RNA–Protein interactions for RNA: ENST00000539372.5

TNFRSF1A-212, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,063 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-212ENST00000539372 OR4A16Q8NH70 328 aa14.31□□□□□ -0.12
TNFRSF1A-212ENST00000539372 SCARB1Q8WTV0 552 aa14.31□□□□□ -0.12
TNFRSF1A-212ENST00000539372 TMEM56Q96MV1 263 aa14.31□□□□□ -0.12
TNFRSF1A-212ENST00000539372 TSC22D3Q99576 134 aa14.31□□□□□ -0.12
TNFRSF1A-212ENST00000539372 FAM110AQ9BQ89 295 aa14.31□□□□□ -0.12
TNFRSF1A-212ENST00000539372 FAM212BQ9NTI7 297 aaPredicted RBP14.31□□□□□ -0.12
TNFRSF1A-212ENST00000539372 C21orf62Q9NYP8 219 aa14.31□□□□□ -0.12
TNFRSF1A-212ENST00000539372 UFC1Q9Y3C8 167 aa14.31□□□□□ -0.12
TNFRSF1A-212ENST00000539372 K7EIM0 57 aa14.3□□□□□ -0.12
TNFRSF1A-212ENST00000539372 CD3DP04234 171 aa14.3□□□□□ -0.12
TNFRSF1A-212ENST00000539372 C8orf88P0DMB2 117 aa14.3□□□□□ -0.12
TNFRSF1A-212ENST00000539372 RNASE10Q5GAN6 216 aaKnown RBP14.3□□□□□ -0.12
TNFRSF1A-212ENST00000539372 OR52B4Q8NGK2 314 aa14.3□□□□□ -0.12
TNFRSF1A-212ENST00000539372 TMEM190Q8WZ59 177 aa14.3□□□□□ -0.12
TNFRSF1A-212ENST00000539372 BSCL2Q96G97 398 aaPredicted RBP14.3□□□□□ -0.12
TNFRSF1A-212ENST00000539372 ABHD1Q96SE0 405 aa14.3□□□□□ -0.12
TNFRSF1A-212ENST00000539372 CHRDL1Q9BU40 450 aa14.3□□□□□ -0.12
TNFRSF1A-212ENST00000539372 MRPS26Q9BYN8 205 aaKnown RBP14.3□□□□□ -0.12
TNFRSF1A-212ENST00000539372 HIPK2Q9H2X6 1198 aa14.3□□□□□ -0.12
TNFRSF1A-212ENST00000539372 IGHV3OR16-8A0A075B7F1 116 aa14.29□□□□□ -0.12
TNFRSF1A-212ENST00000539372 F8W735 103 aaPredicted RBP14.29□□□□□ -0.12
TNFRSF1A-212ENST00000539372 IZUMO4Q1ZYL8 232 aa14.29□□□□□ -0.12
TNFRSF1A-212ENST00000539372 Q56UQ5 140 aa14.29□□□□□ -0.12
TNFRSF1A-212ENST00000539372 GPR141Q7Z602 305 aa14.29□□□□□ -0.12
TNFRSF1A-212ENST00000539372 OR4D10Q8NGI6 311 aa14.29□□□□□ -0.12
TNFRSF1A-212ENST00000539372 MARC2Q969Z3 335 aa14.29□□□□□ -0.12
TNFRSF1A-212ENST00000539372 MRPL27Q9P0M9 148 aaKnown RBP14.29□□□□□ -0.12
TNFRSF1A-212ENST00000539372 MTFP1Q9UDX5 166 aa14.29□□□□□ -0.12
TNFRSF1A-212ENST00000539372 PPP5CP53041 499 aa14.28□□□□□ -0.12
TNFRSF1A-212ENST00000539372 ELLP55199 621 aaPredicted RBP14.28□□□□□ -0.12
TNFRSF1A-212ENST00000539372 PIGPP57054 158 aa14.28□□□□□ -0.12
TNFRSF1A-212ENST00000539372 RBPMS2Q6ZRY4 209 aaKnown RBP14.28□□□□□ -0.12
TNFRSF1A-212ENST00000539372 LHFPL1Q86WI0 220 aa14.28□□□□□ -0.12
TNFRSF1A-212ENST00000539372 OR2C3Q8N628 320 aa14.28□□□□□ -0.12
TNFRSF1A-212ENST00000539372 OR1L6Q8NGR2 347 aa14.28□□□□□ -0.12
TNFRSF1A-212ENST00000539372 OR1P1Q8NH06 330 aa14.28□□□□□ -0.12
TNFRSF1A-212ENST00000539372 MISP3Q96FF7 219 aa14.28□□□□□ -0.12
TNFRSF1A-212ENST00000539372 C20orf24Q9BUV8 137 aa14.28□□□□□ -0.12
TNFRSF1A-212ENST00000539372 GAR1Q9NY12 217 aaKnown RBP14.28□□□□□ -0.12
TNFRSF1A-212ENST00000539372 ZNF207O43670 478 aaKnown RBP14.27□□□□□ -0.13
TNFRSF1A-212ENST00000539372 ADMP35318 185 aa14.27□□□□□ -0.13
TNFRSF1A-212ENST00000539372 ALDH3B2P48448 385 aa14.27□□□□□ -0.13
TNFRSF1A-212ENST00000539372 RND3P61587 244 aa14.27□□□□□ -0.13
TNFRSF1A-212ENST00000539372 SPCS2Q15005 226 aa14.27□□□□□ -0.13
TNFRSF1A-212ENST00000539372 SPINK9Q5DT21 86 aa14.27□□□□□ -0.13
TNFRSF1A-212ENST00000539372 SPSB3Q6PJ21 355 aa14.27□□□□□ -0.13
TNFRSF1A-212ENST00000539372 ARRDC1Q8N5I2 433 aa14.27□□□□□ -0.13
TNFRSF1A-212ENST00000539372 TP53RKQ96S44 253 aa14.27□□□□□ -0.13
TNFRSF1A-212ENST00000539372 MIXL1Q9H2W2 232 aa14.27□□□□□ -0.13
TNFRSF1A-212ENST00000539372 DAZ1Q9NQZ3 744 aaKnown RBP14.27□□□□□ -0.13
TNFRSF1A-212ENST00000539372 TRAV25A0A0B4J276 109 aa14.26□□□□□ -0.13
TNFRSF1A-212ENST00000539372 NDUFA4O00483 81 aa14.26□□□□□ -0.13
TNFRSF1A-212ENST00000539372 RGS5O15539 181 aa14.26□□□□□ -0.13
TNFRSF1A-212ENST00000539372 TBPP20226 339 aa14.26□□□□□ -0.13
TNFRSF1A-212ENST00000539372 PRCDQ00LT1 54 aa14.26□□□□□ -0.13
TNFRSF1A-212ENST00000539372 ANKRD55Q3KP44 614 aa14.26□□□□□ -0.13
TNFRSF1A-212ENST00000539372 SCGB2B2Q4G0G5 96 aa14.26□□□□□ -0.13
TNFRSF1A-212ENST00000539372 ZNF486Q96H40 463 aaPredicted RBP14.26□□□□□ -0.13
TNFRSF1A-212ENST00000539372 CTDSP2O14595 271 aa14.25□□□□□ -0.13
TNFRSF1A-212ENST00000539372 IGKV1-5P01602 117 aa14.25□□□□□ -0.13
TNFRSF1A-212ENST00000539372 IGHV3-48P01763 117 aa14.25□□□□□ -0.13
TNFRSF1A-212ENST00000539372 HSPE1P61604 102 aaKnown RBP14.25□□□□□ -0.13
TNFRSF1A-212ENST00000539372 TMEM229BQ8NBD8 167 aa14.25□□□□□ -0.13
TNFRSF1A-212ENST00000539372 C15orf40Q8WUR7 153 aa14.25□□□□□ -0.13
TNFRSF1A-212ENST00000539372 ATP6V0BQ99437 205 aa14.25□□□□□ -0.13
TNFRSF1A-212ENST00000539372 C5orf66Q9H5L9 145 aa14.25□□□□□ -0.13
TNFRSF1A-212ENST00000539372 C3orf85A0A1B0GTC6 90 aa14.24□□□□□ -0.13
TNFRSF1A-212ENST00000539372 I3L2K1 104 aa14.24□□□□□ -0.13
TNFRSF1A-212ENST00000539372 RAB3DO95716 219 aa14.24□□□□□ -0.13
TNFRSF1A-212ENST00000539372 CD74P04233 296 aa14.24□□□□□ -0.13
TNFRSF1A-212ENST00000539372 CTSGP08311 255 aa14.24□□□□□ -0.13
TNFRSF1A-212ENST00000539372 TAS2R19P59542 299 aa14.24□□□□□ -0.13
TNFRSF1A-212ENST00000539372 SP6Q3SY56 376 aa14.24□□□□□ -0.13
TNFRSF1A-212ENST00000539372 FAAP20Q6NZ36 180 aa14.24□□□□□ -0.13
TNFRSF1A-212ENST00000539372 CLVS1Q8IUQ0 354 aaPredicted RBP14.24□□□□□ -0.13
TNFRSF1A-212ENST00000539372 OR13C8Q8NGS7 320 aa14.24□□□□□ -0.13
TNFRSF1A-212ENST00000539372 TERB2Q8NHR7 220 aa14.24□□□□□ -0.13
TNFRSF1A-212ENST00000539372 PINX1Q96BK5 328 aaKnown RBP14.24□□□□□ -0.13
TNFRSF1A-212ENST00000539372 COPZ2Q9P299 210 aa14.24□□□□□ -0.13
TNFRSF1A-212ENST00000539372 UBQLN2Q9UHD9 624 aa14.24□□□□□ -0.13
TNFRSF1A-212ENST00000539372 GABARAPH6UMI1 98 aa14.23□□□□□ -0.13
TNFRSF1A-212ENST00000539372 MT-CO2P00403 227 aa14.23□□□□□ -0.13
TNFRSF1A-212ENST00000539372 AKR1C2P52895 323 aa14.23□□□□□ -0.13
TNFRSF1A-212ENST00000539372 ERHP84090 104 aaKnown RBP14.23□□□□□ -0.13
TNFRSF1A-212ENST00000539372 TRIM16LQ309B1 348 aa14.23□□□□□ -0.13
TNFRSF1A-212ENST00000539372 STEAP1BQ6NZ63 245 aa14.23□□□□□ -0.13
TNFRSF1A-212ENST00000539372 ZNF114Q8NC26 417 aa14.23□□□□□ -0.13
TNFRSF1A-212ENST00000539372 ZFAND1Q8TCF1 268 aa14.23□□□□□ -0.13
TNFRSF1A-212ENST00000539372 MARCH1Q8TCQ1 289 aa14.23□□□□□ -0.13
TNFRSF1A-212ENST00000539372 ZNF414Q96IQ9 312 aa14.23□□□□□ -0.13
TNFRSF1A-212ENST00000539372 GGTLC1Q9BX51 225 aa14.23□□□□□ -0.13
TNFRSF1A-212ENST00000539372 TENM2Q9NT68 2774 aa14.22□□□□□ -0.13
TNFRSF1A-212ENST00000539372 A0A0B4J293 547 aa14.22□□□□□ -0.13
TNFRSF1A-212ENST00000539372 NUPL2O15504 423 aaKnown RBP14.22□□□□□ -0.13
TNFRSF1A-212ENST00000539372 P0C879 139 aa14.22□□□□□ -0.13
TNFRSF1A-212ENST00000539372 MFAP4P55083 255 aa14.22□□□□□ -0.13
TNFRSF1A-212ENST00000539372 CCDC71LQ8N9Z2 235 aa14.22□□□□□ -0.13
TNFRSF1A-212ENST00000539372 SPAG8Q99932 426 aaPredicted RBP14.22□□□□□ -0.13
TNFRSF1A-212ENST00000539372 DYNC2H1Q8NCM8 4307 aaKnown RBP14.22□□□□□ -0.13
TNFRSF1A-212ENST00000539372 CSMD3Q7Z407 3707 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms