RNA–Protein interactions for RNA: ENST00000545083.1

CHD4-212, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 511 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-212ENST00000545083 IFNA21P01568 189 aa6.71□□□□□ -1.34
CHD4-212ENST00000545083 IFNA17P01571 189 aa6.71□□□□□ -1.34
CHD4-212ENST00000545083 APOHP02749 345 aaPredicted RBP6.71□□□□□ -1.34
CHD4-212ENST00000545083 SERPINE2P07093 398 aa6.71□□□□□ -1.34
CHD4-212ENST00000545083 Q56UQ5 140 aa6.71□□□□□ -1.34
CHD4-212ENST00000545083 TMEM91Q6ZNR0 172 aa6.71□□□□□ -1.34
CHD4-212ENST00000545083 STHQ8IWL8 128 aa6.71□□□□□ -1.34
CHD4-212ENST00000545083 ST8SIA2Q92186 375 aa6.71□□□□□ -1.34
CHD4-212ENST00000545083 DGCR14Q96DF8 476 aaKnown RBP6.71□□□□□ -1.34
CHD4-212ENST00000545083 CMTM3Q96MX0 182 aa6.71□□□□□ -1.34
CHD4-212ENST00000545083 ATP6V0BQ99437 205 aa6.71□□□□□ -1.34
CHD4-212ENST00000545083 SRSF8Q9BRL6 282 aaKnown RBP6.71□□□□□ -1.34
CHD4-212ENST00000545083 QTRT1Q9BXR0 403 aaKnown RBP6.71□□□□□ -1.34
CHD4-212ENST00000545083 COMMD5Q9GZQ3 224 aa6.71□□□□□ -1.34
CHD4-212ENST00000545083 SMPD3Q9NY59 655 aaPredicted RBP6.71□□□□□ -1.34
CHD4-212ENST00000545083 PSORS1C1Q9UIG5 152 aa6.71□□□□□ -1.34
CHD4-212ENST00000545083 TBC1D24Q9ULP9 559 aa6.71□□□□□ -1.34
CHD4-212ENST00000545083 F11RQ9Y624 299 aaKnown RBP6.71□□□□□ -1.34
CHD4-212ENST00000545083 IGHV3-66A0A0C4DH42 116 aa6.7□□□□□ -1.34
CHD4-212ENST00000545083 TNFSF12O43508 249 aa6.7□□□□□ -1.34
CHD4-212ENST00000545083 SLC22A5O76082 557 aa6.7□□□□□ -1.34
CHD4-212ENST00000545083 YIF1AO95070 293 aa6.7□□□□□ -1.34
CHD4-212ENST00000545083 PAFAH1B2P68402 229 aa6.7□□□□□ -1.34
CHD4-212ENST00000545083 HES5Q5TA89 166 aa6.7□□□□□ -1.34
CHD4-212ENST00000545083 LIPKQ5VXJ0 399 aa6.7□□□□□ -1.34
CHD4-212ENST00000545083 MORN3Q6PF18 240 aaPredicted RBP6.7□□□□□ -1.34
CHD4-212ENST00000545083 ZNF773Q6PK81 442 aa6.7□□□□□ -1.34
CHD4-212ENST00000545083 IZUMO2Q6UXV1 221 aa6.7□□□□□ -1.34
CHD4-212ENST00000545083 ZNF66Q6ZN08 573 aa6.7□□□□□ -1.34
CHD4-212ENST00000545083 SPAG16Q8N0X2 631 aa6.7□□□□□ -1.34
CHD4-212ENST00000545083 TMEM203Q969S6 136 aa6.7□□□□□ -1.34
CHD4-212ENST00000545083 VSIRQ9H7M9 311 aa6.7□□□□□ -1.34
CHD4-212ENST00000545083 RAB22AQ9UL26 194 aa6.7□□□□□ -1.34
CHD4-212ENST00000545083 FAT1Q14517 4588 aa6.69□□□□□ -1.34
CHD4-212ENST00000545083 TRAV14DV4A0A0A6YYC5 116 aa6.69□□□□□ -1.34
CHD4-212ENST00000545083 TEX50A0A1B0GTY4 177 aa6.69□□□□□ -1.34
CHD4-212ENST00000545083 DNASE2O00115 360 aaPredicted RBP6.69□□□□□ -1.34
CHD4-212ENST00000545083 SPP1P10451 314 aa6.69□□□□□ -1.34
CHD4-212ENST00000545083 TALDO1P37837 337 aa6.69□□□□□ -1.34
CHD4-212ENST00000545083 SSX1Q16384 188 aa6.69□□□□□ -1.34
CHD4-212ENST00000545083 POU2AF1Q16633 256 aa6.69□□□□□ -1.34
CHD4-212ENST00000545083 RNF212Q495C1 297 aa6.69□□□□□ -1.34
CHD4-212ENST00000545083 TMEM41BQ5BJD5 291 aa6.69□□□□□ -1.34
CHD4-212ENST00000545083 NRG4Q8WWG1 115 aa6.69□□□□□ -1.34
CHD4-212ENST00000545083 CYGBQ8WWM9 190 aa6.69□□□□□ -1.34
CHD4-212ENST00000545083 CCL28Q9NRJ3 127 aa6.69□□□□□ -1.34
CHD4-212ENST00000545083 TMEM14BQ9NUH8 114 aa6.69□□□□□ -1.34
CHD4-212ENST00000545083 TMEM140Q9NV12 185 aa6.69□□□□□ -1.34
CHD4-212ENST00000545083 RAB26Q9ULW5 256 aa6.69□□□□□ -1.34
CHD4-212ENST00000545083 LSM2Q9Y333 95 aaKnown RBP6.69□□□□□ -1.34
CHD4-212ENST00000545083 SRRM2Q9UQ35 2752 aaKnown RBP6.69□□□□□ -1.34
CHD4-212ENST00000545083 TRAV2A0A0B4J234 112 aa6.68□□□□□ -1.34
CHD4-212ENST00000545083 SULT1C2O00338 296 aa6.68□□□□□ -1.34
CHD4-212ENST00000545083 CYB5BO43169 146 aa6.68□□□□□ -1.34
CHD4-212ENST00000545083 ST8SIA3O43173 380 aa6.68□□□□□ -1.34
CHD4-212ENST00000545083 IGHV3-48P01763 117 aa6.68□□□□□ -1.34
CHD4-212ENST00000545083 TRAPPC2P0DI81 140 aa6.68□□□□□ -1.34
CHD4-212ENST00000545083 TRAPPC2BP0DI82 140 aa6.68□□□□□ -1.34
CHD4-212ENST00000545083 DTYMKP23919 212 aa6.68□□□□□ -1.34
CHD4-212ENST00000545083 GADD45AP24522 165 aa6.68□□□□□ -1.34
CHD4-212ENST00000545083 TAS2R31P59538 309 aa6.68□□□□□ -1.34
CHD4-212ENST00000545083 RPS25P62851 125 aaKnown RBP6.68□□□□□ -1.34
CHD4-212ENST00000545083 RELQ04864 619 aaPredicted RBP6.68□□□□□ -1.34
CHD4-212ENST00000545083 UBE2UQ5VVX9 321 aa6.68□□□□□ -1.34
CHD4-212ENST00000545083 TOMM20LQ6UXN7 152 aa6.68□□□□□ -1.34
CHD4-212ENST00000545083 PQLC1Q8N2U9 271 aa6.68□□□□□ -1.34
CHD4-212ENST00000545083 CENPOQ9BU64 300 aa6.68□□□□□ -1.34
CHD4-212ENST00000545083 NXF2Q9GZY0 626 aaKnown RBP6.68□□□□□ -1.34
CHD4-212ENST00000545083 C8orf4Q9NR00 106 aa6.68□□□□□ -1.34
CHD4-212ENST00000545083 NDUFA4L2Q9NRX3 87 aa6.68□□□□□ -1.34
CHD4-212ENST00000545083 FKBP14Q9NWM8 211 aa6.68□□□□□ -1.34
CHD4-212ENST00000545083 RABAC1Q9UI14 185 aa6.68□□□□□ -1.34
CHD4-212ENST00000545083 FLG2Q5D862 2391 aaPredicted RBP6.68□□□□□ -1.34
CHD4-212ENST00000545083 K7EQG2 157 aa6.67□□□□□ -1.34
CHD4-212ENST00000545083 RBFOX2O43251 390 aaKnown RBP eCLIP6.67□□□□□ -1.34
CHD4-212ENST00000545083 TNFAIP8O95379 198 aa6.67□□□□□ -1.34
CHD4-212ENST00000545083 HPRT1P00492 218 aa6.67□□□□□ -1.34
CHD4-212ENST00000545083 CTXN2P0C2S0 81 aa6.67□□□□□ -1.34
CHD4-212ENST00000545083 ZNF688P0C7X2 276 aa6.67□□□□□ -1.34
CHD4-212ENST00000545083 NQO2P16083 231 aa6.67□□□□□ -1.34
CHD4-212ENST00000545083 NPY1RP25929 384 aa6.67□□□□□ -1.34
CHD4-212ENST00000545083 RPL11P62913 178 aaKnown RBP6.67□□□□□ -1.34
CHD4-212ENST00000545083 ACTL10Q5JWF8 245 aa6.67□□□□□ -1.34
CHD4-212ENST00000545083 OGFRL1Q5TC84 451 aaPredicted RBP6.67□□□□□ -1.34
CHD4-212ENST00000545083 THOC7Q6I9Y2 204 aaKnown RBP6.67□□□□□ -1.34
CHD4-212ENST00000545083 CNIH2Q6PI25 160 aa6.67□□□□□ -1.34
CHD4-212ENST00000545083 ZNF367Q7RTV3 350 aa6.67□□□□□ -1.34
CHD4-212ENST00000545083 SPATA12Q7Z6I5 190 aa6.67□□□□□ -1.34
CHD4-212ENST00000545083 DUSP18Q8NEJ0 188 aa6.67□□□□□ -1.34
CHD4-212ENST00000545083 BPIFB6Q8NFQ5 453 aa6.67□□□□□ -1.34
CHD4-212ENST00000545083 OR1L8Q8NGR8 309 aa6.67□□□□□ -1.34
CHD4-212ENST00000545083 SECTM1Q8WVN6 248 aa6.67□□□□□ -1.34
CHD4-212ENST00000545083 LSM10Q969L4 123 aaKnown RBP6.67□□□□□ -1.34
CHD4-212ENST00000545083 HINT2Q9BX68 163 aa6.67□□□□□ -1.34
CHD4-212ENST00000545083 DCSTAMPQ9H295 470 aa6.67□□□□□ -1.34
CHD4-212ENST00000545083 PLCXD1Q9NUJ7 323 aa6.67□□□□□ -1.34
CHD4-212ENST00000545083 NSG2Q9Y328 171 aa6.67□□□□□ -1.34
CHD4-212ENST00000545083 V9GY05 133 aa6.67□□□□□ -1.34
CHD4-212ENST00000545083 I3L2K1 104 aa6.66□□□□□ -1.34
CHD4-212ENST00000545083 CD5P06127 495 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms