RNA–Protein interactions for RNA: ENST00000536708.6

CDK5RAP3-202, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2 BASIC

Gene CDK5RAP3, Length 1,975 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-202ENST00000536708 LOXL3P58215 753 aa10.54□□□□□ -0.72
CDK5RAP3-202ENST00000536708 C17orf58Q2M2W7 97 aa10.54□□□□□ -0.72
CDK5RAP3-202ENST00000536708 CYP2G1PQ6ZSU1 146 aa10.54□□□□□ -0.72
CDK5RAP3-202ENST00000536708 OR10G9Q8NGN4 311 aa10.54□□□□□ -0.72
CDK5RAP3-202ENST00000536708 OR10G7Q8NGN6 311 aa10.54□□□□□ -0.72
CDK5RAP3-202ENST00000536708 LEAP2Q969E1 77 aa10.54□□□□□ -0.72
CDK5RAP3-202ENST00000536708 SSX3Q99909 188 aa10.54□□□□□ -0.72
CDK5RAP3-202ENST00000536708 OR6C3Q9NZP0 311 aa10.54□□□□□ -0.72
CDK5RAP3-202ENST00000536708 NAT8Q9UHE5 227 aa10.54□□□□□ -0.72
CDK5RAP3-202ENST00000536708 TRGV10A0A0A0MS01 117 aa10.54□□□□□ -0.72
CDK5RAP3-202ENST00000536708 KBTBD11O94819 623 aa10.54□□□□□ -0.72
CDK5RAP3-202ENST00000536708 FSTL3O95633 263 aa10.54□□□□□ -0.72
CDK5RAP3-202ENST00000536708 OR9G9P0C7N8 305 aa10.54□□□□□ -0.72
CDK5RAP3-202ENST00000536708 KIR2DS2P43631 304 aa10.54□□□□□ -0.72
CDK5RAP3-202ENST00000536708 PSMB3P49720 205 aa10.54□□□□□ -0.72
CDK5RAP3-202ENST00000536708 DLX1P56177 255 aa10.54□□□□□ -0.72
CDK5RAP3-202ENST00000536708 SPCS3P61009 180 aa10.54□□□□□ -0.72
CDK5RAP3-202ENST00000536708 PRB3Q04118 309 aaPredicted RBP10.54□□□□□ -0.72
CDK5RAP3-202ENST00000536708 TMEM155Q4W5P6 130 aa10.54□□□□□ -0.72
CDK5RAP3-202ENST00000536708 FFAR4Q5NUL3 377 aa10.54□□□□□ -0.72
CDK5RAP3-202ENST00000536708 PRAMEF5Q5TYX0 476 aa10.54□□□□□ -0.72
CDK5RAP3-202ENST00000536708 TMEM183AQ8IXX5 376 aa10.54□□□□□ -0.72
CDK5RAP3-202ENST00000536708 Q8N7P7 452 aa10.54□□□□□ -0.72
CDK5RAP3-202ENST00000536708 OR8B3Q8NGG8 313 aa10.54□□□□□ -0.72
CDK5RAP3-202ENST00000536708 OR8B2Q96RD0 313 aa10.54□□□□□ -0.72
CDK5RAP3-202ENST00000536708 WDR83OSQ9Y284 106 aa10.54□□□□□ -0.72
CDK5RAP3-202ENST00000536708 C22orf46C9J442 243 aa10.53□□□□□ -0.72
CDK5RAP3-202ENST00000536708 LINC00205P59089 165 aa10.53□□□□□ -0.72
CDK5RAP3-202ENST00000536708 RPP30P78346 268 aaKnown RBP10.53□□□□□ -0.72
CDK5RAP3-202ENST00000536708 JOSD1Q15040 202 aaPredicted RBP10.53□□□□□ -0.72
CDK5RAP3-202ENST00000536708 TMEM200BQ69YZ2 307 aa10.53□□□□□ -0.72
CDK5RAP3-202ENST00000536708 ZNF709Q8N972 641 aa10.53□□□□□ -0.72
CDK5RAP3-202ENST00000536708 NEIL1Q96FI4 390 aaPredicted RBP10.53□□□□□ -0.72
CDK5RAP3-202ENST00000536708 C2orf88Q9BSF0 95 aa10.53□□□□□ -0.72
CDK5RAP3-202ENST00000536708 QTRT1Q9BXR0 403 aaKnown RBP10.53□□□□□ -0.72
CDK5RAP3-202ENST00000536708 RAB9BQ9NP90 201 aa10.53□□□□□ -0.72
CDK5RAP3-202ENST00000536708 GNG12Q9UBI6 72 aa10.53□□□□□ -0.72
CDK5RAP3-202ENST00000536708 IGHV4-30-2A0A087WSY4 118 aa10.52□□□□□ -0.72
CDK5RAP3-202ENST00000536708 MPDU1O75352 247 aa10.52□□□□□ -0.72
CDK5RAP3-202ENST00000536708 TMEM241Q24JQ0 296 aa10.52□□□□□ -0.72
CDK5RAP3-202ENST00000536708 ACOT6Q3I5F7 207 aaPredicted RBP10.52□□□□□ -0.72
CDK5RAP3-202ENST00000536708 OR4X1Q8NH49 305 aa10.52□□□□□ -0.72
CDK5RAP3-202ENST00000536708 RNASEH2CQ8TDP1 164 aaKnown RBP10.52□□□□□ -0.72
CDK5RAP3-202ENST00000536708 FAM168AQ92567 244 aa10.52□□□□□ -0.72
CDK5RAP3-202ENST00000536708 RAB24Q969Q5 203 aa10.52□□□□□ -0.72
CDK5RAP3-202ENST00000536708 IFI27L2Q9H2X8 130 aa10.52□□□□□ -0.72
CDK5RAP3-202ENST00000536708 SRD5A3Q9H8P0 318 aa10.52□□□□□ -0.72
CDK5RAP3-202ENST00000536708 PATZ1Q9HBE1 687 aaKnown RBP10.52□□□□□ -0.72
CDK5RAP3-202ENST00000536708 LINC00312Q9Y6C7 94 aa10.52□□□□□ -0.72
CDK5RAP3-202ENST00000536708 KBTBD11-OT1A0A1B0GTJ5 212 aa10.52□□□□□ -0.73
CDK5RAP3-202ENST00000536708 FCGR3BO75015 233 aa10.52□□□□□ -0.73
CDK5RAP3-202ENST00000536708 RBMXL2O75526 392 aaKnown RBP10.52□□□□□ -0.73
CDK5RAP3-202ENST00000536708 AMBPP02760 352 aa10.52□□□□□ -0.73
CDK5RAP3-202ENST00000536708 VDAC2P45880 294 aaPredicted RBP10.52□□□□□ -0.73
CDK5RAP3-202ENST00000536708 PDLIM4P50479 330 aa10.52□□□□□ -0.73
CDK5RAP3-202ENST00000536708 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.52□□□□□ -0.73
CDK5RAP3-202ENST00000536708 OR10A7Q8NGE5 316 aa10.52□□□□□ -0.73
CDK5RAP3-202ENST00000536708 OR1P1Q8NH06 330 aa10.52□□□□□ -0.73
CDK5RAP3-202ENST00000536708 C10orf105Q8TEF2 133 aa10.52□□□□□ -0.73
CDK5RAP3-202ENST00000536708 DDB2Q92466 427 aa10.52□□□□□ -0.73
CDK5RAP3-202ENST00000536708 PYGO2Q9BRQ0 406 aa10.52□□□□□ -0.73
CDK5RAP3-202ENST00000536708 SLC25A22Q9H936 323 aa10.52□□□□□ -0.73
CDK5RAP3-202ENST00000536708 ZNRD1Q9P1U0 126 aa10.52□□□□□ -0.73
CDK5RAP3-202ENST00000536708 CREBBPQ92793 2442 aa10.52□□□□□ -0.73
CDK5RAP3-202ENST00000536708 CR1P17927 2039 aa10.51□□□□□ -0.73
CDK5RAP3-202ENST00000536708 hADV38S2A0JD32 116 aa10.51□□□□□ -0.73
CDK5RAP3-202ENST00000536708 CD1BP29016 333 aa10.51□□□□□ -0.73
CDK5RAP3-202ENST00000536708 RAB7AP51149 207 aa10.51□□□□□ -0.73
CDK5RAP3-202ENST00000536708 LBHQ53QV2 105 aaPredicted RBP10.51□□□□□ -0.73
CDK5RAP3-202ENST00000536708 C16orf82Q7Z2V1 217 aa10.51□□□□□ -0.73
CDK5RAP3-202ENST00000536708 ZNF714Q96N38 554 aa10.51□□□□□ -0.73
CDK5RAP3-202ENST00000536708 SMIM7Q9BQ49 75 aa10.51□□□□□ -0.73
CDK5RAP3-202ENST00000536708 ZNF469Q96JG9 3925 aaPredicted RBP10.51□□□□□ -0.73
CDK5RAP3-202ENST00000536708 IGHV4-61A0A0C4DH41 118 aa10.5□□□□□ -0.73
CDK5RAP3-202ENST00000536708 PRSS46E5RG02 174 aa10.5□□□□□ -0.73
CDK5RAP3-202ENST00000536708 M0R1X1 148 aa10.5□□□□□ -0.73
CDK5RAP3-202ENST00000536708 PFN1P07737 140 aaKnown RBP10.5□□□□□ -0.73
CDK5RAP3-202ENST00000536708 ZFP36P26651 326 aaKnown RBP10.5□□□□□ -0.73
CDK5RAP3-202ENST00000536708 ZNF134P52741 427 aa10.5□□□□□ -0.73
CDK5RAP3-202ENST00000536708 RELBQ01201 579 aa10.5□□□□□ -0.73
CDK5RAP3-202ENST00000536708 CLEC2AQ6UVW9 174 aa10.5□□□□□ -0.73
CDK5RAP3-202ENST00000536708 OR4A16Q8NH70 328 aa10.5□□□□□ -0.73
CDK5RAP3-202ENST00000536708 NOL4LQ96MY1 436 aaPredicted RBP10.5□□□□□ -0.73
CDK5RAP3-202ENST00000536708 S1PR3Q99500 378 aa10.5□□□□□ -0.73
CDK5RAP3-202ENST00000536708 PIMREGQ9BSJ6 248 aa10.5□□□□□ -0.73
CDK5RAP3-202ENST00000536708 SSBP3Q9BWW4 388 aaPredicted RBP10.5□□□□□ -0.73
CDK5RAP3-202ENST00000536708 RPUSD1Q9UJJ7 312 aaKnown RBP10.5□□□□□ -0.73
CDK5RAP3-202ENST00000536708 FLNAP21333 2647 aaKnown RBP10.5□□□□□ -0.73
CDK5RAP3-202ENST00000536708 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.5□□□□□ -0.733e-7■■■□□ 15.6
CDK5RAP3-202ENST00000536708 GZMBP10144 247 aa10.5□□□□□ -0.73
CDK5RAP3-202ENST00000536708 GNG10P50151 68 aa10.5□□□□□ -0.73
CDK5RAP3-202ENST00000536708 DLX6P56179 175 aa10.5□□□□□ -0.73
CDK5RAP3-202ENST00000536708 ERVK-16P61578 105 aa10.5□□□□□ -0.73
CDK5RAP3-202ENST00000536708 LMO4P61968 165 aa10.5□□□□□ -0.73
CDK5RAP3-202ENST00000536708 RPL23P62829 140 aaKnown RBP10.5□□□□□ -0.73
CDK5RAP3-202ENST00000536708 LCN2P80188 198 aa10.5□□□□□ -0.73
CDK5RAP3-202ENST00000536708 MEF2CQ06413 473 aaPredicted RBP10.5□□□□□ -0.73
CDK5RAP3-202ENST00000536708 SSX2Q16385 188 aa10.5□□□□□ -0.73
CDK5RAP3-202ENST00000536708 BSXQ3C1V8 233 aa10.5□□□□□ -0.73
CDK5RAP3-202ENST00000536708 COA6Q5JTJ3 125 aaKnown RBP10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms