RNA–Protein interactions for RNA: ENST00000540783.5

RAPGEF4-215, Transcript of Rap guanine nucleotide exchange factor 4, human

TSL 2 BASIC

Gene RAPGEF4, Length 3,974 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAPGEF4-215	ENST00000540783	FAM90A5P	A8MXJ8	464 aa		4.68	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	FAM90A23P	A8MXZ1	464 aa		4.68	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	SNURFL	B1AK76	121 aa		4.68	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	DIRC3	C9JPN6	131 aa		4.68	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	FAM90A15P	P0C7V4	464 aa		4.68	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	FAM90A13P	P0C7W8	464 aa		4.68	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	FAM90A14P	P0C7W9	464 aa		4.68	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	FAM90A24P	P0C7X0	464 aa		4.68	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	ARL14EPL	P0DKL9	152 aa		4.68	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	IGHV3-43D	P0DP04	118 aa		4.68	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	MAJIN	Q3KP22	176 aa		4.68	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	COL5A1-AS1	Q5SY13	56 aa		4.68	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	SIGLECL1	Q8N7X8	197 aa		4.68	□□□□□ -1.66
RAPGEF4-215	ENST00000540783		Q8NFD4	153 aa		4.68	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	RFESD	Q8TAC1	157 aa		4.68	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	SSMEM1	Q8WWF3	244 aa		4.68	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	SPSB4	Q96A44	273 aa		4.68	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	JMJD8	Q96S16	334 aa		4.68	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	TXN2	Q99757	166 aa		4.68	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	C20orf144	Q9BQM9	153 aa		4.68	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	FAM234A	Q9H0X4	552 aa		4.68	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	GAL3ST2	Q9H3Q3	398 aa		4.68	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	ADAMTS20	P59510	1910 aa		4.67	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	PMS2P5	A8MQ11	134 aa		4.67	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	RRH	O14718	337 aa		4.67	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	ENSA	O43768	121 aa	Known RBP	4.67	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	IGHV3-7	P01780	117 aa		4.67	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	LINC00614	P0C842	121 aa		4.67	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	HINT1	P49773	126 aa	Predicted RBP	4.67	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	PSG7	Q13046	419 aa		4.67	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	GAGE1	Q13065	139 aa		4.67	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	DEFB113	Q30KQ7	82 aa		4.67	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	SPATA45	Q537H7	98 aa		4.67	□□□□□ -1.66
RAPGEF4-215	ENST00000540783		Q6ZN92	141 aa		4.67	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	LINC00596	Q86U02	117 aa		4.67	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	FAM19A2	Q8N3H0	131 aa		4.67	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	TPRX1	Q8N7U7	411 aa		4.67	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	SCCPDH	Q8NBX0	429 aa		4.67	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	TIMM9	Q9Y5J7	89 aa		4.67	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	MED12L	Q86YW9	2145 aa		4.67	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	PRR14L	Q5THK1	2151 aa		4.67	□□□□□ -1.66
RAPGEF4-215	ENST00000540783		E7EQL1	145 aa		4.67	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	NDUFB8	O95169	186 aa		4.67	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	OR2H2	O95918	312 aa		4.67	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	LIPF	P07098	398 aa		4.67	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	NTF3	P20783	257 aa		4.67	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	USF1	P22415	310 aa	Predicted RBP	4.67	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	COMP	P49747	757 aa	Predicted RBP	4.67	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	PTTG1IP	P53801	180 aa		4.67	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	RPP30	P78346	268 aa	Known RBP	4.67	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	FOXL1	Q12952	345 aa		4.67	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	RNF151	Q2KHN1	245 aa		4.67	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	MIC13	Q5XKP0	118 aa		4.67	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	UNQ5815/PRO19632	Q6UWF5	114 aa		4.67	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	FAM90A1	Q86YD7	464 aa		4.67	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	OR8I2	Q8N0Y5	310 aa		4.67	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	C5orf30	Q96GV9	206 aa		4.67	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	GNB4	Q9HAV0	340 aa		4.67	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	HSPB7	Q9UBY9	170 aa		4.67	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	TLN1	Q9Y490	2541 aa	Known RBP	4.67	□□□□□ -1.66
RAPGEF4-215	ENST00000540783		K7EN84	100 aa		4.67	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	CCL25	O15444	150 aa		4.67	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	OR5G3	P0C626	314 aa		4.67	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	CEACAM3	P40198	252 aa		4.67	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	AMT	P48728	403 aa		4.67	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	FXYD3	Q14802	87 aa		4.67	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	ADIPOQ	Q15848	244 aa		4.67	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	SRSF7	Q16629	238 aa	Known RBP eCLIP	4.67	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	SPATA31B1P	Q5VZV4	182 aa		4.67	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	ETFRF1	Q6IPR1	90 aa		4.67	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	LCN12	Q6JVE5	192 aa		4.67	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	MOB1B	Q7L9L4	216 aa		4.67	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	SAXO1	Q8IYX7	474 aa		4.67	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	SLC35E1	Q96K37	410 aa		4.67	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	UHRF2	Q96PU4	802 aa		4.67	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	QTRT1	Q9BXR0	403 aa	Known RBP	4.67	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	CTNNBIP1	Q9NSA3	81 aa	Predicted RBP	4.67	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	TBL2	Q9Y4P3	447 aa	Known RBP	4.67	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	AMMECR1	Q9Y4X0	333 aa	Predicted RBP	4.67	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	ASPM	Q8IZT6	3477 aa		4.67	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	PRSS47	A8MTI9	375 aa		4.66	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	ANKHD1-EIF4EBP3	H7C0V5	636 aa	Predicted RBP	4.66	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	CDIPT	O14735	213 aa		4.66	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	CELA3B	P08861	270 aa		4.66	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	BRWD1-AS2	P59051	145 aa		4.66	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	SUMO1	P63165	101 aa	Known RBP	4.66	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	PAFAH1B2	P68402	229 aa		4.66	□□□□□ -1.66
RAPGEF4-215	ENST00000540783		Q5PR19	223 aa		4.66	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	COLCA1	Q6ZS62	124 aa		4.66	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	H2BFWT	Q7Z2G1	175 aa		4.66	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	VKORC1L1	Q8N0U8	176 aa		4.66	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	RCHY1	Q96PM5	261 aa		4.66	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	GNG12	Q9UBI6	72 aa		4.66	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	ZFP30	Q9Y2G7	519 aa		4.66	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	WIPI2	Q9Y4P8	454 aa		4.66	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	YTHDF2	Q9Y5A9	579 aa	Known RBP	4.66	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	HELZ2	Q9BYK8	2649 aa	Known RBP	4.66	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	INTS1	Q8N201	2190 aa	Known RBP	4.66	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	TMEM30CP	A0ZSE6	113 aa		4.66	□□□□□ -1.66
RAPGEF4-215	ENST00000540783	C20orf202	A1L168	122 aa		4.66	□□□□□ -1.66

Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms