RNA–Protein interactions for RNA: ENST00000537002.5

PTPRD-213, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 8,224 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-213ENST00000537002 J3KRW8 73 aa4.54□□□□□ -1.68
PTPRD-213ENST00000537002 SNCGO76070 127 aa4.54□□□□□ -1.68
PTPRD-213ENST00000537002 IL4P05112 153 aa4.54□□□□□ -1.68
PTPRD-213ENST00000537002 SSTR5P35346 364 aa4.54□□□□□ -1.68
PTPRD-213ENST00000537002 UCNP55089 124 aa4.54□□□□□ -1.68
PTPRD-213ENST00000537002 CEACAM21Q3KPI0 293 aa4.54□□□□□ -1.68
PTPRD-213ENST00000537002 MOB3BQ86TA1 216 aa4.54□□□□□ -1.68
PTPRD-213ENST00000537002 OR2K2Q8NGT1 345 aa4.54□□□□□ -1.68
PTPRD-213ENST00000537002 SPANXDQ9BXN6 97 aa4.54□□□□□ -1.68
PTPRD-213ENST00000537002 TRAV8-6A0A0B4J262 113 aa4.54□□□□□ -1.68
PTPRD-213ENST00000537002 MUC21A0A0G2JKD1 596 aa4.54□□□□□ -1.68
PTPRD-213ENST00000537002 MUC21A0A140T8X8 626 aa4.54□□□□□ -1.68
PTPRD-213ENST00000537002 RPL8P62917 257 aaKnown RBP4.54□□□□□ -1.68
PTPRD-213ENST00000537002 MUC21Q5SSG8 566 aa4.54□□□□□ -1.68
PTPRD-213ENST00000537002 RPP25LQ8N5L8 163 aaKnown RBP4.54□□□□□ -1.68
PTPRD-213ENST00000537002 Q8NFD4 153 aa4.54□□□□□ -1.68
PTPRD-213ENST00000537002 OR1N2Q8NGR9 330 aa4.54□□□□□ -1.68
PTPRD-213ENST00000537002 OCC1Q8TAD7 63 aa4.54□□□□□ -1.68
PTPRD-213ENST00000537002 FAM222BQ8WU58 562 aa4.54□□□□□ -1.68
PTPRD-213ENST00000537002 C18orf15Q96N68 181 aa4.54□□□□□ -1.68
PTPRD-213ENST00000537002 SF3B5Q9BWJ5 86 aaKnown RBP4.54□□□□□ -1.68
PTPRD-213ENST00000537002 IGKV1D-13A0A0B4J2D9 117 aa4.54□□□□□ -1.68
PTPRD-213ENST00000537002 hDV102S1A0JD36 115 aa4.54□□□□□ -1.68
PTPRD-213ENST00000537002 SIVA1O15304 175 aa4.54□□□□□ -1.68
PTPRD-213ENST00000537002 IGKV1-13P0DP09 117 aa4.54□□□□□ -1.68
PTPRD-213ENST00000537002 GZMHP20718 246 aa4.54□□□□□ -1.68
PTPRD-213ENST00000537002 TBR1Q16650 682 aa4.54□□□□□ -1.68
PTPRD-213ENST00000537002 MIR17HGQ75NE6 70 aa4.54□□□□□ -1.68
PTPRD-213ENST00000537002 DRAM1Q8N682 238 aa4.54□□□□□ -1.68
PTPRD-213ENST00000537002 RPEQ96AT9 228 aa4.54□□□□□ -1.68
PTPRD-213ENST00000537002 EAF1Q96JC9 268 aaPredicted RBP4.54□□□□□ -1.68
PTPRD-213ENST00000537002 ATP6V0BQ99437 205 aa4.54□□□□□ -1.68
PTPRD-213ENST00000537002 NABP2Q9BQ15 211 aa4.54□□□□□ -1.68
PTPRD-213ENST00000537002 SLC25A10Q9UBX3 287 aaPredicted RBP4.54□□□□□ -1.68
PTPRD-213ENST00000537002 ZNF256Q9Y2P7 627 aaPredicted RBP4.54□□□□□ -1.68
PTPRD-213ENST00000537002 CHD3Q12873 2000 aaKnown RBP4.54□□□□□ -1.68
PTPRD-213ENST00000537002 DOCK3Q8IZD9 2030 aa4.54□□□□□ -1.68
PTPRD-213ENST00000537002 POLR2AP24928 1970 aaKnown RBP4.54□□□□□ -1.68
PTPRD-213ENST00000537002 LGALS4P56470 323 aa4.54□□□□□ -1.68
PTPRD-213ENST00000537002 RHBDD2Q6NTF9 364 aa4.54□□□□□ -1.68
PTPRD-213ENST00000537002 SRSF12Q8WXF0 261 aaKnown RBP4.54□□□□□ -1.68
PTPRD-213ENST00000537002 SNRNP40Q96DI7 357 aaKnown RBP4.54□□□□□ -1.68
PTPRD-213ENST00000537002 ZNF414Q96IQ9 312 aa4.54□□□□□ -1.68
PTPRD-213ENST00000537002 AMMECR1Q9Y4X0 333 aaPredicted RBP4.54□□□□□ -1.68
PTPRD-213ENST00000537002 IGHV3OR15-7A0A075B7D8 119 aa4.54□□□□□ -1.68
PTPRD-213ENST00000537002 CRXO43186 299 aaPredicted RBP4.54□□□□□ -1.68
PTPRD-213ENST00000537002 CKS2P33552 79 aa4.54□□□□□ -1.68
PTPRD-213ENST00000537002 KIR2DL1P43626 348 aaPredicted RBP4.54□□□□□ -1.68
PTPRD-213ENST00000537002 KIR2DL2P43627 348 aaPredicted RBP4.54□□□□□ -1.68
PTPRD-213ENST00000537002 RNF144BQ7Z419 303 aa4.54□□□□□ -1.68
PTPRD-213ENST00000537002 OR10W1Q8NGF6 305 aa4.54□□□□□ -1.68
PTPRD-213ENST00000537002 RND1Q92730 232 aa4.54□□□□□ -1.68
PTPRD-213ENST00000537002 NHP2Q9NX24 153 aaKnown RBP4.54□□□□□ -1.68
PTPRD-213ENST00000537002 FBXL7Q9UJT9 491 aa4.54□□□□□ -1.68
PTPRD-213ENST00000537002 PPIAL4EA0A075B759 164 aa4.53□□□□□ -1.68
PTPRD-213ENST00000537002 A0A1B0GW15 77 aa4.53□□□□□ -1.68
PTPRD-213ENST00000537002 PPIAL4FP0DN26 164 aa4.53□□□□□ -1.68
PTPRD-213ENST00000537002 C3AR1Q16581 482 aa4.53□□□□□ -1.68
PTPRD-213ENST00000537002 FAM27BQ5VT28 67 aa4.53□□□□□ -1.68
PTPRD-213ENST00000537002 CXXC4Q9H2H0 198 aa4.53□□□□□ -1.68
PTPRD-213ENST00000537002 MS4A5Q9H3V2 200 aa4.53□□□□□ -1.68
PTPRD-213ENST00000537002 EPOPA6NHQ4 379 aa4.53□□□□□ -1.68
PTPRD-213ENST00000537002 IFNL4K9M1U5 179 aa4.53□□□□□ -1.68
PTPRD-213ENST00000537002 NDUFB8O95169 186 aa4.53□□□□□ -1.68
PTPRD-213ENST00000537002 MGPP08493 103 aa4.53□□□□□ -1.68
PTPRD-213ENST00000537002 ZNF766Q5HY98 468 aa4.53□□□□□ -1.68
PTPRD-213ENST00000537002 SFTA2Q6UW10 78 aa4.53□□□□□ -1.68
PTPRD-213ENST00000537002 DEPPQ9NTK1 212 aa4.53□□□□□ -1.68
PTPRD-213ENST00000537002 MRPL16Q9NX20 251 aaKnown RBP4.53□□□□□ -1.68
PTPRD-213ENST00000537002 SPANXCQ9NY87 97 aa4.53□□□□□ -1.68
PTPRD-213ENST00000537002 DLL3Q9NYJ7 618 aa4.53□□□□□ -1.68
PTPRD-213ENST00000537002 A0A087X0K7 114 aa4.53□□□□□ -1.68
PTPRD-213ENST00000537002 H0YJW9 148 aa4.53□□□□□ -1.68
PTPRD-213ENST00000537002 C8orf88P0DMB2 117 aa4.53□□□□□ -1.68
PTPRD-213ENST00000537002 GABRG2P18507 467 aa4.53□□□□□ -1.68
PTPRD-213ENST00000537002 KLF5Q13887 457 aaPredicted RBP4.53□□□□□ -1.68
PTPRD-213ENST00000537002 HIGD1AQ9Y241 93 aa4.53□□□□□ -1.68
PTPRD-213ENST00000537002 IGKV1-9A0A0C4DH69 117 aa4.53□□□□□ -1.68
PTPRD-213ENST00000537002 FNDC10F2Z333 226 aa4.53□□□□□ -1.68
PTPRD-213ENST00000537002 H3BRM9 83 aa4.53□□□□□ -1.68
PTPRD-213ENST00000537002 VWC2Q2TAL6 325 aa4.53□□□□□ -1.68
PTPRD-213ENST00000537002 NRN1LQ496H8 165 aa4.53□□□□□ -1.68
PTPRD-213ENST00000537002 FER1L6-AS1Q8NA97 138 aa4.53□□□□□ -1.68
PTPRD-213ENST00000537002 SEC16AO15027 2179 aa4.53□□□□□ -1.68
PTPRD-213ENST00000537002 C19orf67A6NJJ6 358 aa4.53□□□□□ -1.68
PTPRD-213ENST00000537002 CCL3P10147 92 aa4.53□□□□□ -1.68
PTPRD-213ENST00000537002 SRD5A2P31213 254 aa4.53□□□□□ -1.68
PTPRD-213ENST00000537002 LHX2P50458 406 aa4.53□□□□□ -1.68
PTPRD-213ENST00000537002 ZNF788Q6ZQV5 615 aa4.53□□□□□ -1.68
PTPRD-213ENST00000537002 M0R3E3 92 aa4.53□□□□□ -1.68
PTPRD-213ENST00000537002 TSPAN13O95857 204 aa4.53□□□□□ -1.68
PTPRD-213ENST00000537002 SP9P0CG40 484 aa4.53□□□□□ -1.68
PTPRD-213ENST00000537002 HSD52Q0P140 79 aa4.53□□□□□ -1.68
PTPRD-213ENST00000537002 LYZL6O75951 148 aa4.52□□□□□ -1.69
PTPRD-213ENST00000537002 Q6ZS52 159 aa4.52□□□□□ -1.69
PTPRD-213ENST00000537002 SLC25A33Q9BSK2 321 aa4.52□□□□□ -1.69
PTPRD-213ENST00000537002 UBTD1Q9HAC8 227 aa4.52□□□□□ -1.69
PTPRD-213ENST00000537002 PROCRQ9UNN8 238 aa4.52□□□□□ -1.69
PTPRD-213ENST00000537002 IGHV1OR21-1A0A087WYE8 117 aa4.52□□□□□ -1.69
PTPRD-213ENST00000537002 A0A0G2JLM5 398 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms