RNA–Protein interactions for RNA: ENST00000538827.5

CD4-208, Transcript of CD4 molecule, humanhuman

TSL 1 (best)

Gene CD4, Length 985 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-208ENST00000538827 MFFQ9GZY8 342 aa11.19□□□□□ -0.62
CD4-208ENST00000538827 LYRM2Q9NU23 88 aaPredicted RBP11.19□□□□□ -0.62
CD4-208ENST00000538827 TNFSF18Q9UNG2 199 aa11.19□□□□□ -0.62
CD4-208ENST00000538827 STRAPQ9Y3F4 350 aaKnown RBP11.19□□□□□ -0.62
CD4-208ENST00000538827 WSB1Q9Y6I7 421 aa11.19□□□□□ -0.62
CD4-208ENST00000538827 AMY1AP04745 511 aa11.18□□□□□ -0.62
CD4-208ENST00000538827 METTL15P1P0C7V9 234 aa11.18□□□□□ -0.62
CD4-208ENST00000538827 AREGP15514 252 aa11.18□□□□□ -0.62
CD4-208ENST00000538827 NPY1RP25929 384 aa11.18□□□□□ -0.62
CD4-208ENST00000538827 SNCAP37840 140 aa11.18□□□□□ -0.62
CD4-208ENST00000538827 PAX9P55771 341 aa11.18□□□□□ -0.62
CD4-208ENST00000538827 TAS2R30P59541 319 aa11.18□□□□□ -0.62
CD4-208ENST00000538827 RPP30P78346 268 aaKnown RBP11.18□□□□□ -0.62
CD4-208ENST00000538827 EWSR1Q01844 656 aaKnown RBP eCLIP11.18□□□□□ -0.62
CD4-208ENST00000538827 ZNF562Q6V9R5 426 aa11.18□□□□□ -0.62
CD4-208ENST00000538827 SLC35E3Q7Z769 313 aa11.18□□□□□ -0.62
CD4-208ENST00000538827 SLC25A31Q9H0C2 315 aa11.18□□□□□ -0.62
CD4-208ENST00000538827 FBXO7Q9Y3I1 522 aa11.18□□□□□ -0.62
CD4-208ENST00000538827 IGLC7A0M8Q6 106 aa11.17□□□□□ -0.62
CD4-208ENST00000538827 RNF222A6NCQ9 220 aa11.17□□□□□ -0.62
CD4-208ENST00000538827 LY86O95711 162 aa11.17□□□□□ -0.62
CD4-208ENST00000538827 HKR1P10072 659 aa11.17□□□□□ -0.62
CD4-208ENST00000538827 WT1-ASQ06250 92 aa11.17□□□□□ -0.62
CD4-208ENST00000538827 OR8G2PQ6IF36 304 aa11.17□□□□□ -0.62
CD4-208ENST00000538827 UNQ5815/PRO19632Q6UWF5 114 aa11.17□□□□□ -0.62
CD4-208ENST00000538827 C19orf35Q6ZS72 473 aa11.17□□□□□ -0.62
CD4-208ENST00000538827 STX12Q86Y82 276 aa11.17□□□□□ -0.62
CD4-208ENST00000538827 TMEM252Q8N6L7 170 aa11.17□□□□□ -0.62
CD4-208ENST00000538827 SMIM3Q9BZL3 60 aa11.17□□□□□ -0.62
CD4-208ENST00000538827 NPFFR1Q9GZQ6 430 aa11.17□□□□□ -0.62
CD4-208ENST00000538827 ESM1Q9NQ30 184 aa11.17□□□□□ -0.62
CD4-208ENST00000538827 C15orf62A8K5M9 175 aa11.16□□□□□ -0.62
CD4-208ENST00000538827 HMSDA8MTL9 139 aa11.16□□□□□ -0.62
CD4-208ENST00000538827 CST7O76096 145 aa11.16□□□□□ -0.62
CD4-208ENST00000538827 FAM157CP0CG43 387 aa11.16□□□□□ -0.62
CD4-208ENST00000538827 CXCL2P19875 107 aa11.16□□□□□ -0.62
CD4-208ENST00000538827 HTR2BP41595 481 aa11.16□□□□□ -0.62
CD4-208ENST00000538827 RAB11AP62491 216 aa11.16□□□□□ -0.62
CD4-208ENST00000538827 BLCAPP62952 87 aa11.16□□□□□ -0.62
CD4-208ENST00000538827 TUSC1Q2TAM9 212 aa11.16□□□□□ -0.62
CD4-208ENST00000538827 KRTAP24-1Q3LI83 254 aa11.16□□□□□ -0.62
CD4-208ENST00000538827 TMEM65Q6PI78 240 aa11.16□□□□□ -0.62
CD4-208ENST00000538827 ACOT7LQ6ZUV0 252 aa11.16□□□□□ -0.62
CD4-208ENST00000538827 HSD17B13Q7Z5P4 300 aaPredicted RBP11.16□□□□□ -0.62
CD4-208ENST00000538827 C9orf62Q8N4C0 152 aa11.16□□□□□ -0.62
CD4-208ENST00000538827 TMEM217Q8N7C4 229 aa11.16□□□□□ -0.62
CD4-208ENST00000538827 LFNGQ8NES3 379 aa11.16□□□□□ -0.62
CD4-208ENST00000538827 AQP10Q96PS8 301 aa11.16□□□□□ -0.62
CD4-208ENST00000538827 HSPB11Q9Y547 144 aa11.16□□□□□ -0.62
CD4-208ENST00000538827 LINC01548A6NM66 108 aa11.15□□□□□ -0.62
CD4-208ENST00000538827 TRIM77I1YAP6 450 aa11.15□□□□□ -0.62
CD4-208ENST00000538827 IFNA4P05014 189 aa11.15□□□□□ -0.62
CD4-208ENST00000538827 RNASE2P10153 161 aaKnown RBP11.15□□□□□ -0.62
CD4-208ENST00000538827 OR2F1Q13607 317 aa11.15□□□□□ -0.62
CD4-208ENST00000538827 TMEM95Q3KNT9 176 aa11.15□□□□□ -0.62
CD4-208ENST00000538827 LILRB2Q8N423 598 aa11.15□□□□□ -0.62
CD4-208ENST00000538827 SGMS2Q8NHU3 365 aa11.15□□□□□ -0.62
CD4-208ENST00000538827 JMJD8Q96S16 334 aa11.15□□□□□ -0.62
CD4-208ENST00000538827 P2RX4Q99571 388 aa11.15□□□□□ -0.62
CD4-208ENST00000538827 SRSF8Q9BRL6 282 aaKnown RBP11.15□□□□□ -0.62
CD4-208ENST00000538827 C19orf24Q9BVV8 132 aa11.15□□□□□ -0.62
CD4-208ENST00000538827 PRSS22Q9GZN4 317 aa11.15□□□□□ -0.62
CD4-208ENST00000538827 ARL6Q9H0F7 186 aa11.15□□□□□ -0.62
CD4-208ENST00000538827 LINC00527Q9UJ94 153 aa11.15□□□□□ -0.62
CD4-208ENST00000538827 U3KQ87 197 aa11.15□□□□□ -0.62
CD4-208ENST00000538827 SVEP1Q4LDE5 3571 aa11.15□□□□□ -0.63
CD4-208ENST00000538827 KANTRA0A1W2PQU2 76 aa11.14□□□□□ -0.63
CD4-208ENST00000538827 EGR2P11161 476 aaPredicted RBP11.14□□□□□ -0.63
CD4-208ENST00000538827 DEFA4P12838 97 aa11.14□□□□□ -0.63
CD4-208ENST00000538827 SULT1A1P50225 295 aa11.14□□□□□ -0.63
CD4-208ENST00000538827 SUB1P53999 127 aaKnown RBP eCLIP11.14□□□□□ -0.63
CD4-208ENST00000538827 HILS1P60008 231 aa11.14□□□□□ -0.63
CD4-208ENST00000538827 NHLH2Q02577 135 aa11.14□□□□□ -0.63
CD4-208ENST00000538827 BAXQ07812 192 aa11.14□□□□□ -0.63
CD4-208ENST00000538827 SLC38A11Q08AI6 406 aa11.14□□□□□ -0.63
CD4-208ENST00000538827 ZNF345Q14585 488 aa11.14□□□□□ -0.63
CD4-208ENST00000538827 CLINT1Q14677 625 aa11.14□□□□□ -0.63
CD4-208ENST00000538827 ASPHD1Q5U4P2 390 aa11.14□□□□□ -0.63
CD4-208ENST00000538827 TMEM14EPQ6UXP3 125 aa11.14□□□□□ -0.63
CD4-208ENST00000538827 ETV3LQ6ZN32 361 aa11.14□□□□□ -0.63
CD4-208ENST00000538827 Q6ZS46 218 aa11.14□□□□□ -0.63
CD4-208ENST00000538827 TMUB2Q71RG4 321 aa11.14□□□□□ -0.63
CD4-208ENST00000538827 OR5T1Q8NG75 326 aa11.14□□□□□ -0.63
CD4-208ENST00000538827 OR1S2Q8NGQ3 325 aa11.14□□□□□ -0.63
CD4-208ENST00000538827 MISP3Q96FF7 219 aa11.14□□□□□ -0.63
CD4-208ENST00000538827 BSCL2Q96G97 398 aaPredicted RBP11.14□□□□□ -0.63
CD4-208ENST00000538827 FBXL17Q9UF56 701 aa11.14□□□□□ -0.63
CD4-208ENST00000538827 BOLA1Q9Y3E2 137 aa11.14□□□□□ -0.63
CD4-208ENST00000538827 TRAV41A0A0B4J266 112 aa11.13□□□□□ -0.63
CD4-208ENST00000538827 A0A0D9SG52 128 aa11.13□□□□□ -0.63
CD4-208ENST00000538827 INS-IGF2F8WCM5 200 aa11.13□□□□□ -0.63
CD4-208ENST00000538827 G3V318 75 aa11.13□□□□□ -0.63
CD4-208ENST00000538827 IGHG2P01859 326 aa11.13□□□□□ -0.63
CD4-208ENST00000538827 CRYBA1P05813 215 aa11.13□□□□□ -0.63
CD4-208ENST00000538827 UBA52P62987 128 aaKnown RBP11.13□□□□□ -0.63
CD4-208ENST00000538827 HBG1P69891 147 aa11.13□□□□□ -0.63
CD4-208ENST00000538827 HBG2P69892 147 aa11.13□□□□□ -0.63
CD4-208ENST00000538827 LGALSLQ3ZCW2 172 aaPredicted RBP11.13□□□□□ -0.63
CD4-208ENST00000538827 C2orf83Q53S99 150 aa11.13□□□□□ -0.63
CD4-208ENST00000538827 HAPLN4Q86UW8 402 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms