RNA–Protein interactions for RNA: ENST00000544301.6

VIM-209, Transcript of vimentin, humanhuman

APPRIS P1 TSL 1 (best)

Gene VIM, Length 2,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-209ENST00000544301 GAR1Q9NY12 217 aaKnown RBP14.64□□□□□ -0.07
VIM-209ENST00000544301 SRP14P37108 136 aaKnown RBP14.63□□□□□ -0.07
VIM-209ENST00000544301 DLX6P56179 175 aa14.63□□□□□ -0.07
VIM-209ENST00000544301 DIAPH2-AS1Q14236 149 aa14.63□□□□□ -0.07
VIM-209ENST00000544301 CLEC12BQ2HXU8 276 aa14.63□□□□□ -0.07
VIM-209ENST00000544301 FLYWCH2Q96CP2 140 aaKnown RBP14.63□□□□□ -0.07
VIM-209ENST00000544301 NABP2Q9BQ15 211 aa14.63□□□□□ -0.07
VIM-209ENST00000544301 VKORC1Q9BQB6 163 aa14.63□□□□□ -0.07
VIM-209ENST00000544301 NDUFA4L2Q9NRX3 87 aa14.63□□□□□ -0.07
VIM-209ENST00000544301 AURKAIP1Q9NWT8 199 aaPredicted RBP14.63□□□□□ -0.07
VIM-209ENST00000544301 KAAG1Q9UBP8 84 aa14.63□□□□□ -0.07
VIM-209ENST00000544301 IGKV1OR2-108A0A075B7D4 117 aa14.63□□□□□ -0.07
VIM-209ENST00000544301 SCO2A0A1W2PP80 73 aa14.63□□□□□ -0.07
VIM-209ENST00000544301 S100A2P29034 98 aa14.63□□□□□ -0.07
VIM-209ENST00000544301 CHRNA7P36544 502 aa14.63□□□□□ -0.07
VIM-209ENST00000544301 GAMTQ14353 236 aa14.63□□□□□ -0.07
VIM-209ENST00000544301 FAM71F2Q6NXP2 309 aa14.63□□□□□ -0.07
VIM-209ENST00000544301 ZNF114Q8NC26 417 aa14.63□□□□□ -0.07
VIM-209ENST00000544301 PKDREJQ9NTG1 2253 aa14.62□□□□□ -0.07
VIM-209ENST00000544301 A0A1W2PPQ1 181 aa14.62□□□□□ -0.07
VIM-209ENST00000544301 PPP5D1E7EU14 171 aa14.62□□□□□ -0.07
VIM-209ENST00000544301 GGCTO75223 188 aaKnown RBP14.62□□□□□ -0.07
VIM-209ENST00000544301 CD99P14209 185 aa14.62□□□□□ -0.07
VIM-209ENST00000544301 RPL8P62917 257 aaKnown RBP14.62□□□□□ -0.07
VIM-209ENST00000544301 MLANAQ16655 118 aa14.62□□□□□ -0.07
VIM-209ENST00000544301 OR4P4Q8NGL7 312 aa14.62□□□□□ -0.07
VIM-209ENST00000544301 OR2T10Q8NGZ9 312 aa14.62□□□□□ -0.07
VIM-209ENST00000544301 ST6GALNAC6Q969X2 333 aa14.62□□□□□ -0.07
VIM-209ENST00000544301 TMEM186Q96B77 213 aa14.62□□□□□ -0.07
VIM-209ENST00000544301 GPR61Q9BZJ8 451 aa14.62□□□□□ -0.07
VIM-209ENST00000544301 COMMD5Q9GZQ3 224 aa14.62□□□□□ -0.07
VIM-209ENST00000544301 GSN-AS1Q9NRJ2 163 aa14.62□□□□□ -0.07
VIM-209ENST00000544301 TRBV20OR9-2A0A075B6H5 130 aa14.62□□□□□ -0.07
VIM-209ENST00000544301 PGPEP1LA6NFU8 196 aa14.62□□□□□ -0.07
VIM-209ENST00000544301 FABP1P07148 127 aa14.62□□□□□ -0.07
VIM-209ENST00000544301 APOBEC3AP31941 199 aaPredicted RBP14.62□□□□□ -0.07
VIM-209ENST00000544301 TMEM155Q4W5P6 130 aa14.62□□□□□ -0.07
VIM-209ENST00000544301 FAM78BQ5VT40 261 aa14.62□□□□□ -0.07
VIM-209ENST00000544301 MIR17HGQ75NE6 70 aa14.62□□□□□ -0.07
VIM-209ENST00000544301 PDPNQ86YL7 162 aa14.62□□□□□ -0.07
VIM-209ENST00000544301 OR4C13Q8NGP0 309 aa14.62□□□□□ -0.07
VIM-209ENST00000544301 IGHV1-69-2A0A0G2JMI3 117 aa14.61□□□□□ -0.07
VIM-209ENST00000544301 ACTL6BO94805 426 aa14.61□□□□□ -0.07
VIM-209ENST00000544301 MT-CO2P00403 227 aa14.61□□□□□ -0.07
VIM-209ENST00000544301 C1QTNF9P0C862 333 aa14.61□□□□□ -0.07
VIM-209ENST00000544301 USF1P22415 310 aaPredicted RBP14.61□□□□□ -0.07
VIM-209ENST00000544301 PDZD11Q5EBL8 140 aa14.61□□□□□ -0.07
VIM-209ENST00000544301 TMEM167AQ8TBQ9 72 aa14.61□□□□□ -0.07
VIM-209ENST00000544301 OR51M1Q9H341 326 aa14.61□□□□□ -0.07
VIM-209ENST00000544301 E7EUB6 86 aa14.6□□□□□ -0.07
VIM-209ENST00000544301 OR10J1P30954 320 aa14.6□□□□□ -0.07
VIM-209ENST00000544301 OR4A5Q8NH83 315 aa14.6□□□□□ -0.07
VIM-209ENST00000544301 SLC35E1Q96K37 410 aa14.6□□□□□ -0.07
VIM-209ENST00000544301 MIOXQ9UGB7 285 aa14.6□□□□□ -0.07
VIM-209ENST00000544301 FUT9Q9Y231 359 aa14.6□□□□□ -0.07
VIM-209ENST00000544301 A0A087X0M5 115 aa14.6□□□□□ -0.07
VIM-209ENST00000544301 A0A1B0GX30 115 aa14.6□□□□□ -0.07
VIM-209ENST00000544301 INS-IGF2F8WCM5 200 aa14.6□□□□□ -0.07
VIM-209ENST00000544301 CD3EP07766 207 aa14.6□□□□□ -0.07
VIM-209ENST00000544301 ZNF137PP52743 207 aa14.6□□□□□ -0.07
VIM-209ENST00000544301 FAM3BP58499 235 aaPredicted RBP14.6□□□□□ -0.07
VIM-209ENST00000544301 ERHP84090 104 aaKnown RBP14.6□□□□□ -0.07
VIM-209ENST00000544301 CD69Q07108 199 aa14.6□□□□□ -0.07
VIM-209ENST00000544301 KCNIP4Q6PIL6 250 aa14.6□□□□□ -0.07
VIM-209ENST00000544301 TLN1Q9Y490 2541 aaKnown RBP14.6□□□□□ -0.07
VIM-209ENST00000544301 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP14.59□□□□□ -0.07
VIM-209ENST00000544301 B9A039 149 aa14.59□□□□□ -0.07
VIM-209ENST00000544301 IGLV2-23P01705 113 aa14.59□□□□□ -0.07
VIM-209ENST00000544301 GATA2P23769 480 aaPredicted RBP14.59□□□□□ -0.07
VIM-209ENST00000544301 PYY3Q5JQD4 70 aa14.59□□□□□ -0.07
VIM-209ENST00000544301 OR10D4PQ8NGN7 298 aa14.59□□□□□ -0.07
VIM-209ENST00000544301 OR9G1Q8NH87 305 aa14.59□□□□□ -0.07
VIM-209ENST00000544301 VSTM2AQ8TAG5 236 aa14.59□□□□□ -0.07
VIM-209ENST00000544301 PITPNC1Q9UKF7 332 aa14.59□□□□□ -0.07
VIM-209ENST00000544301 WASHC3Q9Y3C0 194 aa14.59□□□□□ -0.07
VIM-209ENST00000544301 CGB1A6NKQ9 187 aa14.59□□□□□ -0.07
VIM-209ENST00000544301 DLL1O00548 723 aa14.59□□□□□ -0.07
VIM-209ENST00000544301 PLAUP00749 431 aa14.59□□□□□ -0.07
VIM-209ENST00000544301 TYMSP04818 313 aa14.59□□□□□ -0.07
VIM-209ENST00000544301 IGHV1-8P0DP01 117 aa14.59□□□□□ -0.07
VIM-209ENST00000544301 ARFGEF3Q5TH69 2177 aa14.59□□□□□ -0.07
VIM-209ENST00000544301 SFRP2Q96HF1 295 aa14.59□□□□□ -0.07
VIM-209ENST00000544301 CTAG1AP78358 180 aa14.58□□□□□ -0.08
VIM-209ENST00000544301 TGIF2LXQ8IUE1 241 aa14.58□□□□□ -0.08
VIM-209ENST00000544301 C11orf42Q8N5U0 333 aa14.58□□□□□ -0.08
VIM-209ENST00000544301 CACNG8Q8WXS5 425 aa14.58□□□□□ -0.08
VIM-209ENST00000544301 C11orf52Q96A22 123 aa14.58□□□□□ -0.08
VIM-209ENST00000544301 A0A1W2PN81 502 aa14.57□□□□□ -0.08
VIM-209ENST00000544301 AREGP15514 252 aa14.57□□□□□ -0.08
VIM-209ENST00000544301 GPX4P36969 197 aaPredicted RBP14.57□□□□□ -0.08
VIM-209ENST00000544301 PSG5Q15238 335 aa14.57□□□□□ -0.08
VIM-209ENST00000544301 PNKDQ8N490 385 aa14.57□□□□□ -0.08
VIM-209ENST00000544301 OCC1Q8TAD7 63 aa14.57□□□□□ -0.08
VIM-209ENST00000544301 IMMP2LQ96T52 175 aa14.57□□□□□ -0.08
VIM-209ENST00000544301 ZNF430Q9H8G1 570 aaPredicted RBP14.57□□□□□ -0.08
VIM-209ENST00000544301 PTPRQQ9UMZ3 2332 aa14.57□□□□□ -0.08
VIM-209ENST00000544301 OR5G3P0C626 314 aa14.57□□□□□ -0.08
VIM-209ENST00000544301 LCN2P80188 198 aa14.57□□□□□ -0.08
VIM-209ENST00000544301 WT1-ASQ06250 92 aa14.57□□□□□ -0.08
VIM-209ENST00000544301 ACTL10Q5JWF8 245 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms