RNA–Protein interactions for RNA: ENST00000541713.5

PTPN1-202, Transcript of protein tyrosine phosphatase, non-receptor type 1, humanhuman

TSL 2 BASIC

Gene PTPN1, Length 3,469 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1-202ENST00000541713 ADMP35318 185 aa11.1□□□□□ -0.63
PTPN1-202ENST00000541713 HSPE1P61604 102 aaKnown RBP11.1□□□□□ -0.63
PTPN1-202ENST00000541713 TMEM183AQ8IXX5 376 aa11.1□□□□□ -0.63
PTPN1-202ENST00000541713 Q8N7P7 452 aa11.1□□□□□ -0.63
PTPN1-202ENST00000541713 C14orf144Q96I85 54 aa11.1□□□□□ -0.63
PTPN1-202ENST00000541713 CTDSP1Q9GZU7 261 aa11.1□□□□□ -0.63
PTPN1-202ENST00000541713 CBLN4Q9NTU7 201 aa11.1□□□□□ -0.63
PTPN1-202ENST00000541713 JPT1Q9UK76 154 aa11.1□□□□□ -0.63
PTPN1-202ENST00000541713 G0S2P27469 103 aa11.09□□□□□ -0.63
PTPN1-202ENST00000541713 OPRK1P41145 380 aa11.09□□□□□ -0.63
PTPN1-202ENST00000541713 VDAC2P45880 294 aaPredicted RBP11.09□□□□□ -0.63
PTPN1-202ENST00000541713 RPP30P78346 268 aaKnown RBP11.09□□□□□ -0.63
PTPN1-202ENST00000541713 RAB31Q13636 194 aa11.09□□□□□ -0.63
PTPN1-202ENST00000541713 NABP2Q9BQ15 211 aa11.09□□□□□ -0.63
PTPN1-202ENST00000541713 IGKV1OR2-108A0A075B7D4 117 aa11.09□□□□□ -0.63
PTPN1-202ENST00000541713 MOSP00540 346 aa11.09□□□□□ -0.63
PTPN1-202ENST00000541713 SAA1P0DJI8 122 aaPredicted RBP11.09□□□□□ -0.63
PTPN1-202ENST00000541713 CD40P25942 277 aa11.09□□□□□ -0.63
PTPN1-202ENST00000541713 CNN1P51911 297 aaKnown RBP11.09□□□□□ -0.63
PTPN1-202ENST00000541713 HTD2P86397 168 aa11.09□□□□□ -0.63
PTPN1-202ENST00000541713 ZNF664Q8N3J9 261 aa11.09□□□□□ -0.63
PTPN1-202ENST00000541713 ABHD17AQ96GS6 310 aa11.09□□□□□ -0.63
PTPN1-202ENST00000541713 LOXL4Q96JB6 756 aa11.09□□□□□ -0.63
PTPN1-202ENST00000541713 DYNLRB1Q9NP97 96 aa11.09□□□□□ -0.63
PTPN1-202ENST00000541713 TPSG1Q9NRR2 321 aa11.09□□□□□ -0.63
PTPN1-202ENST00000541713 SLC25A10Q9UBX3 287 aaPredicted RBP11.09□□□□□ -0.63
PTPN1-202ENST00000541713 SLC25A17O43808 307 aa11.08□□□□□ -0.64
PTPN1-202ENST00000541713 COX7A1P24310 79 aa11.08□□□□□ -0.64
PTPN1-202ENST00000541713 GLRXP35754 106 aa11.08□□□□□ -0.64
PTPN1-202ENST00000541713 BSPH1Q075Z2 132 aa11.08□□□□□ -0.64
PTPN1-202ENST00000541713 SAMD10Q9BYL1 202 aa11.08□□□□□ -0.64
PTPN1-202ENST00000541713 TIMM9Q9Y5J7 89 aa11.08□□□□□ -0.64
PTPN1-202ENST00000541713 IGLV1-44P01699 117 aa11.08□□□□□ -0.64
PTPN1-202ENST00000541713 NTF3P20783 257 aa11.08□□□□□ -0.64
PTPN1-202ENST00000541713 TDRG1Q3Y452 100 aa11.08□□□□□ -0.64
PTPN1-202ENST00000541713 CYB5R2Q6BCY4 276 aa11.08□□□□□ -0.64
PTPN1-202ENST00000541713 C1orf159Q96HA4 380 aa11.08□□□□□ -0.64
PTPN1-202ENST00000541713 RITA1Q96K30 269 aa11.08□□□□□ -0.64
PTPN1-202ENST00000541713 ZNF729A6NN14 1252 aaPredicted RBP11.08□□□□□ -0.64
PTPN1-202ENST00000541713 SNURFLB1AK76 121 aa11.08□□□□□ -0.64
PTPN1-202ENST00000541713 YPEL1O60688 119 aa11.08□□□□□ -0.64
PTPN1-202ENST00000541713 CT45A6P0DMU7 189 aa11.08□□□□□ -0.64
PTPN1-202ENST00000541713 CT45A5P0DMU8 189 aa11.08□□□□□ -0.64
PTPN1-202ENST00000541713 CT45A7P0DMV0 189 aa11.08□□□□□ -0.64
PTPN1-202ENST00000541713 PMCHP20382 165 aa11.08□□□□□ -0.64
PTPN1-202ENST00000541713 RPL29P47914 159 aaKnown RBP11.08□□□□□ -0.64
PTPN1-202ENST00000541713 MBNL2Q5VZF2 373 aaKnown RBP11.08□□□□□ -0.64
PTPN1-202ENST00000541713 PRR7Q8TB68 274 aa11.08□□□□□ -0.64
PTPN1-202ENST00000541713 MISP3Q96FF7 219 aa11.08□□□□□ -0.64
PTPN1-202ENST00000541713 YPEL2Q96QA6 119 aa11.08□□□□□ -0.64
PTPN1-202ENST00000541713 K7EN84 100 aa11.07□□□□□ -0.64
PTPN1-202ENST00000541713 CXorf1O96002 111 aa11.07□□□□□ -0.64
PTPN1-202ENST00000541713 TNFSF4P23510 183 aa11.07□□□□□ -0.64
PTPN1-202ENST00000541713 MAS1LP35410 378 aa11.07□□□□□ -0.64
PTPN1-202ENST00000541713 RANP62826 216 aaKnown RBP11.07□□□□□ -0.64
PTPN1-202ENST00000541713 ZNF705AQ6ZN79 300 aaPredicted RBP11.07□□□□□ -0.64
PTPN1-202ENST00000541713 NPIPB3Q92617 1050 aa11.07□□□□□ -0.64
PTPN1-202ENST00000541713 MS4A10Q96PG2 267 aa11.07□□□□□ -0.64
PTPN1-202ENST00000541713 GAFA1Q96PS6 74 aa11.07□□□□□ -0.64
PTPN1-202ENST00000541713 SAP30LQ9HAJ7 183 aa11.07□□□□□ -0.64
PTPN1-202ENST00000541713 RYDENQ9NUL5 291 aaKnown RBP11.07□□□□□ -0.64
PTPN1-202ENST00000541713 PAM16Q9Y3D7 125 aa11.07□□□□□ -0.64
PTPN1-202ENST00000541713 CELSR1Q9NYQ6 3014 aa11.07□□□□□ -0.64
PTPN1-202ENST00000541713 ELOA3CA0A087WX78 387 aaPredicted RBP11.07□□□□□ -0.64
PTPN1-202ENST00000541713 C15orf61A6NNL5 157 aa11.07□□□□□ -0.64
PTPN1-202ENST00000541713 RHOBP62745 196 aa11.07□□□□□ -0.64
PTPN1-202ENST00000541713 CENPWQ5EE01 88 aa11.07□□□□□ -0.64
PTPN1-202ENST00000541713 TOMM20LQ6UXN7 152 aa11.07□□□□□ -0.64
PTPN1-202ENST00000541713 GNG5P63218 68 aa11.07□□□□□ -0.64
PTPN1-202ENST00000541713 KRTCAP3Q53RY4 240 aa11.07□□□□□ -0.64
PTPN1-202ENST00000541713 TIMM23BQ5SRD1 257 aa11.07□□□□□ -0.64
PTPN1-202ENST00000541713 OR1L6Q8NGR2 347 aa11.07□□□□□ -0.64
PTPN1-202ENST00000541713 NAT8BQ9UHF3 227 aa11.07□□□□□ -0.64
PTPN1-202ENST00000541713 J3QW42 95 aa11.06□□□□□ -0.64
PTPN1-202ENST00000541713 GNG4P50150 75 aa11.06□□□□□ -0.64
PTPN1-202ENST00000541713 KRTDAPP60985 99 aa11.06□□□□□ -0.64
PTPN1-202ENST00000541713 GUSBP1Q15486 140 aa11.06□□□□□ -0.64
PTPN1-202ENST00000541713 C1orf185Q5T7R7 199 aa11.06□□□□□ -0.64
PTPN1-202ENST00000541713 GFRALQ6UXV0 394 aa11.06□□□□□ -0.64
PTPN1-202ENST00000541713 DMRTC2Q8IXT2 367 aaPredicted RBP11.06□□□□□ -0.64
PTPN1-202ENST00000541713 ATOH7Q8N100 152 aa11.06□□□□□ -0.64
PTPN1-202ENST00000541713 TEX50A0A1B0GTY4 177 aa11.06□□□□□ -0.64
PTPN1-202ENST00000541713 HELTA6NFD8 242 aa11.06□□□□□ -0.64
PTPN1-202ENST00000541713 ZNF891A8MT65 544 aaPredicted RBP11.06□□□□□ -0.64
PTPN1-202ENST00000541713 WNT2P09544 360 aa11.06□□□□□ -0.64
PTPN1-202ENST00000541713 STAG3L2P0CL84 134 aa11.06□□□□□ -0.64
PTPN1-202ENST00000541713 STAG3L3P0CL85 134 aa11.06□□□□□ -0.64
PTPN1-202ENST00000541713 CAMPP49913 170 aa11.06□□□□□ -0.64
PTPN1-202ENST00000541713 FOXC1Q12948 553 aa11.06□□□□□ -0.64
PTPN1-202ENST00000541713 TMEM18Q96B42 140 aa11.06□□□□□ -0.64
PTPN1-202ENST00000541713 CACNA1AO00555 2505 aa11.06□□□□□ -0.64
PTPN1-202ENST00000541713 PDE6DO43924 150 aa11.05□□□□□ -0.64
PTPN1-202ENST00000541713 MZT1Q08AG7 82 aa11.05□□□□□ -0.64
PTPN1-202ENST00000541713 RTL8BQ17RB0 113 aa11.05□□□□□ -0.64
PTPN1-202ENST00000541713 RBMXL3Q8N7X1 1067 aaKnown RBP11.05□□□□□ -0.64
PTPN1-202ENST00000541713 VN1R17PQ8TDU5 208 aa11.05□□□□□ -0.64
PTPN1-202ENST00000541713 DPRXA6NFQ7 191 aa11.05□□□□□ -0.64
PTPN1-202ENST00000541713 CNTFRP26992 372 aa11.05□□□□□ -0.64
PTPN1-202ENST00000541713 PAX5Q02548 391 aa11.05□□□□□ -0.64
PTPN1-202ENST00000541713 FAM19A2Q8N3H0 131 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms