RNA–Protein interactions for RNA: ENST00000544268.5

CHFR-223, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 5

Gene CHFR, Length 2,412 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-223ENST00000544268 COX11Q9Y6N1 276 aa12.38□□□□□ -0.43
CHFR-223ENST00000544268 M0QZ24 198 aa12.37□□□□□ -0.43
CHFR-223ENST00000544268 KITLGP21583 273 aa12.37□□□□□ -0.43
CHFR-223ENST00000544268 LINC00310P59036 64 aa12.37□□□□□ -0.43
CHFR-223ENST00000544268 FAM201AQ5SY85 155 aa12.37□□□□□ -0.43
CHFR-223ENST00000544268 ZNF709Q8N972 641 aa12.37□□□□□ -0.43
CHFR-223ENST00000544268 GATAD1Q8WUU5 269 aa12.37□□□□□ -0.43
CHFR-223ENST00000544268 IL19Q9UHD0 177 aa12.37□□□□□ -0.43
CHFR-223ENST00000544268 PSG11Q9UQ72 335 aa12.37□□□□□ -0.43
CHFR-223ENST00000544268 GRIFINA4D1Z8 144 aa12.37□□□□□ -0.43
CHFR-223ENST00000544268 THBDP07204 575 aa12.37□□□□□ -0.43
CHFR-223ENST00000544268 SLC25A6P12236 298 aa12.37□□□□□ -0.43
CHFR-223ENST00000544268 CD40P25942 277 aa12.37□□□□□ -0.43
CHFR-223ENST00000544268 UBE2G2P60604 165 aa12.37□□□□□ -0.43
CHFR-223ENST00000544268 RPL19P84098 196 aaKnown RBP12.37□□□□□ -0.43
CHFR-223ENST00000544268 EIF4EBP1Q13541 118 aaPredicted RBP12.37□□□□□ -0.43
CHFR-223ENST00000544268 MORN2Q502X0 79 aa12.37□□□□□ -0.43
CHFR-223ENST00000544268 WFDC8Q8IUA0 241 aa12.37□□□□□ -0.43
CHFR-223ENST00000544268 KCNIP1Q9NZI2 227 aa12.37□□□□□ -0.43
CHFR-223ENST00000544268 DUSP13Q9UII6 198 aa12.37□□□□□ -0.43
CHFR-223ENST00000544268 F6UZH7 168 aa12.36□□□□□ -0.43
CHFR-223ENST00000544268 SUMO1P63165 101 aaKnown RBP12.36□□□□□ -0.43
CHFR-223ENST00000544268 SLC38A11Q08AI6 406 aa12.36□□□□□ -0.43
CHFR-223ENST00000544268 C1orf174Q8IYL3 243 aa12.36□□□□□ -0.43
CHFR-223ENST00000544268 VKORC1L1Q8N0U8 176 aa12.36□□□□□ -0.43
CHFR-223ENST00000544268 RPP25LQ8N5L8 163 aaKnown RBP12.36□□□□□ -0.43
CHFR-223ENST00000544268 OR2Z1Q8NG97 314 aa12.36□□□□□ -0.43
CHFR-223ENST00000544268 WDR61Q9GZS3 305 aaKnown RBP12.36□□□□□ -0.43
CHFR-223ENST00000544268 IGHV2-70DA0A0C4DH43 119 aa12.36□□□□□ -0.43
CHFR-223ENST00000544268 PROP1O75360 226 aa12.36□□□□□ -0.43
CHFR-223ENST00000544268 SERF1AO75920 110 aa12.36□□□□□ -0.43
CHFR-223ENST00000544268 TFF3Q07654 80 aa12.36□□□□□ -0.43
CHFR-223ENST00000544268 SPATA45Q537H7 98 aa12.36□□□□□ -0.43
CHFR-223ENST00000544268 ACSM6Q6P461 480 aa12.36□□□□□ -0.43
CHFR-223ENST00000544268 LRRC29Q8WV35 223 aa12.36□□□□□ -0.43
CHFR-223ENST00000544268 LEAP2Q969E1 77 aa12.36□□□□□ -0.43
CHFR-223ENST00000544268 NEIL1Q96FI4 390 aaPredicted RBP12.36□□□□□ -0.43
CHFR-223ENST00000544268 HSPB7Q9UBY9 170 aa12.36□□□□□ -0.43
CHFR-223ENST00000544268 WNT2P09544 360 aa12.35□□□□□ -0.43
CHFR-223ENST00000544268 IGLC2P0DOY2 106 aa12.35□□□□□ -0.43
CHFR-223ENST00000544268 IGLC3P0DOY3 106 aa12.35□□□□□ -0.43
CHFR-223ENST00000544268 GLRXP35754 106 aa12.35□□□□□ -0.43
CHFR-223ENST00000544268 HNRNPA3P51991 378 aaKnown RBP12.35□□□□□ -0.43
CHFR-223ENST00000544268 HBG1P69891 147 aa12.35□□□□□ -0.43
CHFR-223ENST00000544268 HBG2P69892 147 aa12.35□□□□□ -0.43
CHFR-223ENST00000544268 Q6ZN92 141 aa12.35□□□□□ -0.43
CHFR-223ENST00000544268 TXN2Q99757 166 aa12.35□□□□□ -0.43
CHFR-223ENST00000544268 SLC25A22Q9H936 323 aa12.35□□□□□ -0.43
CHFR-223ENST00000544268 HYPMO75409 117 aa12.35□□□□□ -0.43
CHFR-223ENST00000544268 RBMXL2O75526 392 aaKnown RBP12.35□□□□□ -0.43
CHFR-223ENST00000544268 CRISP2P16562 243 aa12.35□□□□□ -0.43
CHFR-223ENST00000544268 DUX4L9Q6RFH8 374 aaPredicted RBP12.35□□□□□ -0.43
CHFR-223ENST00000544268 Q8N976 141 aa12.35□□□□□ -0.43
CHFR-223ENST00000544268 ZNRF1Q8ND25 227 aa12.35□□□□□ -0.43
CHFR-223ENST00000544268 TAF15Q92804 592 aaKnown RBP eCLIP12.35□□□□□ -0.43
CHFR-223ENST00000544268 CXXC4Q9H2H0 198 aa12.35□□□□□ -0.43
CHFR-223ENST00000544268 OOEPA6NGQ2 149 aa12.34□□□□□ -0.43
CHFR-223ENST00000544268 FAM90A27PA6NNH2 459 aa12.34□□□□□ -0.43
CHFR-223ENST00000544268 P0C879 139 aa12.34□□□□□ -0.43
CHFR-223ENST00000544268 STAG3L3P0CL85 134 aa12.34□□□□□ -0.43
CHFR-223ENST00000544268 ADORA2A-AS1P86434 159 aa12.34□□□□□ -0.43
CHFR-223ENST00000544268 FBLN7Q53RD9 439 aa12.34□□□□□ -0.43
CHFR-223ENST00000544268 OR4C5Q8NGB2 326 aa12.34□□□□□ -0.43
CHFR-223ENST00000544268 SAMD10Q9BYL1 202 aa12.34□□□□□ -0.43
CHFR-223ENST00000544268 DPRXA6NFQ7 191 aa12.33□□□□□ -0.43
CHFR-223ENST00000544268 LRRC30A6NM36 301 aa12.33□□□□□ -0.43
CHFR-223ENST00000544268 DIRC3C9JPN6 131 aa12.33□□□□□ -0.43
CHFR-223ENST00000544268 TMEM14EPQ6UXP3 125 aa12.33□□□□□ -0.43
CHFR-223ENST00000544268 C1orf229Q6ZS94 237 aaPredicted RBP12.33□□□□□ -0.43
CHFR-223ENST00000544268 TCF23Q7RTU1 214 aa12.33□□□□□ -0.43
CHFR-223ENST00000544268 SGMS2Q8NHU3 365 aa12.33□□□□□ -0.43
CHFR-223ENST00000544268 TIMM9Q9Y5J7 89 aa12.33□□□□□ -0.43
CHFR-223ENST00000544268 USP24Q9UPU5 2620 aa12.33□□□□□ -0.44
CHFR-223ENST00000544268 IGKV1D-17A0A075B6S4 117 aa12.33□□□□□ -0.44
CHFR-223ENST00000544268 CTXND1A0A1B0GTU2 59 aa12.33□□□□□ -0.44
CHFR-223ENST00000544268 CDSNQ15517 529 aa12.33□□□□□ -0.44
CHFR-223ENST00000544268 SLC35E4Q6ICL7 350 aa12.33□□□□□ -0.44
CHFR-223ENST00000544268 NINJ1Q92982 152 aa12.33□□□□□ -0.44
CHFR-223ENST00000544268 BET1LQ9NYM9 111 aa12.33□□□□□ -0.44
CHFR-223ENST00000544268 FBXL7Q9UJT9 491 aa12.33□□□□□ -0.44
CHFR-223ENST00000544268 CSMD1Q96PZ7 3565 aa12.33□□□□□ -0.44
CHFR-223ENST00000544268 HCFC1P51610 2035 aa12.32□□□□□ -0.44
CHFR-223ENST00000544268 IGSF10Q6WRI0 2623 aa12.32□□□□□ -0.44
CHFR-223ENST00000544268 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.32□□□□□ -0.44
CHFR-223ENST00000544268 TMPRSS2O15393 492 aa12.32□□□□□ -0.44
CHFR-223ENST00000544268 BSPH1Q075Z2 132 aa12.32□□□□□ -0.44
CHFR-223ENST00000544268 Q0VG73 95 aa12.32□□□□□ -0.44
CHFR-223ENST00000544268 RPL39P5Q59GN2 51 aa12.32□□□□□ -0.44
CHFR-223ENST00000544268 GCSAMLQ5JQS6 135 aa12.32□□□□□ -0.44
CHFR-223ENST00000544268 SIGLECL1Q8N7X8 197 aa12.32□□□□□ -0.44
CHFR-223ENST00000544268 ZNF586Q9NXT0 402 aa12.32□□□□□ -0.44
CHFR-223ENST00000544268 HIVEP3Q5T1R4 2406 aa12.32□□□□□ -0.44
CHFR-223ENST00000544268 PIGBOS1A0A0B4J2F0 54 aa12.32□□□□□ -0.44
CHFR-223ENST00000544268 PMS2P5A8MQ11 134 aa12.32□□□□□ -0.44
CHFR-223ENST00000544268 C15orf65H3BRN8 121 aa12.32□□□□□ -0.44
CHFR-223ENST00000544268 OR9G9P0C7N8 305 aa12.32□□□□□ -0.44
CHFR-223ENST00000544268 ZNF134P52741 427 aa12.32□□□□□ -0.44
CHFR-223ENST00000544268 FFAR4Q5NUL3 377 aa12.32□□□□□ -0.44
CHFR-223ENST00000544268 UNQ5815/PRO19632Q6UWF5 114 aa12.32□□□□□ -0.44
CHFR-223ENST00000544268 BAGE3Q86Y29 109 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms