201 aa12.06□□□□□ -0.48
DDX54-204ENST00000546898 INS-IGF2F8WCM5 200 aa12.06□□□□□ -0.48
DDX54-204ENST00000546898 TGOLN2O43493 480 aa12.06□□□□□ -0.48
DDX54-204ENST00000546898 ERHP84090 104 aaKnown RBP12.06□□□□□ -0.48
DDX54-204ENST00000546898 SPSB3Q6PJ21 355 aa12.06□□□□□ -0.48
DDX54-204ENST00000546898 PLET1Q6UQ28 207 aa12.06□□□□□ -0.48
DDX54-204ENST00000546898 DYNLRB2Q8TF09 96 aa12.06□□□□□ -0.48
DDX54-204ENST00000546898 RBPMSQ93062 196 aaKnown RBP12.06□□□□□ -0.48
DDX54-204ENST00000546898 BSCL2Q96G97 398 aaPredicted RBP12.06□□□□□ -0.48
DDX54-204ENST00000546898 PDCD10Q9BUL8 212 aa12.06□□□□□ -0.48
DDX54-204ENST00000546898 C21orf62Q9NYP8 219 aa12.06□□□□□ -0.48
DDX54-204ENST00000546898 A0A0B4J293 547 aa12.05□□□□□ -0.48
DDX54-204ENST00000546898 K7EIM0 57 aa12.05□□□□□ -0.48
DDX54-204ENST00000546898 FOLR2P14207 255 aa12.05□□□□□ -0.48
DDX54-204ENST00000546898 ETV6P41212 452 aa12.05□□□□□ -0.48
DDX54-204ENST00000546898 KLF9Q13886 244 aaPredicted RBP12.05□□□□□ -0.48
DDX54-204ENST00000546898 ZNF79Q15937 498 aa12.05□□□□□ -0.48
DDX54-204ENST00000546898 IZUMO4Q1ZYL8 232 aa12.05□□□□□ -0.48
DDX54-204ENST00000546898 ADAMTSL5Q6ZMM2 481 aa12.05□□□□□ -0.48
DDX54-204ENST00000546898 SGPP2Q8IWX5 399 aa12.05□□□□□ -0.48
DDX54-204ENST00000546898 TOMM5Q8N4H5 51 aa12.05□□□□□ -0.48
DDX54-204ENST00000546898 SLC35G3Q8N808 338 aa12.05□□□□□ -0.48
DDX54-204ENST00000546898 SCARB1Q8WTV0 552 aa12.05□□□□□ -0.48
DDX54-204ENST00000546898 GLYATL2Q8WU03 294 aa12.05□□□□□ -0.48
DDX54-204ENST00000546898 GALNT14Q96FL9 552 aa12.05□□□□□ -0.48
DDX54-204ENST00000546898 PALMDQ9NP74 551 aa12.05□□□□□ -0.48
DDX54-204ENST00000546898 GAR1Q9NY12 217 aaKnown RBP12.05□□□□□ -0.48
DDX54-204ENST00000546898 TECRQ9NZ01 308 aaKnown RBP12.05□□□□□ -0.48
DDX54-204ENST00000546898 TMEM213A2RRL7 107 aa12.04□□□□□ -0.48
DDX54-204ENST00000546898 ST8SIA3O43173 380 aa12.04□□□□□ -0.48
DDX54-204ENST00000546898 ELLP55199 621 aaPredicted RBP12.04□□□□□ -0.48
DDX54-204ENST00000546898 SPANXN2Q5MJ10 180 aa12.04□□□□□ -0.48
DDX54-204ENST00000546898 C11orf87Q6NUJ2 197 aa12.04□□□□□ -0.48
DDX54-204ENST00000546898 GTSCR1Q86UQ5 136 aa12.04□□□□□ -0.48
DDX54-204ENST00000546898 ZNF436Q9C0F3 470 aaPredicted RBP12.04□□□□□ -0.48
DDX54-204ENST00000546898 KCNIP3Q9Y2W7 256 aa12.04□□□□□ -0.48
DDX54-204ENST00000546898 TMEM56-RWDD3S4R434 201 aa12.04□□□□□ -0.48
DDX54-204ENST00000546898 A0A0G2JRQ6 117 aa12.03□□□□□ -0.48
DDX54-204ENST00000546898 ZNF320A2RRD8 509 aa12.03□□□□□ -0.48
DDX54-204ENST00000546898 A8MZ25 164 aa12.03□□□□□ -0.48
DDX54-204ENST00000546898 IFNA17P01571 189 aa12.03□□□□□ -0.48
DDX54-204ENST00000546898 FCGR2BP31994 310 aaPredicted RBP12.03□□□□□ -0.48
DDX54-204ENST00000546898 DEFB114Q30KQ6 69 aa12.03□□□□□ -0.48
DDX54-204ENST00000546898 CD300EQ496F6 205 aaPredicted RBP12.03□□□□□ -0.48
DDX54-204ENST00000546898 AARDQ4LEZ3 155 aa12.03□□□□□ -0.48
DDX54-204ENST00000546898 SELENOHQ8IZQ5 122 aaKnown RBP12.03□□□□□ -0.48
DDX54-204ENST00000546898 Q8N1Y9 231 aa12.03□□□□□ -0.48
DDX54-204ENST00000546898 LHFPL5Q8TAF8 219 aa12.03□□□□□ -0.48
DDX54-204ENST00000546898 TMEM190Q8WZ59 177 aa12.03□□□□□ -0.48
DDX54-204ENST00000546898 IL22RA2Q969J5 263 aa12.03□□□□□ -0.48
DDX54-204ENST00000546898 MARC2Q969Z3 335 aa12.03□□□□□ -0.48
DDX54-204ENST00000546898 TMEM230Q96A57 120 aa12.03□□□□□ -0.48
DDX54-204ENST00000546898 ZC4H2Q9NQZ6 224 aa12.03□□□□□ -0.48
DDX54-204ENST00000546898 NDUFA13Q9P0J0 144 aa12.03□□□□□ -0.48
DDX54-204ENST00000546898 UFC1Q9Y3C8 167 aa12.03□□□□□ -0.48
DDX54-204ENST00000546898 IGHV3-21A0A0B4J1V1 117 aa12.02□□□□□ -0.49
DDX54-204ENST00000546898 IZUMO1RA6ND01 250 aa12.02□□□□□ -0.49
DDX54-204ENST00000546898 OR2T8A6NH00 312 aa12.02□□□□□ -0.49
DDX54-204ENST00000546898 F8W735 103 aaPredicted RBP12.02□□□□□ -0.49
DDX54-204ENST00000546898 I3L2K1 104 aa12.02□□□□□ -0.49
DDX54-204ENST00000546898 FRMD6-AS1P0C7T7 363 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms