RNA–Protein interactions for RNA: ENST00000540475.5

SEMA4D-223, Transcript of semaphorin 4D, humanhuman

TSL 3

Gene SEMA4D, Length 826 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-223ENST00000540475 SLC38A6Q8IZM9 456 aa9.8□□□□□ -0.84
SEMA4D-223ENST00000540475 ZNF114Q8NC26 417 aa9.8□□□□□ -0.84
SEMA4D-223ENST00000540475 TMEM56Q96MV1 263 aa9.8□□□□□ -0.84
SEMA4D-223ENST00000540475 NSG2Q9Y328 171 aa9.8□□□□□ -0.84
SEMA4D-223ENST00000540475 NDUFA4O00483 81 aa9.79□□□□□ -0.84
SEMA4D-223ENST00000540475 GABARAPO95166 117 aa9.79□□□□□ -0.84
SEMA4D-223ENST00000540475 ADMP35318 185 aa9.79□□□□□ -0.84
SEMA4D-223ENST00000540475 RND3P61587 244 aa9.79□□□□□ -0.84
SEMA4D-223ENST00000540475 TSPAN5P62079 268 aa9.79□□□□□ -0.84
SEMA4D-223ENST00000540475 PHLDA2Q53GA4 152 aa9.79□□□□□ -0.84
SEMA4D-223ENST00000540475 BTNL8Q6UX41 500 aa9.79□□□□□ -0.84
SEMA4D-223ENST00000540475 TBC1D26Q86UD7 250 aa9.79□□□□□ -0.84
SEMA4D-223ENST00000540475 OR1P1Q8NH06 330 aa9.79□□□□□ -0.84
SEMA4D-223ENST00000540475 ZNF486Q96H40 463 aaPredicted RBP9.79□□□□□ -0.84
SEMA4D-223ENST00000540475 C21orf62Q9NYP8 219 aa9.79□□□□□ -0.84
SEMA4D-223ENST00000540475 OR2T8A6NH00 312 aa9.78□□□□□ -0.84
SEMA4D-223ENST00000540475 TSPAN4O14817 238 aa9.78□□□□□ -0.84
SEMA4D-223ENST00000540475 CTSGP08311 255 aa9.78□□□□□ -0.84
SEMA4D-223ENST00000540475 SMIM18P0DKX4 95 aa9.78□□□□□ -0.84
SEMA4D-223ENST00000540475 S100GP29377 79 aa9.78□□□□□ -0.84
SEMA4D-223ENST00000540475 ZFAND6Q6FIF0 208 aa9.78□□□□□ -0.84
SEMA4D-223ENST00000540475 SNX29P2Q8IUI4 249 aa9.78□□□□□ -0.84
SEMA4D-223ENST00000540475 OR2C3Q8N628 320 aa9.78□□□□□ -0.84
SEMA4D-223ENST00000540475 OR52B4Q8NGK2 314 aa9.78□□□□□ -0.84
SEMA4D-223ENST00000540475 SPAG8Q99932 426 aaPredicted RBP9.78□□□□□ -0.84
SEMA4D-223ENST00000540475 FAM110AQ9BQ89 295 aa9.78□□□□□ -0.84
SEMA4D-223ENST00000540475 CHRDL1Q9BU40 450 aa9.78□□□□□ -0.84
SEMA4D-223ENST00000540475 RETNQ9HD89 108 aa9.78□□□□□ -0.84
SEMA4D-223ENST00000540475 DAZ1Q9NQZ3 744 aaKnown RBP9.78□□□□□ -0.84
SEMA4D-223ENST00000540475 C15orf62A8K5M9 175 aa9.77□□□□□ -0.85
SEMA4D-223ENST00000540475 INS-IGF2F8WCM5 200 aa9.77□□□□□ -0.85
SEMA4D-223ENST00000540475 I3L2K1 104 aa9.77□□□□□ -0.85
SEMA4D-223ENST00000540475 SCAF4O95104 1147 aaKnown RBP9.77□□□□□ -0.85
SEMA4D-223ENST00000540475 P0C879 139 aa9.77□□□□□ -0.85
SEMA4D-223ENST00000540475 ZNF182P17025 639 aaPredicted RBP9.77□□□□□ -0.85
SEMA4D-223ENST00000540475 TBPP20226 339 aa9.77□□□□□ -0.85
SEMA4D-223ENST00000540475 HSPE1P61604 102 aaKnown RBP9.77□□□□□ -0.85
SEMA4D-223ENST00000540475 PRCDQ00LT1 54 aa9.77□□□□□ -0.85
SEMA4D-223ENST00000540475 PVRIGQ6DKI7 326 aa9.77□□□□□ -0.85
SEMA4D-223ENST00000540475 MZT2AQ6P582 158 aa9.77□□□□□ -0.85
SEMA4D-223ENST00000540475 RBPMS2Q6ZRY4 209 aaKnown RBP9.77□□□□□ -0.85
SEMA4D-223ENST00000540475 ARRDC1Q8N5I2 433 aa9.77□□□□□ -0.85
SEMA4D-223ENST00000540475 IL17DQ8TAD2 202 aa9.77□□□□□ -0.85
SEMA4D-223ENST00000540475 OR10C1Q96KK4 312 aa9.77□□□□□ -0.85
SEMA4D-223ENST00000540475 TXN2Q99757 166 aa9.77□□□□□ -0.85
SEMA4D-223ENST00000540475 GAR1Q9NY12 217 aaKnown RBP9.77□□□□□ -0.85
SEMA4D-223ENST00000540475 KLK11Q9UBX7 282 aa9.77□□□□□ -0.85
SEMA4D-223ENST00000540475 MTFP1Q9UDX5 166 aa9.77□□□□□ -0.85
SEMA4D-223ENST00000540475 LOC102724200A0A096LPH7 203 aaPredicted RBP9.76□□□□□ -0.85
SEMA4D-223ENST00000540475 IGHV3-35A0A0C4DH35 117 aa9.76□□□□□ -0.85
SEMA4D-223ENST00000540475 H2BFWTQ7Z2G1 175 aa9.76□□□□□ -0.85
SEMA4D-223ENST00000540475 OR4A16Q8NH70 328 aa9.76□□□□□ -0.85
SEMA4D-223ENST00000540475 C15orf40Q8WUR7 153 aa9.76□□□□□ -0.85
SEMA4D-223ENST00000540475 AP3S1Q92572 193 aa9.76□□□□□ -0.85
SEMA4D-223ENST00000540475 ABHD1Q96SE0 405 aa9.76□□□□□ -0.85
SEMA4D-223ENST00000540475 GGTLC1Q9BX51 225 aa9.76□□□□□ -0.85
SEMA4D-223ENST00000540475 HINT2Q9BX68 163 aa9.76□□□□□ -0.85
SEMA4D-223ENST00000540475 NAA50Q9GZZ1 169 aaKnown RBP9.76□□□□□ -0.85
SEMA4D-223ENST00000540475 SELENOKQ9Y6D0 94 aa9.76□□□□□ -0.85
SEMA4D-223ENST00000540475 CD74P04233 296 aa9.75□□□□□ -0.85
SEMA4D-223ENST00000540475 LAMTOR1Q6IAA8 161 aa9.75□□□□□ -0.85
SEMA4D-223ENST00000540475 WFDC3Q8IUB2 231 aa9.75□□□□□ -0.85
SEMA4D-223ENST00000540475 OR52I2Q8NH67 350 aa9.75□□□□□ -0.85
SEMA4D-223ENST00000540475 MRGPRFQ96AM1 343 aa9.75□□□□□ -0.85
SEMA4D-223ENST00000540475 OVOL2Q9BRP0 275 aa9.75□□□□□ -0.85
SEMA4D-223ENST00000540475 IGHV3-21A0A0B4J1V1 117 aa9.74□□□□□ -0.85
SEMA4D-223ENST00000540475 A0A0B4J293 547 aa9.74□□□□□ -0.85
SEMA4D-223ENST00000540475 M0QYG6 137 aa9.74□□□□□ -0.85
SEMA4D-223ENST00000540475 IGKV1-5P01602 117 aa9.74□□□□□ -0.85
SEMA4D-223ENST00000540475 CD3DP04234 171 aa9.74□□□□□ -0.85
SEMA4D-223ENST00000540475 ALDH3B2P48448 385 aa9.74□□□□□ -0.85
SEMA4D-223ENST00000540475 MFAP4P55083 255 aa9.74□□□□□ -0.85
SEMA4D-223ENST00000540475 RNASE10Q5GAN6 216 aaKnown RBP9.74□□□□□ -0.85
SEMA4D-223ENST00000540475 GPR107Q5VW38 600 aa9.74□□□□□ -0.85
SEMA4D-223ENST00000540475 Q6ZWC4 215 aa9.74□□□□□ -0.85
SEMA4D-223ENST00000540475 TMEM229BQ8NBD8 167 aa9.74□□□□□ -0.85
SEMA4D-223ENST00000540475 TERB2Q8NHR7 220 aa9.74□□□□□ -0.85
SEMA4D-223ENST00000540475 NXF2Q9GZY0 626 aaKnown RBP9.74□□□□□ -0.85
SEMA4D-223ENST00000540475 MIXL1Q9H2W2 232 aa9.74□□□□□ -0.85
SEMA4D-223ENST00000540475 EXTL2Q9UBQ6 330 aa9.74□□□□□ -0.85
SEMA4D-223ENST00000540475 SMPXQ9UHP9 88 aa9.74□□□□□ -0.85
SEMA4D-223ENST00000540475 TP53TG1Q9Y2A0 90 aa9.74□□□□□ -0.85
SEMA4D-223ENST00000540475 FAM25AB3EWG3 89 aa9.73□□□□□ -0.85
SEMA4D-223ENST00000540475 FAM25CB3EWG5 89 aa9.73□□□□□ -0.85
SEMA4D-223ENST00000540475 FAM25GB3EWG6 89 aa9.73□□□□□ -0.85
SEMA4D-223ENST00000540475 B3GALNT1O75752 331 aa9.73□□□□□ -0.85
SEMA4D-223ENST00000540475 PIGPP57054 158 aa9.73□□□□□ -0.85
SEMA4D-223ENST00000540475 ERHP84090 104 aaKnown RBP9.73□□□□□ -0.85
SEMA4D-223ENST00000540475 SSBP1Q04837 148 aaKnown RBP9.73□□□□□ -0.85
SEMA4D-223ENST00000540475 RELQ04864 619 aaPredicted RBP9.73□□□□□ -0.85
SEMA4D-223ENST00000540475 ODF3L2Q3SX64 289 aa9.73□□□□□ -0.85
SEMA4D-223ENST00000540475 AARDQ4LEZ3 155 aa9.73□□□□□ -0.85
SEMA4D-223ENST00000540475 Q56UQ5 140 aa9.73□□□□□ -0.85
SEMA4D-223ENST00000540475 FAM90A2PQ658T7 463 aa9.73□□□□□ -0.85
SEMA4D-223ENST00000540475 TP53RKQ96S44 253 aa9.73□□□□□ -0.85
SEMA4D-223ENST00000540475 KMT2AQ03164 3969 aa9.73□□□□□ -0.85
SEMA4D-223ENST00000540475 KIR2DL5BA0A0G2JN68 375 aa9.72□□□□□ -0.85
SEMA4D-223ENST00000540475 KIR2DL5BA0A0G2JPC4 375 aa9.72□□□□□ -0.85
SEMA4D-223ENST00000540475 IGHV7-4-1A0A0J9YVY3 117 aa9.72□□□□□ -0.85
SEMA4D-223ENST00000540475 C3orf85A0A1B0GTC6 90 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 121.9 ms