RNA–Protein interactions for RNA: ENST00000542002.5

YBX3-212, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-212ENST00000542002 TMEM56Q96MV1 263 aa7.42□□□□□ -1.22
YBX3-212ENST00000542002 PRR25Q96S07 402 aa7.42□□□□□ -1.22
YBX3-212ENST00000542002 GPR61Q9BZJ8 451 aa7.42□□□□□ -1.22
YBX3-212ENST00000542002 ZC4H2Q9NQZ6 224 aa7.42□□□□□ -1.22
YBX3-212ENST00000542002 FKBP11Q9NYL4 201 aa7.42□□□□□ -1.22
YBX3-212ENST00000542002 SCP2D1Q9UJQ7 156 aa7.42□□□□□ -1.22
YBX3-212ENST00000542002 C14orf166Q9Y224 244 aaKnown RBP7.42□□□□□ -1.22
YBX3-212ENST00000542002 TMEM56-RWDD3S4R434 201 aa7.42□□□□□ -1.22
YBX3-212ENST00000542002 F8W735 103 aaPredicted RBP7.41□□□□□ -1.22
YBX3-212ENST00000542002 ST8SIA3O43173 380 aa7.41□□□□□ -1.22
YBX3-212ENST00000542002 SPNP16150 400 aa7.41□□□□□ -1.22
YBX3-212ENST00000542002 AKR1C4P17516 323 aa7.41□□□□□ -1.22
YBX3-212ENST00000542002 ZP3P21754 424 aa7.41□□□□□ -1.22
YBX3-212ENST00000542002 INSL3P51460 131 aa7.41□□□□□ -1.22
YBX3-212ENST00000542002 TMEM187Q14656 261 aa7.41□□□□□ -1.22
YBX3-212ENST00000542002 DEFB121Q5J5C9 76 aa7.41□□□□□ -1.22
YBX3-212ENST00000542002 SPANXN2Q5MJ10 180 aa7.41□□□□□ -1.22
YBX3-212ENST00000542002 SLC25A24Q6NUK1 477 aa7.41□□□□□ -1.22
YBX3-212ENST00000542002 OR2C3Q8N628 320 aa7.41□□□□□ -1.22
YBX3-212ENST00000542002 OR9G4Q8NGQ1 327 aa7.41□□□□□ -1.22
YBX3-212ENST00000542002 ZNF502Q8TBZ5 544 aa7.41□□□□□ -1.22
YBX3-212ENST00000542002 LSM10Q969L4 123 aaKnown RBP7.41□□□□□ -1.22
YBX3-212ENST00000542002 GPR146Q96CH1 333 aa7.41□□□□□ -1.22
YBX3-212ENST00000542002 ZNF414Q96IQ9 312 aa7.41□□□□□ -1.22
YBX3-212ENST00000542002 TSC22D3Q99576 134 aa7.41□□□□□ -1.22
YBX3-212ENST00000542002 LSM4Q9Y4Z0 139 aaKnown RBP7.41□□□□□ -1.22
YBX3-212ENST00000542002 F11RQ9Y624 299 aaKnown RBP7.41□□□□□ -1.22
YBX3-212ENST00000542002 TGP01266 2768 aa7.41□□□□□ -1.22
YBX3-212ENST00000542002 K7EIM0 57 aa7.4□□□□□ -1.22
YBX3-212ENST00000542002 B3GALNT1O75752 331 aa7.4□□□□□ -1.22
YBX3-212ENST00000542002 DHFRP00374 187 aa7.4□□□□□ -1.22
YBX3-212ENST00000542002 IGLV1-51P01701 117 aa7.4□□□□□ -1.22
YBX3-212ENST00000542002 HIST1H1BP16401 226 aaKnown RBP7.4□□□□□ -1.22
YBX3-212ENST00000542002 MECP2P51608 486 aaKnown RBP7.4□□□□□ -1.22
YBX3-212ENST00000542002 CCR6P51684 374 aa7.4□□□□□ -1.22
YBX3-212ENST00000542002 PRCDQ00LT1 54 aa7.4□□□□□ -1.22
YBX3-212ENST00000542002 RPEL1Q2QD12 228 aa7.4□□□□□ -1.22
YBX3-212ENST00000542002 TMEM268Q5VZI3 342 aa7.4□□□□□ -1.22
YBX3-212ENST00000542002 C11orf87Q6NUJ2 197 aa7.4□□□□□ -1.22
YBX3-212ENST00000542002 HSD17B13Q7Z5P4 300 aaPredicted RBP7.4□□□□□ -1.22
YBX3-212ENST00000542002 SCARB1Q8WTV0 552 aa7.4□□□□□ -1.22
YBX3-212ENST00000542002 EEF1AKMT3Q96AZ1 226 aa7.4□□□□□ -1.22
YBX3-212ENST00000542002 GALNT14Q96FL9 552 aa7.4□□□□□ -1.22
YBX3-212ENST00000542002 ZNF256Q9Y2P7 627 aaPredicted RBP7.4□□□□□ -1.22
YBX3-212ENST00000542002 TRBV7-1A0A0A6YYK4 115 aa7.39□□□□□ -1.23
YBX3-212ENST00000542002 IGHV3-35A0A0C4DH35 117 aa7.39□□□□□ -1.23
YBX3-212ENST00000542002 LINC00854A0A1B0GVQ3 168 aa7.39□□□□□ -1.23
YBX3-212ENST00000542002 IZUMO1RA6ND01 250 aa7.39□□□□□ -1.23
YBX3-212ENST00000542002 I3L2K1 104 aa7.39□□□□□ -1.23
YBX3-212ENST00000542002 GGCTO75223 188 aaKnown RBP7.39□□□□□ -1.23
YBX3-212ENST00000542002 IGHV3-48P01763 117 aa7.39□□□□□ -1.23
YBX3-212ENST00000542002 BTCP35070 178 aa7.39□□□□□ -1.23
YBX3-212ENST00000542002 ARL3P36405 182 aa7.39□□□□□ -1.23
YBX3-212ENST00000542002 AKR1C2P52895 323 aa7.39□□□□□ -1.23
YBX3-212ENST00000542002 AP3S2P59780 193 aa7.39□□□□□ -1.23
YBX3-212ENST00000542002 DHODHQ02127 395 aa7.39□□□□□ -1.23
YBX3-212ENST00000542002 MLANAQ16655 118 aa7.39□□□□□ -1.23
YBX3-212ENST00000542002 CNPY1Q3B7I2 92 aa7.39□□□□□ -1.23
YBX3-212ENST00000542002 AARDQ4LEZ3 155 aa7.39□□□□□ -1.23
YBX3-212ENST00000542002 ZNF57Q68EA5 555 aaPredicted RBP7.39□□□□□ -1.23
YBX3-212ENST00000542002 THOC7Q6I9Y2 204 aaKnown RBP7.39□□□□□ -1.23
YBX3-212ENST00000542002 UNQ9165/PRO28630Q6UXU0 137 aa7.39□□□□□ -1.23
YBX3-212ENST00000542002 LYZL2Q7Z4W2 148 aa7.39□□□□□ -1.23
YBX3-212ENST00000542002 GPHB5Q86YW7 130 aa7.39□□□□□ -1.23
YBX3-212ENST00000542002 SGPP2Q8IWX5 399 aa7.39□□□□□ -1.23
YBX3-212ENST00000542002 OR1P1Q8NH06 330 aa7.39□□□□□ -1.23
YBX3-212ENST00000542002 VN1R17PQ8TDU5 208 aa7.39□□□□□ -1.23
YBX3-212ENST00000542002 RBPMSQ93062 196 aaKnown RBP7.39□□□□□ -1.23
YBX3-212ENST00000542002 CXorf58Q96LI9 332 aa7.39□□□□□ -1.23
YBX3-212ENST00000542002 SCGB3A2Q96PL1 93 aa7.39□□□□□ -1.23
YBX3-212ENST00000542002 OR4C12Q96R67 309 aa7.39□□□□□ -1.23
YBX3-212ENST00000542002 SELENOKQ9Y6D0 94 aa7.39□□□□□ -1.23
YBX3-212ENST00000542002 OR2T8A6NH00 312 aa7.38□□□□□ -1.23
YBX3-212ENST00000542002 INS-IGF2F8WCM5 200 aa7.38□□□□□ -1.23
YBX3-212ENST00000542002 PLA2G10O15496 165 aa7.38□□□□□ -1.23
YBX3-212ENST00000542002 IFNA17P01571 189 aa7.38□□□□□ -1.23
YBX3-212ENST00000542002 IL7P13232 177 aa7.38□□□□□ -1.23
YBX3-212ENST00000542002 GPR183P32249 361 aa7.38□□□□□ -1.23
YBX3-212ENST00000542002 ADMP35318 185 aa7.38□□□□□ -1.23
YBX3-212ENST00000542002 ANKRD55Q3KP44 614 aa7.38□□□□□ -1.23
YBX3-212ENST00000542002 PVRIGQ6DKI7 326 aa7.38□□□□□ -1.23
YBX3-212ENST00000542002 TMED4Q7Z7H5 227 aa7.38□□□□□ -1.23
YBX3-212ENST00000542002 SLC35G3Q8N808 338 aa7.38□□□□□ -1.23
YBX3-212ENST00000542002 ZNF114Q8NC26 417 aa7.38□□□□□ -1.23
YBX3-212ENST00000542002 RRNAD1Q96FB5 475 aaKnown RBP7.38□□□□□ -1.23
YBX3-212ENST00000542002 CHRDL1Q9BU40 450 aa7.38□□□□□ -1.23
YBX3-212ENST00000542002 ELOVL1Q9BW60 279 aa7.38□□□□□ -1.23
YBX3-212ENST00000542002 CACNG5Q9UF02 275 aa7.38□□□□□ -1.23
YBX3-212ENST00000542002 FLVCR2Q9UPI3 526 aa7.38□□□□□ -1.23
YBX3-212ENST00000542002 KCNIP3Q9Y2W7 256 aa7.38□□□□□ -1.23
YBX3-212ENST00000542002 C2orf70A6NJV1 201 aa7.37□□□□□ -1.23
YBX3-212ENST00000542002 LGALS9O00182 355 aa7.37□□□□□ -1.23
YBX3-212ENST00000542002 ATG12O94817 140 aa7.37□□□□□ -1.23
YBX3-212ENST00000542002 NXPH3O95157 252 aa7.37□□□□□ -1.23
YBX3-212ENST00000542002 CTSGP08311 255 aa7.37□□□□□ -1.23
YBX3-212ENST00000542002 RNASE2P10153 161 aaKnown RBP7.37□□□□□ -1.23
YBX3-212ENST00000542002 FOLR2P14207 255 aa7.37□□□□□ -1.23
YBX3-212ENST00000542002 GP9P14770 177 aa7.37□□□□□ -1.23
YBX3-212ENST00000542002 FAUP35544 74 aaKnown RBP7.37□□□□□ -1.23
YBX3-212ENST00000542002 PPP1R1AQ13522 171 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms