RNA–Protein interactions for RNA: ENST00000540017.6

SNRPA1-203, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 506 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-203ENST00000540017 SLC25A24Q6NUK1 477 aa13.96□□□□□ -0.17
SNRPA1-203ENST00000540017 SELENOHQ8IZQ5 122 aaKnown RBP13.96□□□□□ -0.17
SNRPA1-203ENST00000540017 OR9G4Q8NGQ1 327 aa13.96□□□□□ -0.17
SNRPA1-203ENST00000540017 EEF1AKMT3Q96AZ1 226 aa13.96□□□□□ -0.17
SNRPA1-203ENST00000540017 TMEM56Q96MV1 263 aa13.96□□□□□ -0.17
SNRPA1-203ENST00000540017 ST8SIA3O43173 380 aa13.95□□□□□ -0.18
SNRPA1-203ENST00000540017 OR2C1O95371 312 aa13.95□□□□□ -0.18
SNRPA1-203ENST00000540017 SUPT4H1P63272 117 aaKnown RBP13.95□□□□□ -0.18
SNRPA1-203ENST00000540017 DHODHQ02127 395 aa13.95□□□□□ -0.18
SNRPA1-203ENST00000540017 TMEM187Q14656 261 aa13.95□□□□□ -0.18
SNRPA1-203ENST00000540017 OR2C3Q8N628 320 aa13.95□□□□□ -0.18
SNRPA1-203ENST00000540017 ZNF502Q8TBZ5 544 aa13.95□□□□□ -0.18
SNRPA1-203ENST00000540017 RBPMSQ93062 196 aaKnown RBP13.95□□□□□ -0.18
SNRPA1-203ENST00000540017 OR4C12Q96R67 309 aa13.95□□□□□ -0.18
SNRPA1-203ENST00000540017 ELOVL1Q9BW60 279 aa13.95□□□□□ -0.18
SNRPA1-203ENST00000540017 ZMAT5Q9UDW3 170 aaKnown RBP13.95□□□□□ -0.18
SNRPA1-203ENST00000540017 IGHV3-21A0A0B4J1V1 117 aa13.94□□□□□ -0.18
SNRPA1-203ENST00000540017 ATG12O94817 140 aa13.94□□□□□ -0.18
SNRPA1-203ENST00000540017 CSN3P07498 182 aa13.94□□□□□ -0.18
SNRPA1-203ENST00000540017 SPNP16150 400 aa13.94□□□□□ -0.18
SNRPA1-203ENST00000540017 AKR1C4P17516 323 aa13.94□□□□□ -0.18
SNRPA1-203ENST00000540017 DEFB121Q5J5C9 76 aa13.94□□□□□ -0.18
SNRPA1-203ENST00000540017 TMEM268Q5VZI3 342 aa13.94□□□□□ -0.18
SNRPA1-203ENST00000540017 ZNF57Q68EA5 555 aaPredicted RBP13.94□□□□□ -0.18
SNRPA1-203ENST00000540017 SGPP2Q8IWX5 399 aa13.94□□□□□ -0.18
SNRPA1-203ENST00000540017 RRNAD1Q96FB5 475 aaKnown RBP13.94□□□□□ -0.18
SNRPA1-203ENST00000540017 GALNT14Q96FL9 552 aa13.94□□□□□ -0.18
SNRPA1-203ENST00000540017 CXorf58Q96LI9 332 aa13.94□□□□□ -0.18
SNRPA1-203ENST00000540017 SCGB3A2Q96PL1 93 aa13.94□□□□□ -0.18
SNRPA1-203ENST00000540017 ZC4H2Q9NQZ6 224 aa13.94□□□□□ -0.18
SNRPA1-203ENST00000540017 ZNF256Q9Y2P7 627 aaPredicted RBP13.94□□□□□ -0.18
SNRPA1-203ENST00000540017 TMEM56-RWDD3S4R434 201 aa13.94□□□□□ -0.18
SNRPA1-203ENST00000540017 TRBV7-1A0A0A6YYK4 115 aa13.93□□□□□ -0.18
SNRPA1-203ENST00000540017 GGCTO75223 188 aaKnown RBP13.93□□□□□ -0.18
SNRPA1-203ENST00000540017 IGLV1-51P01701 117 aa13.93□□□□□ -0.18
SNRPA1-203ENST00000540017 CLEC3BP05452 202 aa13.93□□□□□ -0.18
SNRPA1-203ENST00000540017 ARL3P36405 182 aa13.93□□□□□ -0.18
SNRPA1-203ENST00000540017 FAM209BQ5JX69 171 aa13.93□□□□□ -0.18
SNRPA1-203ENST00000540017 ADAMTSL5Q6ZMM2 481 aa13.93□□□□□ -0.18
SNRPA1-203ENST00000540017 DEDD2Q8WXF8 326 aa13.93□□□□□ -0.18
SNRPA1-203ENST00000540017 GPR146Q96CH1 333 aa13.93□□□□□ -0.18
SNRPA1-203ENST00000540017 THYN1Q9P016 225 aa13.93□□□□□ -0.18
SNRPA1-203ENST00000540017 K7EIM0 57 aa13.92□□□□□ -0.18
SNRPA1-203ENST00000540017 EDN2P20800 178 aa13.92□□□□□ -0.18
SNRPA1-203ENST00000540017 GPR183P32249 361 aa13.92□□□□□ -0.18
SNRPA1-203ENST00000540017 TATDN3Q17R31 274 aa13.92□□□□□ -0.18
SNRPA1-203ENST00000540017 OR1P1Q8NH06 330 aa13.92□□□□□ -0.18
SNRPA1-203ENST00000540017 RNASE11Q8TAA1 199 aaKnown RBP13.92□□□□□ -0.18
SNRPA1-203ENST00000540017 VN1R17PQ8TDU5 208 aa13.92□□□□□ -0.18
SNRPA1-203ENST00000540017 KCNIP3Q9Y2W7 256 aa13.92□□□□□ -0.18
SNRPA1-203ENST00000540017 LSM4Q9Y4Z0 139 aaKnown RBP13.92□□□□□ -0.18
SNRPA1-203ENST00000540017 A6NHS1 94 aa13.91□□□□□ -0.18
SNRPA1-203ENST00000540017 F8W735 103 aaPredicted RBP13.91□□□□□ -0.18
SNRPA1-203ENST00000540017 LY86O95711 162 aa13.91□□□□□ -0.18
SNRPA1-203ENST00000540017 IFNA17P01571 189 aa13.91□□□□□ -0.18
SNRPA1-203ENST00000540017 CCR6P51684 374 aa13.91□□□□□ -0.18
SNRPA1-203ENST00000540017 AARDQ4LEZ3 155 aa13.91□□□□□ -0.18
SNRPA1-203ENST00000540017 TMED4Q7Z7H5 227 aa13.91□□□□□ -0.18
SNRPA1-203ENST00000540017 FAM219AQ8IW50 185 aa13.91□□□□□ -0.18
SNRPA1-203ENST00000540017 SLC35G3Q8N808 338 aa13.91□□□□□ -0.18
SNRPA1-203ENST00000540017 ZNF114Q8NC26 417 aa13.91□□□□□ -0.18
SNRPA1-203ENST00000540017 SCARB1Q8WTV0 552 aa13.91□□□□□ -0.18
SNRPA1-203ENST00000540017 PLEKHA3Q9HB20 300 aa13.91□□□□□ -0.18
SNRPA1-203ENST00000540017 LINC00854A0A1B0GVQ3 168 aa13.9□□□□□ -0.18
SNRPA1-203ENST00000540017 CYB5BO43169 146 aa13.9□□□□□ -0.18
SNRPA1-203ENST00000540017 TRIQKQ629K1 86 aa13.9□□□□□ -0.18
SNRPA1-203ENST00000540017 GPHB5Q86YW7 130 aa13.9□□□□□ -0.18
SNRPA1-203ENST00000540017 IL22RA2Q969J5 263 aa13.9□□□□□ -0.18
SNRPA1-203ENST00000540017 SLC25A21Q9BQT8 299 aaPredicted RBP13.9□□□□□ -0.18
SNRPA1-203ENST00000540017 SIGLEC8Q9NYZ4 499 aa13.9□□□□□ -0.18
SNRPA1-203ENST00000540017 CACNG5Q9UF02 275 aa13.9□□□□□ -0.18
SNRPA1-203ENST00000540017 SORL1Q92673 2214 aa13.89□□□□□ -0.19
SNRPA1-203ENST00000540017 IGHV3-35A0A0C4DH35 117 aa13.89□□□□□ -0.19
SNRPA1-203ENST00000540017 OR2T8A6NH00 312 aa13.89□□□□□ -0.19
SNRPA1-203ENST00000540017 INS-IGF2F8WCM5 200 aa13.89□□□□□ -0.19
SNRPA1-203ENST00000540017 I3L2K1 104 aa13.89□□□□□ -0.19
SNRPA1-203ENST00000540017 IL7P13232 177 aa13.89□□□□□ -0.19
SNRPA1-203ENST00000540017 ERHP84090 104 aaKnown RBP13.89□□□□□ -0.19
SNRPA1-203ENST00000540017 LYZL2Q7Z4W2 148 aa13.89□□□□□ -0.19
SNRPA1-203ENST00000540017 OR1L6Q8NGR2 347 aa13.89□□□□□ -0.19
SNRPA1-203ENST00000540017 MISP3Q96FF7 219 aa13.89□□□□□ -0.19
SNRPA1-203ENST00000540017 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.89□□□□□ -0.19
SNRPA1-203ENST00000540017 C21orf62Q9NYP8 219 aa13.89□□□□□ -0.19
SNRPA1-203ENST00000540017 PEMTQ9UBM1 199 aa13.89□□□□□ -0.19
SNRPA1-203ENST00000540017 DNAH9Q9NYC9 4486 aa13.88□□□□□ -0.19
SNRPA1-203ENST00000540017 IZUMO1RA6ND01 250 aa13.88□□□□□ -0.19
SNRPA1-203ENST00000540017 LGALS9O00182 355 aa13.88□□□□□ -0.19
SNRPA1-203ENST00000540017 TGOLN2O43493 480 aa13.88□□□□□ -0.19
SNRPA1-203ENST00000540017 IGHV3-48P01763 117 aa13.88□□□□□ -0.19
SNRPA1-203ENST00000540017 GP9P14770 177 aa13.88□□□□□ -0.19
SNRPA1-203ENST00000540017 BTCP35070 178 aa13.88□□□□□ -0.19
SNRPA1-203ENST00000540017 INPP1P49441 399 aa13.88□□□□□ -0.19
SNRPA1-203ENST00000540017 CNPY1Q3B7I2 92 aa13.88□□□□□ -0.19
SNRPA1-203ENST00000540017 TMEM128Q5BJH2 165 aa13.88□□□□□ -0.19
SNRPA1-203ENST00000540017 UNQ9165/PRO28630Q6UXU0 137 aa13.88□□□□□ -0.19
SNRPA1-203ENST00000540017 CHRDL1Q9BU40 450 aa13.88□□□□□ -0.19
SNRPA1-203ENST00000540017 PDCD10Q9BUL8 212 aa13.88□□□□□ -0.19
SNRPA1-203ENST00000540017 C2orf70A6NJV1 201 aa13.87□□□□□ -0.19
SNRPA1-203ENST00000540017 RNASE2P10153 161 aaKnown RBP13.87□□□□□ -0.19
SNRPA1-203ENST00000540017 ADMP35318 185 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms