RNA–Protein interactions for RNA: ENST00000543462.1

VEGFB-204, Transcript of vascular endothelial growth factor B, humanhuman

TSL 2

Gene VEGFB, Length 663 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFB-204ENST00000543462 VAMP1P23763 118 aa7.64□□□□□ -1.19
VEGFB-204ENST00000543462 MYCNOSP40205 109 aa7.64□□□□□ -1.19
VEGFB-204ENST00000543462 TMEM65Q6PI78 240 aa7.64□□□□□ -1.19
VEGFB-204ENST00000543462 MRPL41Q8IXM3 137 aaKnown RBP7.64□□□□□ -1.19
VEGFB-204ENST00000543462 OR4A16Q8NH70 328 aa7.64□□□□□ -1.19
VEGFB-204ENST00000543462 MITD1Q8WV92 249 aa7.64□□□□□ -1.19
VEGFB-204ENST00000543462 RRNAD1Q96FB5 475 aaKnown RBP7.64□□□□□ -1.19
VEGFB-204ENST00000543462 ZNF414Q96IQ9 312 aa7.64□□□□□ -1.19
VEGFB-204ENST00000543462 USMG5Q96IX5 58 aa7.64□□□□□ -1.19
VEGFB-204ENST00000543462 CCDC140Q96MF4 163 aa7.64□□□□□ -1.19
VEGFB-204ENST00000543462 DUX3Q96PT4 197 aa7.64□□□□□ -1.19
VEGFB-204ENST00000543462 HSPB7Q9UBY9 170 aa7.64□□□□□ -1.19
VEGFB-204ENST00000543462 F11RQ9Y624 299 aaKnown RBP7.64□□□□□ -1.19
VEGFB-204ENST00000543462 IGHV4OR15-8A0A075B7B6 117 aa7.63□□□□□ -1.19
VEGFB-204ENST00000543462 A0A087WW49 117 aa7.63□□□□□ -1.19
VEGFB-204ENST00000543462 PIGBOS1A0A0B4J2F0 54 aa7.63□□□□□ -1.19
VEGFB-204ENST00000543462 NUDT19A8MXV4 375 aa7.63□□□□□ -1.19
VEGFB-204ENST00000543462 F8W735 103 aaPredicted RBP7.63□□□□□ -1.19
VEGFB-204ENST00000543462 OR2J3O76001 311 aa7.63□□□□□ -1.19
VEGFB-204ENST00000543462 NDUFB8O95169 186 aa7.63□□□□□ -1.19
VEGFB-204ENST00000543462 TRBV12-3P01733 135 aa7.63□□□□□ -1.19
VEGFB-204ENST00000543462 SULT1A3P0DMM9 295 aa7.63□□□□□ -1.19
VEGFB-204ENST00000543462 SULT1A4P0DMN0 295 aa7.63□□□□□ -1.19
VEGFB-204ENST00000543462 HIST1H1BP16401 226 aaKnown RBP7.63□□□□□ -1.19
VEGFB-204ENST00000543462 SPCS3P61009 180 aa7.63□□□□□ -1.19
VEGFB-204ENST00000543462 SMCO1Q147U7 214 aa7.63□□□□□ -1.19
VEGFB-204ENST00000543462 C11orf87Q6NUJ2 197 aa7.63□□□□□ -1.19
VEGFB-204ENST00000543462 MZT2BQ6NZ67 158 aa7.63□□□□□ -1.19
VEGFB-204ENST00000543462 NRARPQ7Z6K4 114 aa7.63□□□□□ -1.19
VEGFB-204ENST00000543462 OR52B4Q8NGK2 314 aa7.63□□□□□ -1.19
VEGFB-204ENST00000543462 OR1P1Q8NH06 330 aa7.63□□□□□ -1.19
VEGFB-204ENST00000543462 TMEM170AQ8WVE7 144 aa7.63□□□□□ -1.19
VEGFB-204ENST00000543462 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.63□□□□□ -1.19
VEGFB-204ENST00000543462 TMED3Q9Y3Q3 217 aa7.63□□□□□ -1.19
VEGFB-204ENST00000543462 TRAV6A0A075B6T7 132 aa7.62□□□□□ -1.19
VEGFB-204ENST00000543462 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.62□□□□□ -1.19
VEGFB-204ENST00000543462 A0A0G2JLM5 398 aa7.62□□□□□ -1.19
VEGFB-204ENST00000543462 A0A1B0GU03 582 aa7.62□□□□□ -1.19
VEGFB-204ENST00000543462 FAM240BA0A1B0GVZ2 78 aa7.62□□□□□ -1.19
VEGFB-204ENST00000543462 MFSD2BA6NFX1 497 aa7.62□□□□□ -1.19
VEGFB-204ENST00000543462 K7EIM0 57 aa7.62□□□□□ -1.19
VEGFB-204ENST00000543462 IGHV3-11P01762 117 aa7.62□□□□□ -1.19
VEGFB-204ENST00000543462 H2AFB2P0C5Z0 115 aa7.62□□□□□ -1.19
VEGFB-204ENST00000543462 RNASE2P10153 161 aaKnown RBP7.62□□□□□ -1.19
VEGFB-204ENST00000543462 TNFRSF9Q07011 255 aa7.62□□□□□ -1.19
VEGFB-204ENST00000543462 ZNF616Q08AN1 781 aa7.62□□□□□ -1.19
VEGFB-204ENST00000543462 EXOSC2Q13868 293 aaKnown RBP7.62□□□□□ -1.19
VEGFB-204ENST00000543462 C15orf32Q32M92 178 aa7.62□□□□□ -1.19
VEGFB-204ENST00000543462 KPRPQ5T749 579 aaPredicted RBP7.62□□□□□ -1.19
VEGFB-204ENST00000543462 SAMD5Q5TGI4 173 aa7.62□□□□□ -1.19
VEGFB-204ENST00000543462 OR11H1Q8NG94 326 aa7.62□□□□□ -1.19
VEGFB-204ENST00000543462 ZNF502Q8TBZ5 544 aa7.62□□□□□ -1.19
VEGFB-204ENST00000543462 OR5B12Q96R08 314 aa7.62□□□□□ -1.19
VEGFB-204ENST00000543462 MARVELD1Q9BSK0 173 aa7.62□□□□□ -1.19
VEGFB-204ENST00000543462 PLEKHA3Q9HB20 300 aa7.62□□□□□ -1.19
VEGFB-204ENST00000543462 C13orf42A0A1B0GVH6 325 aa7.61□□□□□ -1.19
VEGFB-204ENST00000543462 MPTX1A8MV57 137 aa7.61□□□□□ -1.19
VEGFB-204ENST00000543462 I3L2K1 104 aa7.61□□□□□ -1.19
VEGFB-204ENST00000543462 BMPR1BO00238 502 aa7.61□□□□□ -1.19
VEGFB-204ENST00000543462 ADAP1O75689 374 aa7.61□□□□□ -1.19
VEGFB-204ENST00000543462 DHFRP00374 187 aa7.61□□□□□ -1.19
VEGFB-204ENST00000543462 PF4P02776 101 aa7.61□□□□□ -1.19
VEGFB-204ENST00000543462 HSPB1P04792 205 aaKnown RBP7.61□□□□□ -1.19
VEGFB-204ENST00000543462 IL5P05113 134 aa7.61□□□□□ -1.19
VEGFB-204ENST00000543462 OR8U8P0C7N1 319 aa7.61□□□□□ -1.19
VEGFB-204ENST00000543462 SPINK9Q5DT21 86 aa7.61□□□□□ -1.19
VEGFB-204ENST00000543462 GGNBP1Q5YKI7 109 aa7.61□□□□□ -1.19
VEGFB-204ENST00000543462 OR1N2Q8NGR9 330 aa7.61□□□□□ -1.19
VEGFB-204ENST00000543462 RNASE11Q8TAA1 199 aaKnown RBP7.61□□□□□ -1.19
VEGFB-204ENST00000543462 VN1R17PQ8TDU5 208 aa7.61□□□□□ -1.19
VEGFB-204ENST00000543462 ZNF431Q8TF32 576 aaPredicted RBP7.61□□□□□ -1.19
VEGFB-204ENST00000543462 ATP6V0BQ99437 205 aa7.61□□□□□ -1.19
VEGFB-204ENST00000543462 SEC22CQ9BRL7 303 aa7.61□□□□□ -1.19
VEGFB-204ENST00000543462 HINT2Q9BX68 163 aa7.61□□□□□ -1.19
VEGFB-204ENST00000543462 ZNF355PQ9NSJ1 428 aa7.61□□□□□ -1.19
VEGFB-204ENST00000543462 FBXL7Q9UJT9 491 aa7.61□□□□□ -1.19
VEGFB-204ENST00000543462 FAM90A26D6RGX4 464 aa7.6□□□□□ -1.19
VEGFB-204ENST00000543462 LINC01619G3V211 115 aa7.6□□□□□ -1.19
VEGFB-204ENST00000543462 SPNP16150 400 aa7.6□□□□□ -1.19
VEGFB-204ENST00000543462 HOXD3P31249 432 aaPredicted RBP7.6□□□□□ -1.19
VEGFB-204ENST00000543462 FCGR2BP31994 310 aaPredicted RBP7.6□□□□□ -1.19
VEGFB-204ENST00000543462 SLURP1P55000 103 aa7.6□□□□□ -1.19
VEGFB-204ENST00000543462 ATP5G2Q06055 141 aa7.6□□□□□ -1.19
VEGFB-204ENST00000543462 C4orf46Q504U0 113 aa7.6□□□□□ -1.19
VEGFB-204ENST00000543462 FAM209BQ5JX69 171 aa7.6□□□□□ -1.19
VEGFB-204ENST00000543462 OR4D5Q8NGN0 318 aa7.6□□□□□ -1.19
VEGFB-204ENST00000543462 OR1L6Q8NGR2 347 aa7.6□□□□□ -1.19
VEGFB-204ENST00000543462 COQ8AQ8NI60 647 aa7.6□□□□□ -1.19
VEGFB-204ENST00000543462 ENKURQ8TC29 256 aa7.6□□□□□ -1.19
VEGFB-204ENST00000543462 CACFD1Q9UGQ2 172 aa7.6□□□□□ -1.19
VEGFB-204ENST00000543462 PTTG1O95997 202 aa7.59□□□□□ -1.19
VEGFB-204ENST00000543462 IFNA17P01571 189 aa7.59□□□□□ -1.19
VEGFB-204ENST00000543462 HOXB5P09067 269 aa7.59□□□□□ -1.19
VEGFB-204ENST00000543462 RAB25P57735 213 aa7.59□□□□□ -1.19
VEGFB-204ENST00000543462 DEFA1P59665 94 aa7.59□□□□□ -1.19
VEGFB-204ENST00000543462 DEFA3P59666 94 aa7.59□□□□□ -1.19
VEGFB-204ENST00000543462 KLF5Q13887 457 aaPredicted RBP7.59□□□□□ -1.19
VEGFB-204ENST00000543462 BEAN1Q3B7T3 259 aa7.59□□□□□ -1.19
VEGFB-204ENST00000543462 C2orf83Q53S99 150 aa7.59□□□□□ -1.19
VEGFB-204ENST00000543462 SCARB1Q8WTV0 552 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms