RNA–Protein interactions for RNA: ENST00000540998.5

CDC42SE1-207, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDC42SE1, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-207ENST00000540998 TNFSF13O75888 250 aa8.5□□□□□ -1.05
CDC42SE1-207ENST00000540998 GPR6P46095 362 aaPredicted RBP8.5□□□□□ -1.05
CDC42SE1-207ENST00000540998 GNG4P50150 75 aa8.5□□□□□ -1.05
CDC42SE1-207ENST00000540998 RPEL1Q2QD12 228 aa8.5□□□□□ -1.05
CDC42SE1-207ENST00000540998 TEPPQ6URK8 271 aa8.5□□□□□ -1.05
CDC42SE1-207ENST00000540998 MIEN1Q9BRT3 115 aa8.5□□□□□ -1.05
CDC42SE1-207ENST00000540998 DIRC3C9JPN6 131 aa8.49□□□□□ -1.05
CDC42SE1-207ENST00000540998 SELENOTP62341 195 aa8.49□□□□□ -1.05
CDC42SE1-207ENST00000540998 FAM90A1Q86YD7 464 aa8.49□□□□□ -1.05
CDC42SE1-207ENST00000540998 GCSAMQ8N6F7 178 aa8.49□□□□□ -1.05
CDC42SE1-207ENST00000540998 SIGLECL1Q8N7X8 197 aa8.49□□□□□ -1.05
CDC42SE1-207ENST00000540998 SSBP4Q9BWG4 385 aaPredicted RBP8.49□□□□□ -1.05
CDC42SE1-207ENST00000540998 NPVFQ9HCQ7 196 aa8.49□□□□□ -1.05
CDC42SE1-207ENST00000540998 NRN1Q9NPD7 142 aa8.49□□□□□ -1.05
CDC42SE1-207ENST00000540998 DSCAML1Q8TD84 2053 aa8.49□□□□□ -1.05
CDC42SE1-207ENST00000540998 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.49□□□□□ -1.05
CDC42SE1-207ENST00000540998 SRRM4A7MD48 611 aaKnown RBP8.49□□□□□ -1.05
CDC42SE1-207ENST00000540998 LINC00869P0C866 280 aa8.49□□□□□ -1.05
CDC42SE1-207ENST00000540998 BTF3P20290 206 aaKnown RBP8.49□□□□□ -1.05
CDC42SE1-207ENST00000540998 ZNF83P51522 516 aa8.49□□□□□ -1.05
CDC42SE1-207ENST00000540998 PRR27Q6MZM9 219 aa8.49□□□□□ -1.05
CDC42SE1-207ENST00000540998 FAM214BQ7L5A3 538 aa8.49□□□□□ -1.05
CDC42SE1-207ENST00000540998 HELTA6NFD8 242 aa8.49□□□□□ -1.05
CDC42SE1-207ENST00000540998 M0QZ24 198 aa8.49□□□□□ -1.05
CDC42SE1-207ENST00000540998 ZNF253O75346 499 aa8.49□□□□□ -1.05
CDC42SE1-207ENST00000540998 PYYP10082 97 aa8.49□□□□□ -1.05
CDC42SE1-207ENST00000540998 HOXC12P31275 282 aa8.49□□□□□ -1.05
CDC42SE1-207ENST00000540998 KIR2DL2P43627 348 aaPredicted RBP8.49□□□□□ -1.05
CDC42SE1-207ENST00000540998 REG1BP48304 166 aa8.49□□□□□ -1.05
CDC42SE1-207ENST00000540998 CCL11P51671 97 aa8.49□□□□□ -1.05
CDC42SE1-207ENST00000540998 RHOBP62745 196 aa8.49□□□□□ -1.05
CDC42SE1-207ENST00000540998 C1orf210Q8IVY1 113 aa8.49□□□□□ -1.05
CDC42SE1-207ENST00000540998 STPG4Q8N801 248 aa8.49□□□□□ -1.05
CDC42SE1-207ENST00000540998 NABP2Q9BQ15 211 aa8.49□□□□□ -1.05
CDC42SE1-207ENST00000540998 IGHV1-18A0A0C4DH31 117 aa8.48□□□□□ -1.05
CDC42SE1-207ENST00000540998 A0A1W2PS18 150 aa8.48□□□□□ -1.05
CDC42SE1-207ENST00000540998 APELAP0DMC3 54 aa8.48□□□□□ -1.05
CDC42SE1-207ENST00000540998 PRB3Q04118 309 aaPredicted RBP8.48□□□□□ -1.05
CDC42SE1-207ENST00000540998 SLAQ13239 276 aa8.48□□□□□ -1.05
CDC42SE1-207ENST00000540998 TMEM183BQ1AE95 376 aa8.48□□□□□ -1.05
CDC42SE1-207ENST00000540998 SPATA45Q537H7 98 aa8.48□□□□□ -1.05
CDC42SE1-207ENST00000540998 GMPPAQ96IJ6 420 aaPredicted RBP8.48□□□□□ -1.05
CDC42SE1-207ENST00000540998 OR2V2Q96R30 315 aa8.48□□□□□ -1.05
CDC42SE1-207ENST00000540998 TUBG2Q9NRH3 451 aa8.48□□□□□ -1.05
CDC42SE1-207ENST00000540998 IDI2-AS1Q9NZ38 188 aa8.48□□□□□ -1.05
CDC42SE1-207ENST00000540998 ACACAQ13085 2346 aa8.48□□□□□ -1.05
CDC42SE1-207ENST00000540998 IGHV2OR16-5A0A0B4J2B6 119 aa8.48□□□□□ -1.05
CDC42SE1-207ENST00000540998 SH2D7A6NKC9 451 aaPredicted RBP8.48□□□□□ -1.05
CDC42SE1-207ENST00000540998 H3BTX0 84 aa8.48□□□□□ -1.05
CDC42SE1-207ENST00000540998 BMPR1BO00238 502 aa8.48□□□□□ -1.05
CDC42SE1-207ENST00000540998 NKX2-8O15522 239 aa8.48□□□□□ -1.05
CDC42SE1-207ENST00000540998 TCF21O43680 179 aa8.48□□□□□ -1.05
CDC42SE1-207ENST00000540998 GPX1P07203 203 aa8.48□□□□□ -1.05
CDC42SE1-207ENST00000540998 PMCHL1Q16048 86 aa8.48□□□□□ -1.05
CDC42SE1-207ENST00000540998 TMEM136Q6ZRR5 245 aa8.48□□□□□ -1.05
CDC42SE1-207ENST00000540998 RPRMLQ8N4K4 120 aa8.48□□□□□ -1.05
CDC42SE1-207ENST00000540998 OR2T6Q8NHC8 308 aa8.48□□□□□ -1.05
CDC42SE1-207ENST00000540998 ST6GALNAC6Q969X2 333 aa8.48□□□□□ -1.05
CDC42SE1-207ENST00000540998 CALYQ9NYX4 217 aa8.48□□□□□ -1.05
CDC42SE1-207ENST00000540998 C15orf61A6NNL5 157 aa8.47□□□□□ -1.05
CDC42SE1-207ENST00000540998 E7EUB6 86 aa8.47□□□□□ -1.05
CDC42SE1-207ENST00000540998 C10orf55Q5SWW7 151 aa8.47□□□□□ -1.05
CDC42SE1-207ENST00000540998 C19orf35Q6ZS72 473 aa8.47□□□□□ -1.05
CDC42SE1-207ENST00000540998 Q6ZT83 130 aa8.47□□□□□ -1.05
CDC42SE1-207ENST00000540998 ZCCHC24Q8N2G6 241 aaKnown RBP8.47□□□□□ -1.05
CDC42SE1-207ENST00000540998 CACNA1BQ00975 2339 aa8.47□□□□□ -1.05
CDC42SE1-207ENST00000540998 A0A1B0GWJ7 208 aa8.47□□□□□ -1.05
CDC42SE1-207ENST00000540998 IGKV3-15P01624 115 aa8.47□□□□□ -1.05
CDC42SE1-207ENST00000540998 TMEM164Q5U3C3 297 aa8.47□□□□□ -1.05
CDC42SE1-207ENST00000540998 C11orf42Q8N5U0 333 aa8.47□□□□□ -1.05
CDC42SE1-207ENST00000540998 KIR3DL3Q8N743 410 aa8.47□□□□□ -1.05
CDC42SE1-207ENST00000540998 FAM216BQ8N7L0 139 aa8.47□□□□□ -1.05
CDC42SE1-207ENST00000540998 ZNF355PQ9NSJ1 428 aa8.47□□□□□ -1.05
CDC42SE1-207ENST00000540998 RPH3ALQ9UNE2 315 aa8.47□□□□□ -1.05
CDC42SE1-207ENST00000540998 OR51B2Q9Y5P1 312 aa8.47□□□□□ -1.05
CDC42SE1-207ENST00000540998 RAI1Q7Z5J4 1906 aaPredicted RBP8.47□□□□□ -1.05
CDC42SE1-207ENST00000540998 BSNQ9UPA5 3926 aa8.47□□□□□ -1.05
CDC42SE1-207ENST00000540998 CORTO00230 105 aa8.47□□□□□ -1.05
CDC42SE1-207ENST00000540998 IGLV2-8P01709 118 aa8.47□□□□□ -1.05
CDC42SE1-207ENST00000540998 ADH4P08319 380 aa8.47□□□□□ -1.05
CDC42SE1-207ENST00000540998 C3orf79P0CE67 100 aa8.47□□□□□ -1.05
CDC42SE1-207ENST00000540998 GNG5P63218 68 aa8.47□□□□□ -1.05
CDC42SE1-207ENST00000540998 PRR20EP86478 221 aa8.47□□□□□ -1.05
CDC42SE1-207ENST00000540998 PRR20CP86479 221 aa8.47□□□□□ -1.05
CDC42SE1-207ENST00000540998 PRR20DP86480 221 aa8.47□□□□□ -1.05
CDC42SE1-207ENST00000540998 PRR20BP86481 221 aa8.47□□□□□ -1.05
CDC42SE1-207ENST00000540998 PRR20AP86496 221 aa8.47□□□□□ -1.05
CDC42SE1-207ENST00000540998 GDF5OSQ5U4N7 250 aa8.47□□□□□ -1.05
CDC42SE1-207ENST00000540998 Q71RC1 249 aaPredicted RBP8.47□□□□□ -1.05
CDC42SE1-207ENST00000540998 DDB2Q92466 427 aa8.47□□□□□ -1.05
CDC42SE1-207ENST00000540998 C20orf144Q9BQM9 153 aa8.47□□□□□ -1.05
CDC42SE1-207ENST00000540998 CLCF1Q9UBD9 225 aa8.47□□□□□ -1.05
CDC42SE1-207ENST00000540998 CDC42EP3Q9UKI2 254 aa8.47□□□□□ -1.05
CDC42SE1-207ENST00000540998 A8MXE2 369 aa8.46□□□□□ -1.05
CDC42SE1-207ENST00000540998 MPDU1O75352 247 aa8.46□□□□□ -1.05
CDC42SE1-207ENST00000540998 C17orf58Q2M2W7 97 aa8.46□□□□□ -1.05
CDC42SE1-207ENST00000540998 RUSC1-AS1Q66K80 236 aa8.46□□□□□ -1.05
CDC42SE1-207ENST00000540998 PRR7Q8TB68 274 aa8.46□□□□□ -1.05
CDC42SE1-207ENST00000540998 ITLN1Q8WWA0 313 aa8.46□□□□□ -1.05
CDC42SE1-207ENST00000540998 STARD4Q96DR4 205 aa8.46□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms