RNA–Protein interactions for RNA: ENST00000538862.6

CDCA3-207, Transcript of cell division cycle associated 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA3, Length 1,943 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-207ENST00000538862 IGHV3-7P01780 117 aa11.93□□□□□ -0.5
CDCA3-207ENST00000538862 AMBPP02760 352 aa11.93□□□□□ -0.5
CDCA3-207ENST00000538862 RD3LP0DJH9 198 aa11.93□□□□□ -0.5
CDCA3-207ENST00000538862 CHRNA7P36544 502 aa11.93□□□□□ -0.5
CDCA3-207ENST00000538862 PKIAP61925 76 aa11.93□□□□□ -0.5
CDCA3-207ENST00000538862 GAMTQ14353 236 aa11.93□□□□□ -0.5
CDCA3-207ENST00000538862 POU2AF1Q16633 256 aa11.93□□□□□ -0.5
CDCA3-207ENST00000538862 OR4A47Q6IF82 309 aa11.93□□□□□ -0.5
CDCA3-207ENST00000538862 TEPPQ6URK8 271 aa11.93□□□□□ -0.5
CDCA3-207ENST00000538862 SLC24A4Q8NFF2 622 aa11.93□□□□□ -0.5
CDCA3-207ENST00000538862 C1orf159Q96HA4 380 aa11.93□□□□□ -0.5
CDCA3-207ENST00000538862 TMEM204Q9BSN7 226 aa11.93□□□□□ -0.5
CDCA3-207ENST00000538862 RNF7Q9UBF6 113 aa11.93□□□□□ -0.5
CDCA3-207ENST00000538862 DSCAML1Q8TD84 2053 aa11.93□□□□□ -0.5
CDCA3-207ENST00000538862 PKDREJQ9NTG1 2253 aa11.92□□□□□ -0.5
CDCA3-207ENST00000538862 DSCAMO60469 2012 aa11.92□□□□□ -0.5
CDCA3-207ENST00000538862 SAA2-SAA4A0A096LPE2 208 aa11.92□□□□□ -0.5
CDCA3-207ENST00000538862 TRGV10A0A0A0MS01 117 aa11.92□□□□□ -0.5
CDCA3-207ENST00000538862 SAA2P0DJI9 122 aaPredicted RBP11.92□□□□□ -0.5
CDCA3-207ENST00000538862 NPY1RP25929 384 aa11.92□□□□□ -0.5
CDCA3-207ENST00000538862 RAB31Q13636 194 aa11.92□□□□□ -0.5
CDCA3-207ENST00000538862 TMEM30BQ3MIR4 351 aa11.92□□□□□ -0.5
CDCA3-207ENST00000538862 TMEM144Q7Z5S9 345 aa11.92□□□□□ -0.5
CDCA3-207ENST00000538862 LINC00574Q9H8X3 128 aa11.92□□□□□ -0.5
CDCA3-207ENST00000538862 ENY2Q9NPA8 101 aa11.92□□□□□ -0.5
CDCA3-207ENST00000538862 IL6RP08887 468 aaPredicted RBP11.92□□□□□ -0.5
CDCA3-207ENST00000538862 RPL29P47914 159 aaKnown RBP11.92□□□□□ -0.5
CDCA3-207ENST00000538862 SELENOVP59797 346 aa11.92□□□□□ -0.5
CDCA3-207ENST00000538862 MRPS11P82912 194 aaKnown RBP11.92□□□□□ -0.5
CDCA3-207ENST00000538862 CLEC12BQ2HXU8 276 aa11.92□□□□□ -0.5
CDCA3-207ENST00000538862 ARSJQ5FYB0 599 aaPredicted RBP11.92□□□□□ -0.5
CDCA3-207ENST00000538862 FAM78BQ5VT40 261 aa11.92□□□□□ -0.5
CDCA3-207ENST00000538862 ZNF439Q8NDP4 499 aa11.92□□□□□ -0.5
CDCA3-207ENST00000538862 OR5T1Q8NG75 326 aa11.92□□□□□ -0.5
CDCA3-207ENST00000538862 CORO2AQ92828 525 aa11.92□□□□□ -0.5
CDCA3-207ENST00000538862 VKORC1Q9BQB6 163 aa11.92□□□□□ -0.5
CDCA3-207ENST00000538862 DERL1Q9BUN8 251 aa11.92□□□□□ -0.5
CDCA3-207ENST00000538862 IL19Q9UHD0 177 aa11.92□□□□□ -0.5
CDCA3-207ENST00000538862 FUT9Q9Y231 359 aa11.92□□□□□ -0.5
CDCA3-207ENST00000538862 TANC2Q9HCD6 1990 aa11.91□□□□□ -0.5
CDCA3-207ENST00000538862 NOTCH2Q04721 2471 aa11.91□□□□□ -0.5
CDCA3-207ENST00000538862 TSTD3H0UI37 97 aa11.91□□□□□ -0.5
CDCA3-207ENST00000538862 IL3RAP26951 378 aa11.91□□□□□ -0.5
CDCA3-207ENST00000538862 GRNP28799 593 aaKnown RBP11.91□□□□□ -0.5
CDCA3-207ENST00000538862 RHOBP62745 196 aa11.91□□□□□ -0.5
CDCA3-207ENST00000538862 STUMQ69YW2 141 aa11.91□□□□□ -0.5
CDCA3-207ENST00000538862 TMEM37Q8WXS4 190 aa11.91□□□□□ -0.5
CDCA3-207ENST00000538862 SFRP2Q96HF1 295 aa11.91□□□□□ -0.5
CDCA3-207ENST00000538862 IDI2-AS1Q9NZ38 188 aa11.91□□□□□ -0.5
CDCA3-207ENST00000538862 ITPR2Q14571 2701 aa11.91□□□□□ -0.5
CDCA3-207ENST00000538862 MDFIC2A0A1B0GVS7 189 aa11.9□□□□□ -0.5
CDCA3-207ENST00000538862 MT-CO2P00403 227 aa11.9□□□□□ -0.5
CDCA3-207ENST00000538862 GCGP01275 180 aa11.9□□□□□ -0.5
CDCA3-207ENST00000538862 TIMP3P35625 211 aa11.9□□□□□ -0.5
CDCA3-207ENST00000538862 RPL15P61313 204 aaKnown RBP11.9□□□□□ -0.5
CDCA3-207ENST00000538862 UTF1Q5T230 341 aa11.9□□□□□ -0.5
CDCA3-207ENST00000538862 C1orf185Q5T7R7 199 aa11.9□□□□□ -0.5
CDCA3-207ENST00000538862 VHLLQ6RSH7 139 aa11.9□□□□□ -0.5
CDCA3-207ENST00000538862 SFXN3Q9BWM7 321 aa11.9□□□□□ -0.5
CDCA3-207ENST00000538862 GCM1Q9NP62 436 aa11.9□□□□□ -0.5
CDCA3-207ENST00000538862 PRNDQ9UKY0 176 aa11.9□□□□□ -0.5
CDCA3-207ENST00000538862 ZNF257Q9Y2Q1 563 aa11.9□□□□□ -0.5
CDCA3-207ENST00000538862 FAM215AQ9Y5M1 114 aa11.9□□□□□ -0.5
CDCA3-207ENST00000538862 CA2P00918 260 aa11.9□□□□□ -0.51
CDCA3-207ENST00000538862 GCHFRP30047 84 aa11.9□□□□□ -0.51
CDCA3-207ENST00000538862 CNN1P51911 297 aaKnown RBP11.9□□□□□ -0.51
CDCA3-207ENST00000538862 ATP5IP56385 69 aaPredicted RBP11.9□□□□□ -0.51
CDCA3-207ENST00000538862 EFNB3Q15768 340 aa11.9□□□□□ -0.51
CDCA3-207ENST00000538862 FAM201AQ5SY85 155 aa11.9□□□□□ -0.51
CDCA3-207ENST00000538862 LYG1Q8N1E2 194 aa11.9□□□□□ -0.51
CDCA3-207ENST00000538862 STPG3Q8N7X2 389 aa11.9□□□□□ -0.51
CDCA3-207ENST00000538862 SSMEM1Q8WWF3 244 aa11.9□□□□□ -0.51
CDCA3-207ENST00000538862 NEUROG1Q92886 237 aa11.9□□□□□ -0.51
CDCA3-207ENST00000538862 LEAP2Q969E1 77 aa11.9□□□□□ -0.51
CDCA3-207ENST00000538862 A0A0U1RQK1 487 aa11.89□□□□□ -0.51
CDCA3-207ENST00000538862 ZNF320A2RRD8 509 aa11.89□□□□□ -0.51
CDCA3-207ENST00000538862 GZMBP10144 247 aa11.89□□□□□ -0.51
CDCA3-207ENST00000538862 BMP5P22003 454 aa11.89□□□□□ -0.51
CDCA3-207ENST00000538862 TNFAIP6P98066 277 aaPredicted RBP11.89□□□□□ -0.51
CDCA3-207ENST00000538862 MAJINQ3KP22 176 aa11.89□□□□□ -0.51
CDCA3-207ENST00000538862 ZNF114Q8NC26 417 aa11.89□□□□□ -0.51
CDCA3-207ENST00000538862 GAFA1Q96PS6 74 aa11.89□□□□□ -0.51
CDCA3-207ENST00000538862 OR51B2Q9Y5P1 312 aa11.89□□□□□ -0.51
CDCA3-207ENST00000538862 ARL2-SNX15V9GYD0 113 aa11.89□□□□□ -0.51
CDCA3-207ENST00000538862 TRBV20OR9-2A0A075B6H5 130 aa11.88□□□□□ -0.51
CDCA3-207ENST00000538862 SCO2A0A1W2PP80 73 aa11.88□□□□□ -0.51
CDCA3-207ENST00000538862 TNFSF4P23510 183 aa11.88□□□□□ -0.51
CDCA3-207ENST00000538862 GNG10P50151 68 aa11.88□□□□□ -0.51
CDCA3-207ENST00000538862 NUTF2P61970 127 aaKnown RBP11.88□□□□□ -0.51
CDCA3-207ENST00000538862 PRR20EP86478 221 aa11.88□□□□□ -0.51
CDCA3-207ENST00000538862 PRR20CP86479 221 aa11.88□□□□□ -0.51
CDCA3-207ENST00000538862 PRR20DP86480 221 aa11.88□□□□□ -0.51
CDCA3-207ENST00000538862 PRR20BP86481 221 aa11.88□□□□□ -0.51
CDCA3-207ENST00000538862 PRR20AP86496 221 aa11.88□□□□□ -0.51
CDCA3-207ENST00000538862 ZNF788Q6ZQV5 615 aa11.88□□□□□ -0.51
CDCA3-207ENST00000538862 TCF23Q7RTU1 214 aa11.88□□□□□ -0.51
CDCA3-207ENST00000538862 SGMS2Q8NHU3 365 aa11.88□□□□□ -0.51
CDCA3-207ENST00000538862 C11orf52Q96A22 123 aa11.88□□□□□ -0.51
CDCA3-207ENST00000538862 TMEM18Q96B42 140 aa11.88□□□□□ -0.51
CDCA3-207ENST00000538862 SEPSECSQ9HD40 501 aaKnown RBP11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms