RNA–Protein interactions for RNA: ENST00000544622.4

YBX3-216, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 685 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-216ENST00000544622 SP6Q3SY56 376 aa8.67□□□□□ -1.02
YBX3-216ENST00000544622 AARDQ4LEZ3 155 aa8.67□□□□□ -1.02
YBX3-216ENST00000544622 PVRIGQ6DKI7 326 aa8.67□□□□□ -1.02
YBX3-216ENST00000544622 CLEC19AQ6UXS0 136 aa8.67□□□□□ -1.02
YBX3-216ENST00000544622 HAPLN4Q86UW8 402 aa8.67□□□□□ -1.02
YBX3-216ENST00000544622 Q8N1Y9 231 aa8.67□□□□□ -1.02
YBX3-216ENST00000544622 OR2C3Q8N628 320 aa8.67□□□□□ -1.02
YBX3-216ENST00000544622 CCDC71LQ8N9Z2 235 aa8.67□□□□□ -1.02
YBX3-216ENST00000544622 ZNF114Q8NC26 417 aa8.67□□□□□ -1.02
YBX3-216ENST00000544622 OR1P1Q8NH06 330 aa8.67□□□□□ -1.02
YBX3-216ENST00000544622 OR4A16Q8NH70 328 aa8.67□□□□□ -1.02
YBX3-216ENST00000544622 TMEM56Q96MV1 263 aa8.67□□□□□ -1.02
YBX3-216ENST00000544622 ATP6V0BQ99437 205 aa8.67□□□□□ -1.02
YBX3-216ENST00000544622 TMEM222Q9H0R3 208 aa8.67□□□□□ -1.02
YBX3-216ENST00000544622 PEMTQ9UBM1 199 aa8.67□□□□□ -1.02
YBX3-216ENST00000544622 S4R3C0 116 aa8.67□□□□□ -1.02
YBX3-216ENST00000544622 A0A0G2JRQ6 117 aa8.66□□□□□ -1.02
YBX3-216ENST00000544622 TEX13DA0A0J9YY54 714 aaPredicted RBP8.66□□□□□ -1.02
YBX3-216ENST00000544622 CRYM-AS1A6NIL9 109 aa8.66□□□□□ -1.02
YBX3-216ENST00000544622 K7EIM0 57 aa8.66□□□□□ -1.02
YBX3-216ENST00000544622 ARL3P36405 182 aa8.66□□□□□ -1.02
YBX3-216ENST00000544622 Q6ZRM9 215 aa8.66□□□□□ -1.02
YBX3-216ENST00000544622 Q8N402 240 aa8.66□□□□□ -1.02
YBX3-216ENST00000544622 OR1L6Q8NGR2 347 aa8.66□□□□□ -1.02
YBX3-216ENST00000544622 LHFPL5Q8TAF8 219 aa8.66□□□□□ -1.02
YBX3-216ENST00000544622 SCARB1Q8WTV0 552 aa8.66□□□□□ -1.02
YBX3-216ENST00000544622 DEDD2Q8WXF8 326 aa8.66□□□□□ -1.02
YBX3-216ENST00000544622 TMEM230Q96A57 120 aa8.66□□□□□ -1.02
YBX3-216ENST00000544622 GALNT14Q96FL9 552 aa8.66□□□□□ -1.02
YBX3-216ENST00000544622 ZNF414Q96IQ9 312 aa8.66□□□□□ -1.02
YBX3-216ENST00000544622 NAA60Q9H7X0 242 aa8.66□□□□□ -1.02
YBX3-216ENST00000544622 SMAD5-AS1Q9Y6J3 95 aa8.66□□□□□ -1.02
YBX3-216ENST00000544622 TMEM56-RWDD3S4R434 201 aa8.66□□□□□ -1.02
YBX3-216ENST00000544622 C2orf70A6NJV1 201 aa8.65□□□□□ -1.02
YBX3-216ENST00000544622 A8MWP6 167 aa8.65□□□□□ -1.02
YBX3-216ENST00000544622 A8MZ25 164 aa8.65□□□□□ -1.02
YBX3-216ENST00000544622 ATG12O94817 140 aa8.65□□□□□ -1.02
YBX3-216ENST00000544622 OR5AC1P0C628 307 aa8.65□□□□□ -1.02
YBX3-216ENST00000544622 EDN2P20800 178 aa8.65□□□□□ -1.02
YBX3-216ENST00000544622 S100A5P33763 92 aa8.65□□□□□ -1.02
YBX3-216ENST00000544622 SUPT4H1P63272 117 aaKnown RBP8.65□□□□□ -1.02
YBX3-216ENST00000544622 SLC25A24Q6NUK1 477 aa8.65□□□□□ -1.02
YBX3-216ENST00000544622 SELENOHQ8IZQ5 122 aaKnown RBP8.65□□□□□ -1.02
YBX3-216ENST00000544622 HINT2Q9BX68 163 aa8.65□□□□□ -1.02
YBX3-216ENST00000544622 ZNF436Q9C0F3 470 aaPredicted RBP8.65□□□□□ -1.02
YBX3-216ENST00000544622 SCP2D1Q9UJQ7 156 aa8.65□□□□□ -1.02
YBX3-216ENST00000544622 C14orf166Q9Y224 244 aaKnown RBP8.65□□□□□ -1.02
YBX3-216ENST00000544622 KMT2CQ8NEZ4 4911 aaKnown RBP8.64□□□□□ -1.03
YBX3-216ENST00000544622 TMEM213A2RRL7 107 aa8.64□□□□□ -1.03
YBX3-216ENST00000544622 IZUMO1RA6ND01 250 aa8.64□□□□□ -1.03
YBX3-216ENST00000544622 I3L2K1 104 aa8.64□□□□□ -1.03
YBX3-216ENST00000544622 CYB5BO43169 146 aa8.64□□□□□ -1.03
YBX3-216ENST00000544622 ST8SIA3O43173 380 aa8.64□□□□□ -1.03
YBX3-216ENST00000544622 LY86O95711 162 aa8.64□□□□□ -1.03
YBX3-216ENST00000544622 C8orf88P0DMB2 117 aa8.64□□□□□ -1.03
YBX3-216ENST00000544622 FOLR2P14207 255 aa8.64□□□□□ -1.03
YBX3-216ENST00000544622 CBLN1P23435 193 aa8.64□□□□□ -1.03
YBX3-216ENST00000544622 FCGR2BP31994 310 aaPredicted RBP8.64□□□□□ -1.03
YBX3-216ENST00000544622 GPR183P32249 361 aa8.64□□□□□ -1.03
YBX3-216ENST00000544622 DHODHQ02127 395 aa8.64□□□□□ -1.03
YBX3-216ENST00000544622 CD69Q07108 199 aa8.64□□□□□ -1.03
YBX3-216ENST00000544622 TRIM16LQ309B1 348 aa8.64□□□□□ -1.03
YBX3-216ENST00000544622 DEFB114Q30KQ6 69 aa8.64□□□□□ -1.03
YBX3-216ENST00000544622 UNQ9165/PRO28630Q6UXU0 137 aa8.64□□□□□ -1.03
YBX3-216ENST00000544622 FAM219AQ8IW50 185 aa8.64□□□□□ -1.03
YBX3-216ENST00000544622 TOMM5Q8N4H5 51 aa8.64□□□□□ -1.03
YBX3-216ENST00000544622 OR2K2Q8NGT1 345 aa8.64□□□□□ -1.03
YBX3-216ENST00000544622 RBPMSQ93062 196 aaKnown RBP8.64□□□□□ -1.03
YBX3-216ENST00000544622 SRRQ9GZT4 340 aa8.64□□□□□ -1.03
YBX3-216ENST00000544622 ZC4H2Q9NQZ6 224 aa8.64□□□□□ -1.03
YBX3-216ENST00000544622 TENM3Q9P273 2699 aa8.64□□□□□ -1.03
YBX3-216ENST00000544622 STAB2Q8WWQ8 2551 aa8.64□□□□□ -1.03
YBX3-216ENST00000544622 ZNF785A8K8V0 405 aa8.63□□□□□ -1.03
YBX3-216ENST00000544622 TGOLN2O43493 480 aa8.63□□□□□ -1.03
YBX3-216ENST00000544622 CTSGP08311 255 aa8.63□□□□□ -1.03
YBX3-216ENST00000544622 NHLRC4P0CG21 123 aaPredicted RBP8.63□□□□□ -1.03
YBX3-216ENST00000544622 ADMP35318 185 aa8.63□□□□□ -1.03
YBX3-216ENST00000544622 AKR1C2P52895 323 aa8.63□□□□□ -1.03
YBX3-216ENST00000544622 TMEM187Q14656 261 aa8.63□□□□□ -1.03
YBX3-216ENST00000544622 BSXQ3C1V8 233 aa8.63□□□□□ -1.03
YBX3-216ENST00000544622 CD300EQ496F6 205 aaPredicted RBP8.63□□□□□ -1.03
YBX3-216ENST00000544622 FAM106AQ4KMX7 169 aa8.63□□□□□ -1.03
YBX3-216ENST00000544622 PYDC2Q56P42 97 aa8.63□□□□□ -1.03
YBX3-216ENST00000544622 C11orf87Q6NUJ2 197 aa8.63□□□□□ -1.03
YBX3-216ENST00000544622 OR52E5Q8NH55 327 aa8.63□□□□□ -1.03
YBX3-216ENST00000544622 BSCL2Q96G97 398 aaPredicted RBP8.63□□□□□ -1.03
YBX3-216ENST00000544622 SCGB3A2Q96PL1 93 aa8.63□□□□□ -1.03
YBX3-216ENST00000544622 C19orf73Q9NVV2 129 aa8.63□□□□□ -1.03
YBX3-216ENST00000544622 C21orf62Q9NYP8 219 aa8.63□□□□□ -1.03
YBX3-216ENST00000544622 NDUFA13Q9P0J0 144 aa8.63□□□□□ -1.03
YBX3-216ENST00000544622 OR2T8A6NH00 312 aa8.62□□□□□ -1.03
YBX3-216ENST00000544622 ELLP55199 621 aaPredicted RBP8.62□□□□□ -1.03
YBX3-216ENST00000544622 AP3S2P59780 193 aa8.62□□□□□ -1.03
YBX3-216ENST00000544622 ERHP84090 104 aaKnown RBP8.62□□□□□ -1.03
YBX3-216ENST00000544622 BAK1Q16611 211 aa8.62□□□□□ -1.03
YBX3-216ENST00000544622 LCN12Q6JVE5 192 aa8.62□□□□□ -1.03
YBX3-216ENST00000544622 SPSB3Q6PJ21 355 aa8.62□□□□□ -1.03
YBX3-216ENST00000544622 PLET1Q6UQ28 207 aa8.62□□□□□ -1.03
YBX3-216ENST00000544622 SGPP2Q8IWX5 399 aa8.62□□□□□ -1.03
YBX3-216ENST00000544622 IL22RA2Q969J5 263 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms