RNA–Protein interactions for RNA: ENST00000540608.5

NPC1-202, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 2,790 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-202ENST00000540608 LYG1Q8N1E2 194 aa10.06□□□□□ -0.8
NPC1-202ENST00000540608 ST6GALNAC3Q8NDV1 305 aa10.06□□□□□ -0.8
NPC1-202ENST00000540608 SLC35E1Q96K37 410 aa10.06□□□□□ -0.8
NPC1-202ENST00000540608 PLEKHA3Q9HB20 300 aa10.06□□□□□ -0.8
NPC1-202ENST00000540608 OSTCQ9NRP0 149 aa10.06□□□□□ -0.8
NPC1-202ENST00000540608 LAMA5O15230 3695 aa10.06□□□□□ -0.8
NPC1-202ENST00000540608 SPAARA0A1B0GVQ0 90 aa10.06□□□□□ -0.8
NPC1-202ENST00000540608 F2Z2F3 143 aa10.06□□□□□ -0.8
NPC1-202ENST00000540608 MT-ND6P03923 174 aa10.06□□□□□ -0.8
NPC1-202ENST00000540608 PRCDQ00LT1 54 aa10.06□□□□□ -0.8
NPC1-202ENST00000540608 TMEM183BQ1AE95 376 aa10.06□□□□□ -0.8
NPC1-202ENST00000540608 PNKDQ8N490 385 aa10.06□□□□□ -0.8
NPC1-202ENST00000540608 ZNF439Q8NDP4 499 aa10.06□□□□□ -0.8
NPC1-202ENST00000540608 ZNF503Q96F45 646 aa10.06□□□□□ -0.8
NPC1-202ENST00000540608 C19orf24Q9BVV8 132 aa10.06□□□□□ -0.8
NPC1-202ENST00000540608 SAMD10Q9BYL1 202 aa10.06□□□□□ -0.8
NPC1-202ENST00000540608 CACNA1GO43497 2377 aa10.06□□□□□ -0.8
NPC1-202ENST00000540608 UPK2O00526 184 aa10.05□□□□□ -0.8
NPC1-202ENST00000540608 CDKN1AP38936 164 aa10.05□□□□□ -0.8
NPC1-202ENST00000540608 ATP5IP56385 69 aaPredicted RBP10.05□□□□□ -0.8
NPC1-202ENST00000540608 COX19Q49B96 90 aa10.05□□□□□ -0.8
NPC1-202ENST00000540608 DEFB124Q8NES8 71 aa10.05□□□□□ -0.8
NPC1-202ENST00000540608 ASCL3Q9NQ33 180 aa10.05□□□□□ -0.8
NPC1-202ENST00000540608 DKK4Q9UBT3 224 aa10.05□□□□□ -0.8
NPC1-202ENST00000540608 INTS1Q8N201 2190 aaKnown RBP10.05□□□□□ -0.8
NPC1-202ENST00000540608 GPX1P07203 203 aa10.05□□□□□ -0.8
NPC1-202ENST00000540608 TIGITQ495A1 244 aa10.05□□□□□ -0.8
NPC1-202ENST00000540608 VN1R17PQ8TDU5 208 aa10.05□□□□□ -0.8
NPC1-202ENST00000540608 FAM222BQ8WU58 562 aa10.05□□□□□ -0.8
NPC1-202ENST00000540608 GNB4Q9HAV0 340 aa10.05□□□□□ -0.8
NPC1-202ENST00000540608 HEATR1Q9H583 2144 aaKnown RBP10.05□□□□□ -0.8
NPC1-202ENST00000540608 IGKV1OR2-108A0A075B7D4 117 aa10.04□□□□□ -0.8
NPC1-202ENST00000540608 TRAV17A0A0B4J275 112 aa10.04□□□□□ -0.8
NPC1-202ENST00000540608 ISLRO14498 428 aa10.04□□□□□ -0.8
NPC1-202ENST00000540608 SPRY3O43610 288 aa10.04□□□□□ -0.8
NPC1-202ENST00000540608 ZNF83P51522 516 aa10.04□□□□□ -0.8
NPC1-202ENST00000540608 RTL8BQ17RB0 113 aa10.04□□□□□ -0.8
NPC1-202ENST00000540608 FAM201AQ5SY85 155 aa10.04□□□□□ -0.8
NPC1-202ENST00000540608 PIP4P1Q86T03 277 aa10.04□□□□□ -0.8
NPC1-202ENST00000540608 DOLPP1Q86YN1 238 aa10.04□□□□□ -0.8
NPC1-202ENST00000540608 SIGLECL1Q8N7X8 197 aa10.04□□□□□ -0.8
NPC1-202ENST00000540608 ITLN1Q8WWA0 313 aa10.04□□□□□ -0.8
NPC1-202ENST00000540608 FAM122AQ96E09 287 aa10.04□□□□□ -0.8
NPC1-202ENST00000540608 VAMP8Q9BV40 100 aa10.04□□□□□ -0.8
NPC1-202ENST00000540608 RNASE7Q9H1E1 156 aaKnown RBP10.04□□□□□ -0.8
NPC1-202ENST00000540608 NAT8BQ9UHF3 227 aa10.04□□□□□ -0.8
NPC1-202ENST00000540608 TEX50A0A1B0GTY4 177 aa10.04□□□□□ -0.8
NPC1-202ENST00000540608 OR5G3P0C626 314 aa10.04□□□□□ -0.8
NPC1-202ENST00000540608 FTH1P19P0C7X4 201 aa10.04□□□□□ -0.8
NPC1-202ENST00000540608 G0S2P27469 103 aa10.04□□□□□ -0.8
NPC1-202ENST00000540608 BRS3P32247 399 aa10.04□□□□□ -0.8
NPC1-202ENST00000540608 COMPP49747 757 aaPredicted RBP10.04□□□□□ -0.8
NPC1-202ENST00000540608 KLF3P57682 345 aaPredicted RBP10.04□□□□□ -0.8
NPC1-202ENST00000540608 TAS2R45P59539 299 aa10.04□□□□□ -0.8
NPC1-202ENST00000540608 C2orf83Q53S99 150 aa10.04□□□□□ -0.8
NPC1-202ENST00000540608 OR10J3Q5JRS4 329 aa10.04□□□□□ -0.8
NPC1-202ENST00000540608 TMEM136Q6ZRR5 245 aa10.04□□□□□ -0.8
NPC1-202ENST00000540608 MOB3BQ86TA1 216 aa10.04□□□□□ -0.8
NPC1-202ENST00000540608 GLRXP35754 106 aa10.03□□□□□ -0.8
NPC1-202ENST00000540608 ALKBH2Q6NS38 261 aa10.03□□□□□ -0.8
NPC1-202ENST00000540608 LINC00574Q9H8X3 128 aa10.03□□□□□ -0.8
NPC1-202ENST00000540608 PAM16Q9Y3D7 125 aa10.03□□□□□ -0.8
NPC1-202ENST00000540608 CACNA1HO95180 2353 aa10.03□□□□□ -0.8
NPC1-202ENST00000540608 A0A1W2PRE2 83 aa10.03□□□□□ -0.8
NPC1-202ENST00000540608 SRRM4A7MD48 611 aaKnown RBP10.03□□□□□ -0.8
NPC1-202ENST00000540608 GGTLC3B5MD39 225 aa10.03□□□□□ -0.8
NPC1-202ENST00000540608 OR7C2O60412 319 aa10.03□□□□□ -0.8
NPC1-202ENST00000540608 CT45A6P0DMU7 189 aa10.03□□□□□ -0.8
NPC1-202ENST00000540608 CT45A5P0DMU8 189 aa10.03□□□□□ -0.8
NPC1-202ENST00000540608 CT45A7P0DMV0 189 aa10.03□□□□□ -0.8
NPC1-202ENST00000540608 GATA2P23769 480 aaPredicted RBP10.03□□□□□ -0.8
NPC1-202ENST00000540608 GATA4P43694 442 aa10.03□□□□□ -0.8
NPC1-202ENST00000540608 PPOXP50336 477 aa10.03□□□□□ -0.8
NPC1-202ENST00000540608 SEM1Q6ZVN7 128 aa10.03□□□□□ -0.8
NPC1-202ENST00000540608 SMIM27A0A1W2PRY6 76 aa10.03□□□□□ -0.8
NPC1-202ENST00000540608 M0R1B8 84 aa10.03□□□□□ -0.8
NPC1-202ENST00000540608 SPINK4O60575 86 aa10.03□□□□□ -0.8
NPC1-202ENST00000540608 IGLV2-8P01709 118 aa10.03□□□□□ -0.8
NPC1-202ENST00000540608 RPLP1P05386 114 aaKnown RBP10.03□□□□□ -0.8
NPC1-202ENST00000540608 SUMO1P63165 101 aaKnown RBP10.03□□□□□ -0.8
NPC1-202ENST00000540608 DUX4L9Q6RFH8 374 aaPredicted RBP10.03□□□□□ -0.8
NPC1-202ENST00000540608 OR1L8Q8NGR8 309 aa10.03□□□□□ -0.8
NPC1-202ENST00000540608 RNF7Q9UBF6 113 aa10.03□□□□□ -0.8
NPC1-202ENST00000540608 FBXL7Q9UJT9 491 aa10.03□□□□□ -0.8
NPC1-202ENST00000540608 SVILO95425 2214 aa10.02□□□□□ -0.8
NPC1-202ENST00000540608 IGKV1-16P04430 117 aa10.02□□□□□ -0.81
NPC1-202ENST00000540608 C8orf88P0DMB2 117 aa10.02□□□□□ -0.81
NPC1-202ENST00000540608 IRF2P14316 349 aa10.02□□□□□ -0.81
NPC1-202ENST00000540608 ZNF25P17030 456 aaPredicted RBP10.02□□□□□ -0.81
NPC1-202ENST00000540608 GNG10P50151 68 aa10.02□□□□□ -0.81
NPC1-202ENST00000540608 FXYD3Q14802 87 aa10.02□□□□□ -0.81
NPC1-202ENST00000540608 DEFB109BQ30KR1 87 aa10.02□□□□□ -0.81
NPC1-202ENST00000540608 STUMQ69YW2 141 aa10.02□□□□□ -0.81
NPC1-202ENST00000540608 IGF2BP2-AS1Q96M15 143 aa10.02□□□□□ -0.81
NPC1-202ENST00000540608 SLC25A33Q9BSK2 321 aa10.02□□□□□ -0.81
NPC1-202ENST00000540608 COL25A1Q9BXS0 654 aaPredicted RBP10.02□□□□□ -0.81
NPC1-202ENST00000540608 SLC35D1Q9NTN3 355 aa10.02□□□□□ -0.81
NPC1-202ENST00000540608 ZNF586Q9NXT0 402 aa10.02□□□□□ -0.81
NPC1-202ENST00000540608 EP300Q09472 2414 aaPredicted RBP10.02□□□□□ -0.81
NPC1-202ENST00000540608 IGLV3-9A0A075B6K5 115 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms