RNA–Protein interactions for RNA: ENST00000536717.5

TNFRSF1A-209, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,503 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-209ENST00000536717 PRAF2O60831 178 aa13.74□□□□□ -0.21
TNFRSF1A-209ENST00000536717 IL5P05113 134 aa13.74□□□□□ -0.21
TNFRSF1A-209ENST00000536717 P0C879 139 aa13.74□□□□□ -0.21
TNFRSF1A-209ENST00000536717 INSL3P51460 131 aa13.74□□□□□ -0.21
TNFRSF1A-209ENST00000536717 LYZL2Q7Z4W2 148 aa13.74□□□□□ -0.21
TNFRSF1A-209ENST00000536717 ZNF431Q8TF32 576 aaPredicted RBP13.74□□□□□ -0.21
TNFRSF1A-209ENST00000536717 PRR25Q96S07 402 aa13.74□□□□□ -0.21
TNFRSF1A-209ENST00000536717 SPIN2AQ99865 258 aa13.74□□□□□ -0.21
TNFRSF1A-209ENST00000536717 SPIN2BQ9BPZ2 258 aa13.74□□□□□ -0.21
TNFRSF1A-209ENST00000536717 SEC22CQ9BRL7 303 aa13.74□□□□□ -0.21
TNFRSF1A-209ENST00000536717 COA4Q9NYJ1 87 aa13.74□□□□□ -0.21
TNFRSF1A-209ENST00000536717 NSG2Q9Y328 171 aa13.74□□□□□ -0.21
TNFRSF1A-209ENST00000536717 C15orf61A6NNL5 157 aa13.73□□□□□ -0.21
TNFRSF1A-209ENST00000536717 SPNP16150 400 aa13.73□□□□□ -0.21
TNFRSF1A-209ENST00000536717 RPL27AP46776 148 aaKnown RBP13.73□□□□□ -0.21
TNFRSF1A-209ENST00000536717 OR2B8PP59922 312 aa13.73□□□□□ -0.21
TNFRSF1A-209ENST00000536717 MITD1Q8WV92 249 aa13.73□□□□□ -0.21
TNFRSF1A-209ENST00000536717 TMED3Q9Y3Q3 217 aa13.73□□□□□ -0.21
TNFRSF1A-209ENST00000536717 A0A0G2JLM5 398 aa13.72□□□□□ -0.21
TNFRSF1A-209ENST00000536717 A0A0G2JRQ6 117 aa13.72□□□□□ -0.21
TNFRSF1A-209ENST00000536717 C13orf42A0A1B0GVH6 325 aa13.72□□□□□ -0.21
TNFRSF1A-209ENST00000536717 IZUMO4Q1ZYL8 232 aa13.72□□□□□ -0.21
TNFRSF1A-209ENST00000536717 ZNF429Q86V71 674 aa13.72□□□□□ -0.21
TNFRSF1A-209ENST00000536717 FYTTD1Q96QD9 318 aaKnown RBP13.72□□□□□ -0.21
TNFRSF1A-209ENST00000536717 TMEM14BQ9NUH8 114 aa13.72□□□□□ -0.21
TNFRSF1A-209ENST00000536717 LSM4Q9Y4Z0 139 aaKnown RBP13.72□□□□□ -0.21
TNFRSF1A-209ENST00000536717 OR51B2Q9Y5P1 312 aa13.72□□□□□ -0.21
TNFRSF1A-209ENST00000536717 E7EUB6 86 aa13.71□□□□□ -0.21
TNFRSF1A-209ENST00000536717 HOXB5P09067 269 aa13.71□□□□□ -0.21
TNFRSF1A-209ENST00000536717 NMSQ5H8A3 153 aa13.71□□□□□ -0.21
TNFRSF1A-209ENST00000536717 ACSM6Q6P461 480 aa13.71□□□□□ -0.21
TNFRSF1A-209ENST00000536717 OR1L8Q8NGR8 309 aa13.71□□□□□ -0.21
TNFRSF1A-209ENST00000536717 OR5B3Q8NH48 314 aa13.71□□□□□ -0.21
TNFRSF1A-209ENST00000536717 GPR146Q96CH1 333 aa13.71□□□□□ -0.21
TNFRSF1A-209ENST00000536717 PDCD10Q9BUL8 212 aa13.71□□□□□ -0.21
TNFRSF1A-209ENST00000536717 RANGRFQ9HD47 186 aaPredicted RBP13.71□□□□□ -0.21
TNFRSF1A-209ENST00000536717 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.71□□□□□ -0.21
TNFRSF1A-209ENST00000536717 CACNG5Q9UF02 275 aa13.71□□□□□ -0.21
TNFRSF1A-209ENST00000536717 A0A0B4J293 547 aa13.7□□□□□ -0.22
TNFRSF1A-209ENST00000536717 SAP30O75446 220 aa13.7□□□□□ -0.22
TNFRSF1A-209ENST00000536717 IFNA21P01568 189 aa13.7□□□□□ -0.22
TNFRSF1A-209ENST00000536717 SULT1A3P0DMM9 295 aa13.7□□□□□ -0.22
TNFRSF1A-209ENST00000536717 SULT1A4P0DMN0 295 aa13.7□□□□□ -0.22
TNFRSF1A-209ENST00000536717 MYOD1P15172 320 aa13.7□□□□□ -0.22
TNFRSF1A-209ENST00000536717 THOC7Q6I9Y2 204 aaKnown RBP13.7□□□□□ -0.22
TNFRSF1A-209ENST00000536717 C12orf45Q8N5I9 185 aaPredicted RBP13.7□□□□□ -0.22
TNFRSF1A-209ENST00000536717 UXS1Q8NBZ7 420 aa13.7□□□□□ -0.22
TNFRSF1A-209ENST00000536717 QTRT1Q9BXR0 403 aaKnown RBP13.7□□□□□ -0.22
TNFRSF1A-209ENST00000536717 ZNF256Q9Y2P7 627 aaPredicted RBP13.7□□□□□ -0.22
TNFRSF1A-209ENST00000536717 ZNF257Q9Y2Q1 563 aa13.7□□□□□ -0.22
TNFRSF1A-209ENST00000536717 TEX50A0A1B0GTY4 177 aa13.69□□□□□ -0.22
TNFRSF1A-209ENST00000536717 A0A1B0GW64 132 aa13.69□□□□□ -0.22
TNFRSF1A-209ENST00000536717 ANKRD34BA5PLL1 514 aa13.69□□□□□ -0.22
TNFRSF1A-209ENST00000536717 DBX1A6NMT0 343 aa13.69□□□□□ -0.22
TNFRSF1A-209ENST00000536717 SNRPGP15A8MWD9 76 aa13.69□□□□□ -0.22
TNFRSF1A-209ENST00000536717 TEX22C9J3V5 150 aa13.69□□□□□ -0.22
TNFRSF1A-209ENST00000536717 PRH1P02810 166 aa13.69□□□□□ -0.22
TNFRSF1A-209ENST00000536717 SMCO1Q147U7 214 aa13.69□□□□□ -0.22
TNFRSF1A-209ENST00000536717 ZNF343Q6P1L6 599 aa13.69□□□□□ -0.22
TNFRSF1A-209ENST00000536717 Q6ZRM9 215 aa13.69□□□□□ -0.22
TNFRSF1A-209ENST00000536717 TTC9CQ8N5M4 171 aa13.69□□□□□ -0.22
TNFRSF1A-209ENST00000536717 USMG5Q96IX5 58 aa13.69□□□□□ -0.22
TNFRSF1A-209ENST00000536717 B9D2Q9BPU9 175 aa13.69□□□□□ -0.22
TNFRSF1A-209ENST00000536717 HINT2Q9BX68 163 aa13.69□□□□□ -0.22
TNFRSF1A-209ENST00000536717 TRBV9A0A0B4J1U6 114 aa13.69□□□□□ -0.22
TNFRSF1A-209ENST00000536717 A0A1B0GU03 582 aa13.69□□□□□ -0.22
TNFRSF1A-209ENST00000536717 HMX3A6NHT5 357 aa13.69□□□□□ -0.22
TNFRSF1A-209ENST00000536717 TRBV12-3P01733 135 aa13.69□□□□□ -0.22
TNFRSF1A-209ENST00000536717 TRAPPC2P0DI81 140 aa13.69□□□□□ -0.22
TNFRSF1A-209ENST00000536717 TRAPPC2BP0DI82 140 aa13.69□□□□□ -0.22
TNFRSF1A-209ENST00000536717 HSPE1P61604 102 aaKnown RBP13.69□□□□□ -0.22
TNFRSF1A-209ENST00000536717 GGNBP1Q5YKI7 109 aa13.69□□□□□ -0.22
TNFRSF1A-209ENST00000536717 NDUFA4L2Q9NRX3 87 aa13.69□□□□□ -0.22
TNFRSF1A-209ENST00000536717 CACFD1Q9UGQ2 172 aa13.69□□□□□ -0.22
TNFRSF1A-209ENST00000536717 HUWE1Q7Z6Z7 4374 aaKnown RBP13.68□□□□□ -0.22
TNFRSF1A-209ENST00000536717 ST8SIA3O43173 380 aa13.68□□□□□ -0.22
TNFRSF1A-209ENST00000536717 ADAP1O75689 374 aa13.68□□□□□ -0.22
TNFRSF1A-209ENST00000536717 IFNA17P01571 189 aa13.68□□□□□ -0.22
TNFRSF1A-209ENST00000536717 SLC25A6P12236 298 aa13.68□□□□□ -0.22
TNFRSF1A-209ENST00000536717 ZP3P21754 424 aa13.68□□□□□ -0.22
TNFRSF1A-209ENST00000536717 RHOGP84095 191 aa13.68□□□□□ -0.22
TNFRSF1A-209ENST00000536717 OXA1LQ15070 435 aa13.68□□□□□ -0.22
TNFRSF1A-209ENST00000536717 TATDN3Q17R31 274 aa13.68□□□□□ -0.22
TNFRSF1A-209ENST00000536717 HSD17B13Q7Z5P4 300 aaPredicted RBP13.68□□□□□ -0.22
TNFRSF1A-209ENST00000536717 SRSF8Q9BRL6 282 aaKnown RBP13.68□□□□□ -0.22
TNFRSF1A-209ENST00000536717 PEF1Q9UBV8 284 aaKnown RBP13.68□□□□□ -0.22
TNFRSF1A-209ENST00000536717 CD69Q07108 199 aa13.67□□□□□ -0.22
TNFRSF1A-209ENST00000536717 KLF5Q13887 457 aaPredicted RBP13.67□□□□□ -0.22
TNFRSF1A-209ENST00000536717 C11orf87Q6NUJ2 197 aa13.67□□□□□ -0.22
TNFRSF1A-209ENST00000536717 OR1S1Q8NH92 325 aa13.67□□□□□ -0.22
TNFRSF1A-209ENST00000536717 CGB1A6NKQ9 187 aa13.66□□□□□ -0.22
TNFRSF1A-209ENST00000536717 FAM223BA6NKX1 122 aa13.66□□□□□ -0.22
TNFRSF1A-209ENST00000536717 PRCDQ00LT1 54 aa13.66□□□□□ -0.22
TNFRSF1A-209ENST00000536717 AARDQ4LEZ3 155 aa13.66□□□□□ -0.22
TNFRSF1A-209ENST00000536717 C19orf35Q6ZS72 473 aa13.66□□□□□ -0.22
TNFRSF1A-209ENST00000536717 FAM223AQ8IWN6 122 aa13.66□□□□□ -0.22
TNFRSF1A-209ENST00000536717 OR52E5Q8NH55 327 aa13.66□□□□□ -0.22
TNFRSF1A-209ENST00000536717 PLEKHA3Q9HB20 300 aa13.66□□□□□ -0.22
TNFRSF1A-209ENST00000536717 NPIPB5A8MRT5 1133 aa13.65□□□□□ -0.22
TNFRSF1A-209ENST00000536717 LY86O95711 162 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 213.8 ms