RNA–Protein interactions for RNA: ENST00000542685.5

XRCC4-206, Transcript of X-ray repair cross complementing 4, humanhuman

TSL 1 (best)

Gene XRCC4, Length 1,243 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-206ENST00000542685 GNB4Q9HAV0 340 aa4.77□□□□□ -1.65
XRCC4-206ENST00000542685 KCNIP2Q9NS61 270 aa4.77□□□□□ -1.65
XRCC4-206ENST00000542685 RPRMQ9NS64 109 aa4.77□□□□□ -1.65
XRCC4-206ENST00000542685 KCNS2Q9ULS6 477 aa4.77□□□□□ -1.65
XRCC4-206ENST00000542685 IER3IP1Q9Y5U9 82 aa4.77□□□□□ -1.65
XRCC4-206ENST00000542685 HEBP2Q9Y5Z4 205 aa4.77□□□□□ -1.65
XRCC4-206ENST00000542685 TRAV27A0A087WT01 109 aa4.76□□□□□ -1.65
XRCC4-206ENST00000542685 FEZF1A0PJY2 475 aa4.76□□□□□ -1.65
XRCC4-206ENST00000542685 C9JCJ5 164 aa4.76□□□□□ -1.65
XRCC4-206ENST00000542685 C15orf65H3BRN8 121 aa4.76□□□□□ -1.65
XRCC4-206ENST00000542685 SDCBPO00560 298 aaPredicted RBP4.76□□□□□ -1.65
XRCC4-206ENST00000542685 SH2D1BO14796 132 aa4.76□□□□□ -1.65
XRCC4-206ENST00000542685 SCGB2A1O75556 95 aa4.76□□□□□ -1.65
XRCC4-206ENST00000542685 TTRP02766 147 aa4.76□□□□□ -1.65
XRCC4-206ENST00000542685 GYPBP06028 91 aa4.76□□□□□ -1.65
XRCC4-206ENST00000542685 SPINK8P0C7L1 97 aa4.76□□□□□ -1.65
XRCC4-206ENST00000542685 CPMP14384 443 aa4.76□□□□□ -1.65
XRCC4-206ENST00000542685 VDAC1P21796 283 aa4.76□□□□□ -1.65
XRCC4-206ENST00000542685 EVI2AP22794 236 aa4.76□□□□□ -1.65
XRCC4-206ENST00000542685 PTGDSP41222 190 aa4.76□□□□□ -1.65
XRCC4-206ENST00000542685 DYNLT3P51808 116 aa4.76□□□□□ -1.65
XRCC4-206ENST00000542685 ZNF133P52736 654 aaPredicted RBP4.76□□□□□ -1.65
XRCC4-206ENST00000542685 SLC35B1P78383 322 aa4.76□□□□□ -1.65
XRCC4-206ENST00000542685 ZNF90Q03938 601 aa4.76□□□□□ -1.65
XRCC4-206ENST00000542685 ARL16Q0P5N6 197 aa4.76□□□□□ -1.65
XRCC4-206ENST00000542685 PSG7Q13046 419 aa4.76□□□□□ -1.65
XRCC4-206ENST00000542685 RPEL1Q2QD12 228 aa4.76□□□□□ -1.65
XRCC4-206ENST00000542685 ABCA11PQ4W5N1 156 aa4.76□□□□□ -1.65
XRCC4-206ENST00000542685 PRR30Q53SZ7 412 aaPredicted RBP4.76□□□□□ -1.65
XRCC4-206ENST00000542685 FAM78AQ5JUQ0 283 aa4.76□□□□□ -1.65
XRCC4-206ENST00000542685 TMEM78Q5T7P6 136 aa4.76□□□□□ -1.65
XRCC4-206ENST00000542685 FAM69BQ5VUD6 431 aa4.76□□□□□ -1.65
XRCC4-206ENST00000542685 TMEM215Q68D42 235 aa4.76□□□□□ -1.65
XRCC4-206ENST00000542685 C9orf139Q6ZV77 190 aa4.76□□□□□ -1.65
XRCC4-206ENST00000542685 CPEB2Q7Z5Q1 589 aaKnown RBP4.76□□□□□ -1.65
XRCC4-206ENST00000542685 TMEM251Q8N6I4 163 aa4.76□□□□□ -1.65
XRCC4-206ENST00000542685 ZNF436-AS1Q8NC38 126 aaPredicted RBP4.76□□□□□ -1.65
XRCC4-206ENST00000542685 ZNF439Q8NDP4 499 aa4.76□□□□□ -1.65
XRCC4-206ENST00000542685 OR6K6Q8NGW6 343 aa4.76□□□□□ -1.65
XRCC4-206ENST00000542685 OTOSQ8NHW6 89 aa4.76□□□□□ -1.65
XRCC4-206ENST00000542685 TSKUQ8WUA8 353 aa4.76□□□□□ -1.65
XRCC4-206ENST00000542685 RTN4IP1Q8WWV3 396 aaPredicted RBP4.76□□□□□ -1.65
XRCC4-206ENST00000542685 LHX4Q969G2 390 aa4.76□□□□□ -1.65
XRCC4-206ENST00000542685 DNAJC30Q96LL9 226 aa4.76□□□□□ -1.65
XRCC4-206ENST00000542685 RCHY1Q96PM5 261 aa4.76□□□□□ -1.65
XRCC4-206ENST00000542685 TNFRSF13CQ96RJ3 184 aa4.76□□□□□ -1.65
XRCC4-206ENST00000542685 VGLL1Q99990 258 aa4.76□□□□□ -1.65
XRCC4-206ENST00000542685 RTN4RQ9BZR6 473 aa4.76□□□□□ -1.65
XRCC4-206ENST00000542685 VN1R1Q9GZP7 353 aa4.76□□□□□ -1.65
XRCC4-206ENST00000542685 IFI27L2Q9H2X8 130 aa4.76□□□□□ -1.65
XRCC4-206ENST00000542685 ELOVL3Q9HB03 270 aa4.76□□□□□ -1.65
XRCC4-206ENST00000542685 HES4Q9HCC6 221 aa4.76□□□□□ -1.65
XRCC4-206ENST00000542685 SLC39A9Q9NUM3 307 aa4.76□□□□□ -1.65
XRCC4-206ENST00000542685 TAS2R4Q9NYW5 299 aa4.76□□□□□ -1.65
XRCC4-206ENST00000542685 THAP10Q9P2Z0 257 aaPredicted RBP4.76□□□□□ -1.65
XRCC4-206ENST00000542685 ABT1Q9ULW3 272 aaKnown RBP4.76□□□□□ -1.65
XRCC4-206ENST00000542685 ARL2-SNX15V9GYD0 113 aa4.76□□□□□ -1.65
XRCC4-206ENST00000542685 A0A087WX48 190 aa4.75□□□□□ -1.65
XRCC4-206ENST00000542685 KBTBD11-OT1A0A1B0GTJ5 212 aa4.75□□□□□ -1.65
XRCC4-206ENST00000542685 A0A1B0GUS0 222 aa4.75□□□□□ -1.65
XRCC4-206ENST00000542685 SPAARA0A1B0GVQ0 90 aa4.75□□□□□ -1.65
XRCC4-206ENST00000542685 OR4C46A6NHA9 309 aa4.75□□□□□ -1.65
XRCC4-206ENST00000542685 FABP5P3A8MUU1 101 aa4.75□□□□□ -1.65
XRCC4-206ENST00000542685 SNURFLB1AK76 121 aa4.75□□□□□ -1.65
XRCC4-206ENST00000542685 M0R2Z0 102 aa4.75□□□□□ -1.65
XRCC4-206ENST00000542685 XRCC2O43543 280 aa4.75□□□□□ -1.65
XRCC4-206ENST00000542685 TNFSF14O43557 240 aa4.75□□□□□ -1.65
XRCC4-206ENST00000542685 ANGPTL7O43827 346 aa4.75□□□□□ -1.65
XRCC4-206ENST00000542685 HSBP1O75506 76 aa4.75□□□□□ -1.65
XRCC4-206ENST00000542685 FCN3O75636 299 aa4.75□□□□□ -1.65
XRCC4-206ENST00000542685 RENP00797 406 aa4.75□□□□□ -1.65
XRCC4-206ENST00000542685 TIMP1P01033 207 aa4.75□□□□□ -1.65
XRCC4-206ENST00000542685 IGHMP01871 453 aa4.75□□□□□ -1.65
XRCC4-206ENST00000542685 CRYGBP07316 175 aa4.75□□□□□ -1.65
XRCC4-206ENST00000542685 CT45A10P0DMU9 189 aa4.75□□□□□ -1.65
XRCC4-206ENST00000542685 SRD5A1P18405 259 aa4.75□□□□□ -1.65
XRCC4-206ENST00000542685 FASLGP48023 281 aa4.75□□□□□ -1.65
XRCC4-206ENST00000542685 FUT6P51993 359 aa4.75□□□□□ -1.65
XRCC4-206ENST00000542685 HILS1P60008 231 aa4.75□□□□□ -1.65
XRCC4-206ENST00000542685 FUT7Q11130 342 aa4.75□□□□□ -1.65
XRCC4-206ENST00000542685 MFAP5Q13361 173 aa4.75□□□□□ -1.65
XRCC4-206ENST00000542685 UNC119Q13432 240 aa4.75□□□□□ -1.65
XRCC4-206ENST00000542685 RNPS1Q15287 305 aaKnown RBP4.75□□□□□ -1.65
XRCC4-206ENST00000542685 MLF2Q15773 248 aaPredicted RBP4.75□□□□□ -1.65
XRCC4-206ENST00000542685 ADAMTSL5Q6ZMM2 481 aa4.75□□□□□ -1.65
XRCC4-206ENST00000542685 VN1R4Q7Z5H5 301 aa4.75□□□□□ -1.65
XRCC4-206ENST00000542685 TMEM25Q86YD3 366 aa4.75□□□□□ -1.65
XRCC4-206ENST00000542685 SFTPA2Q8IWL1 248 aa4.75□□□□□ -1.65
XRCC4-206ENST00000542685 ZADH2Q8N4Q0 377 aa4.75□□□□□ -1.65
XRCC4-206ENST00000542685 ZNF645Q8N7E2 425 aa4.75□□□□□ -1.65
XRCC4-206ENST00000542685 OR9G1Q8NH87 305 aa4.75□□□□□ -1.65
XRCC4-206ENST00000542685 APOBEC3DQ96AK3 386 aaPredicted RBP4.75□□□□□ -1.65
XRCC4-206ENST00000542685 CHCHD1Q96BP2 118 aaKnown RBP4.75□□□□□ -1.65
XRCC4-206ENST00000542685 NMNAT3Q96T66 252 aa4.75□□□□□ -1.65
XRCC4-206ENST00000542685 NRTNQ99748 197 aa4.75□□□□□ -1.65
XRCC4-206ENST00000542685 FAM103A1Q9BTL3 118 aaKnown RBP4.75□□□□□ -1.65
XRCC4-206ENST00000542685 APOOQ9BUR5 198 aa4.75□□□□□ -1.65
XRCC4-206ENST00000542685 TTTY10Q9BZA0 68 aa4.75□□□□□ -1.65
XRCC4-206ENST00000542685 FNDC4Q9H6D8 234 aaPredicted RBP4.75□□□□□ -1.65
XRCC4-206ENST00000542685 RAB9BQ9NP90 201 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms