RNA–Protein interactions for RNA: ENST00000546386.1

CCDC38-202, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-202ENST00000546386 IL34Q6ZMJ4 242 aa9.61□□□□□ -0.87
CCDC38-202ENST00000546386 OR51G1Q8NGK1 321 aa9.61□□□□□ -0.87
CCDC38-202ENST00000546386 CLDND2Q8NHS1 167 aa9.61□□□□□ -0.87
CCDC38-202ENST00000546386 RAB24Q969Q5 203 aa9.61□□□□□ -0.87
CCDC38-202ENST00000546386 TMEM186Q96B77 213 aa9.61□□□□□ -0.87
CCDC38-202ENST00000546386 CIB3Q96Q77 187 aaPredicted RBP9.61□□□□□ -0.87
CCDC38-202ENST00000546386 CCL19Q99731 98 aa9.61□□□□□ -0.87
CCDC38-202ENST00000546386 MAP1LC3BQ9GZQ8 125 aa9.61□□□□□ -0.87
CCDC38-202ENST00000546386 RPS10P5Q9NQ39 176 aa9.61□□□□□ -0.87
CCDC38-202ENST00000546386 PDLIM3Q53GG5 364 aaPredicted RBP9.61□□□□□ -0.87
CCDC38-202ENST00000546386 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.61□□□□□ -0.87
CCDC38-202ENST00000546386 UHRF2Q96PU4 802 aa9.61□□□□□ -0.87
CCDC38-202ENST00000546386 URGCP-MRPS24S4R325 110 aa9.61□□□□□ -0.87
CCDC38-202ENST00000546386 A0A1W2PPI3 338 aa9.6□□□□□ -0.87
CCDC38-202ENST00000546386 IL6RP08887 468 aaPredicted RBP9.6□□□□□ -0.87
CCDC38-202ENST00000546386 OPRK1P41145 380 aa9.6□□□□□ -0.87
CCDC38-202ENST00000546386 PRRX1P54821 245 aa9.6□□□□□ -0.87
CCDC38-202ENST00000546386 ATP5J2P56134 94 aa9.6□□□□□ -0.87
CCDC38-202ENST00000546386 ZNF90Q03938 601 aa9.6□□□□□ -0.87
CCDC38-202ENST00000546386 CLEC12BQ2HXU8 276 aa9.6□□□□□ -0.87
CCDC38-202ENST00000546386 FAM120AOSQ5T036 256 aa9.6□□□□□ -0.87
CCDC38-202ENST00000546386 ABHD5Q8WTS1 349 aa9.6□□□□□ -0.87
CCDC38-202ENST00000546386 NCOR1P1Q9H4R4 102 aa9.6□□□□□ -0.87
CCDC38-202ENST00000546386 IGHV4-61A0A0C4DH41 118 aa9.6□□□□□ -0.87
CCDC38-202ENST00000546386 HNF1AP20823 631 aa9.6□□□□□ -0.87
CCDC38-202ENST00000546386 EFNA4P52798 201 aa9.6□□□□□ -0.87
CCDC38-202ENST00000546386 TLE4Q04727 773 aa9.6□□□□□ -0.87
CCDC38-202ENST00000546386 MRGPRG-AS1Q2M3A8 158 aa9.6□□□□□ -0.87
CCDC38-202ENST00000546386 ZNF429Q86V71 674 aa9.6□□□□□ -0.87
CCDC38-202ENST00000546386 TCTEX1D1Q8N7M0 179 aa9.6□□□□□ -0.87
CCDC38-202ENST00000546386 LYPD6BQ8NI32 183 aa9.6□□□□□ -0.87
CCDC38-202ENST00000546386 NEU4Q8WWR8 484 aaPredicted RBP9.6□□□□□ -0.87
CCDC38-202ENST00000546386 ADTRPQ96IZ2 230 aa9.6□□□□□ -0.87
CCDC38-202ENST00000546386 FNDC4Q9H6D8 234 aaPredicted RBP9.6□□□□□ -0.87
CCDC38-202ENST00000546386 UNC79Q9P2D8 2635 aa9.6□□□□□ -0.87
CCDC38-202ENST00000546386 FOXA2Q9Y261 457 aaPredicted RBP9.6□□□□□ -0.87
CCDC38-202ENST00000546386 IGHV3OR16-8A0A075B7F1 116 aa9.59□□□□□ -0.87
CCDC38-202ENST00000546386 DNASE2O00115 360 aaPredicted RBP9.59□□□□□ -0.87
CCDC38-202ENST00000546386 YIF1AO95070 293 aa9.59□□□□□ -0.87
CCDC38-202ENST00000546386 CNIH1O95406 144 aa9.59□□□□□ -0.87
CCDC38-202ENST00000546386 IGHV3-23P01764 117 aa9.59□□□□□ -0.87
CCDC38-202ENST00000546386 KIR2DS2P43631 304 aa9.59□□□□□ -0.87
CCDC38-202ENST00000546386 GAMTQ14353 236 aa9.59□□□□□ -0.87
CCDC38-202ENST00000546386 ICAM4Q14773 271 aa9.59□□□□□ -0.87
CCDC38-202ENST00000546386 IGHV4-30-2A0A087WSY4 118 aa9.59□□□□□ -0.87
CCDC38-202ENST00000546386 TRBV23-1A0A0A0MS06 115 aa9.59□□□□□ -0.87
CCDC38-202ENST00000546386 IGHV3-35A0A0C4DH35 117 aa9.59□□□□□ -0.87
CCDC38-202ENST00000546386 MOSP00540 346 aa9.59□□□□□ -0.87
CCDC38-202ENST00000546386 OR10J4P0C629 311 aa9.59□□□□□ -0.87
CCDC38-202ENST00000546386 HTR1DP28221 377 aa9.59□□□□□ -0.87
CCDC38-202ENST00000546386 PRCDQ00LT1 54 aa9.59□□□□□ -0.87
CCDC38-202ENST00000546386 ZFP82Q8N141 532 aa9.59□□□□□ -0.87
CCDC38-202ENST00000546386 RPUSD4Q96CM3 377 aaKnown RBP9.59□□□□□ -0.87
CCDC38-202ENST00000546386 RAB39BQ96DA2 213 aa9.59□□□□□ -0.87
CCDC38-202ENST00000546386 LINC00527Q9UJ94 153 aa9.59□□□□□ -0.87
CCDC38-202ENST00000546386 PRNDQ9UKY0 176 aa9.59□□□□□ -0.87
CCDC38-202ENST00000546386 PXMP4Q9Y6I8 212 aa9.59□□□□□ -0.87
CCDC38-202ENST00000546386 PGPEP1LA6NFU8 196 aa9.58□□□□□ -0.88
CCDC38-202ENST00000546386 PRSS46E5RG02 174 aa9.58□□□□□ -0.88
CCDC38-202ENST00000546386 H3BTX0 84 aa9.58□□□□□ -0.88
CCDC38-202ENST00000546386 TRIM77I1YAP6 450 aa9.58□□□□□ -0.88
CCDC38-202ENST00000546386 ITGB1BP1O14713 200 aa9.58□□□□□ -0.88
CCDC38-202ENST00000546386 PAGE4O60829 102 aa9.58□□□□□ -0.88
CCDC38-202ENST00000546386 MFAP2P55001 183 aa9.58□□□□□ -0.88
CCDC38-202ENST00000546386 AWAT1Q58HT5 328 aa9.58□□□□□ -0.88
CCDC38-202ENST00000546386 TMEM41BQ5BJD5 291 aa9.58□□□□□ -0.88
CCDC38-202ENST00000546386 SOHLH1Q5JUK2 328 aa9.58□□□□□ -0.88
CCDC38-202ENST00000546386 MORN5Q5VZ52 161 aa9.58□□□□□ -0.88
CCDC38-202ENST00000546386 CST9LP1Q5W188 147 aa9.58□□□□□ -0.88
CCDC38-202ENST00000546386 TMEM219Q86XT9 240 aa9.58□□□□□ -0.88
CCDC38-202ENST00000546386 SVBPQ8N300 66 aa9.58□□□□□ -0.88
CCDC38-202ENST00000546386 OSR1Q8TAX0 266 aaPredicted RBP9.58□□□□□ -0.88
CCDC38-202ENST00000546386 NPIPB3Q92617 1050 aa9.58□□□□□ -0.88
CCDC38-202ENST00000546386 TNFRSF19Q9NS68 423 aa9.58□□□□□ -0.88
CCDC38-202ENST00000546386 TRAV5A0A0B4J249 113 aa9.58□□□□□ -0.88
CCDC38-202ENST00000546386 A0A1W2PPE2 198 aa9.58□□□□□ -0.88
CCDC38-202ENST00000546386 RAB5CP51148 216 aa9.58□□□□□ -0.88
CCDC38-202ENST00000546386 PSG5Q15238 335 aa9.58□□□□□ -0.88
CCDC38-202ENST00000546386 STPG3Q8N7X2 389 aa9.58□□□□□ -0.88
CCDC38-202ENST00000546386 P2RX4Q99571 388 aa9.58□□□□□ -0.88
CCDC38-202ENST00000546386 GGTLC1Q9BX51 225 aa9.58□□□□□ -0.88
CCDC38-202ENST00000546386 NDUFA4L2Q9NRX3 87 aa9.58□□□□□ -0.88
CCDC38-202ENST00000546386 TOX4O94842 621 aa9.57□□□□□ -0.88
CCDC38-202ENST00000546386 SCAF4O95104 1147 aaKnown RBP9.57□□□□□ -0.88
CCDC38-202ENST00000546386 IGHV2-5P01817 119 aa9.57□□□□□ -0.88
CCDC38-202ENST00000546386 RNASE2P10153 161 aaKnown RBP9.57□□□□□ -0.88
CCDC38-202ENST00000546386 OR10J1P30954 320 aa9.57□□□□□ -0.88
CCDC38-202ENST00000546386 B2MP61769 119 aa9.57□□□□□ -0.88
CCDC38-202ENST00000546386 LMO4P61968 165 aa9.57□□□□□ -0.88
CCDC38-202ENST00000546386 PEA15Q15121 130 aa9.57□□□□□ -0.88
CCDC38-202ENST00000546386 TMEM177Q53S58 311 aa9.57□□□□□ -0.88
CCDC38-202ENST00000546386 LEMD1Q68G75 181 aa9.57□□□□□ -0.88
CCDC38-202ENST00000546386 UQCC3Q6UW78 93 aa9.57□□□□□ -0.88
CCDC38-202ENST00000546386 TNFRSF14Q92956 283 aa9.57□□□□□ -0.88
CCDC38-202ENST00000546386 DERL1Q9BUN8 251 aa9.57□□□□□ -0.88
CCDC38-202ENST00000546386 SEC11CQ9BY50 192 aa9.57□□□□□ -0.88
CCDC38-202ENST00000546386 KRTAP3-3Q9BYR6 98 aa9.57□□□□□ -0.88
CCDC38-202ENST00000546386 KRTAP3-2Q9BYR7 98 aa9.57□□□□□ -0.88
CCDC38-202ENST00000546386 SLC35B3Q9H1N7 401 aa9.57□□□□□ -0.88
CCDC38-202ENST00000546386 A0A1W2PPV4 95 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms