RNA–Protein interactions for RNA: ENST00000536603.5

CCDC61-201, Transcript of coiled-coil domain containing 61, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC61, Length 1,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC61-201ENST00000536603 PRNDQ9UKY0 176 aa13.84□□□□□ -0.19
CCDC61-201ENST00000536603 OR51B2Q9Y5P1 312 aa13.84□□□□□ -0.19
CCDC61-201ENST00000536603 IGLC7A0M8Q6 106 aa13.83□□□□□ -0.2
CCDC61-201ENST00000536603 FAM223BA6NKX1 122 aa13.83□□□□□ -0.2
CCDC61-201ENST00000536603 DBX1A6NMT0 343 aa13.83□□□□□ -0.2
CCDC61-201ENST00000536603 OR2J3O76001 311 aa13.83□□□□□ -0.2
CCDC61-201ENST00000536603 CTRB1P17538 263 aa13.83□□□□□ -0.2
CCDC61-201ENST00000536603 VAMP1P23763 118 aa13.83□□□□□ -0.2
CCDC61-201ENST00000536603 UBE2MP61081 183 aaKnown RBP13.83□□□□□ -0.2
CCDC61-201ENST00000536603 ATP5G2Q06055 141 aa13.83□□□□□ -0.2
CCDC61-201ENST00000536603 CTRB2Q6GPI1 263 aa13.83□□□□□ -0.2
CCDC61-201ENST00000536603 LYG2Q86SG7 212 aa13.83□□□□□ -0.2
CCDC61-201ENST00000536603 FAM223AQ8IWN6 122 aa13.83□□□□□ -0.2
CCDC61-201ENST00000536603 NECAP1Q8NC96 275 aa13.83□□□□□ -0.2
CCDC61-201ENST00000536603 OR4A16Q8NH70 328 aa13.83□□□□□ -0.2
CCDC61-201ENST00000536603 DCUN1D4Q92564 292 aa13.83□□□□□ -0.2
CCDC61-201ENST00000536603 DLX4Q92988 240 aaPredicted RBP13.83□□□□□ -0.2
CCDC61-201ENST00000536603 SRSF8Q9BRL6 282 aaKnown RBP13.83□□□□□ -0.2
CCDC61-201ENST00000536603 RANGRFQ9HD47 186 aaPredicted RBP13.83□□□□□ -0.2
CCDC61-201ENST00000536603 NDUFA4L2Q9NRX3 87 aa13.83□□□□□ -0.2
CCDC61-201ENST00000536603 FKBP11Q9NYL4 201 aa13.83□□□□□ -0.2
CCDC61-201ENST00000536603 B3GALNT1O75752 331 aa13.82□□□□□ -0.2
CCDC61-201ENST00000536603 CDS2O95674 445 aa13.82□□□□□ -0.2
CCDC61-201ENST00000536603 DHFRP00374 187 aa13.82□□□□□ -0.2
CCDC61-201ENST00000536603 IL5P05113 134 aa13.82□□□□□ -0.2
CCDC61-201ENST00000536603 DEFA4P12838 97 aa13.82□□□□□ -0.2
CCDC61-201ENST00000536603 IZUMO4Q1ZYL8 232 aa13.82□□□□□ -0.2
CCDC61-201ENST00000536603 C4orf46Q504U0 113 aa13.82□□□□□ -0.2
CCDC61-201ENST00000536603 ZNF343Q6P1L6 599 aa13.82□□□□□ -0.2
CCDC61-201ENST00000536603 SELENOHQ8IZQ5 122 aaKnown RBP13.82□□□□□ -0.2
CCDC61-201ENST00000536603 TMEM56Q96MV1 263 aa13.82□□□□□ -0.2
CCDC61-201ENST00000536603 FANCD2OSQ96PS1 177 aa13.82□□□□□ -0.2
CCDC61-201ENST00000536603 TMEM14BQ9NUH8 114 aa13.82□□□□□ -0.2
CCDC61-201ENST00000536603 PEF1Q9UBV8 284 aaKnown RBP13.82□□□□□ -0.2
CCDC61-201ENST00000536603 ZMAT5Q9UDW3 170 aaKnown RBP13.82□□□□□ -0.2
CCDC61-201ENST00000536603 FBXL7Q9UJT9 491 aa13.82□□□□□ -0.2
CCDC61-201ENST00000536603 TMEM56-RWDD3S4R434 201 aa13.82□□□□□ -0.2
CCDC61-201ENST00000536603 C15orf61A6NNL5 157 aa13.81□□□□□ -0.2
CCDC61-201ENST00000536603 ATG12O94817 140 aa13.81□□□□□ -0.2
CCDC61-201ENST00000536603 IGKV1-5P01602 117 aa13.81□□□□□ -0.2
CCDC61-201ENST00000536603 HLA-AP01891 365 aaKnown RBP13.81□□□□□ -0.2
CCDC61-201ENST00000536603 OR13C7P0DN81 318 aa13.81□□□□□ -0.2
CCDC61-201ENST00000536603 AKR1C2P52895 323 aa13.81□□□□□ -0.2
CCDC61-201ENST00000536603 C15orf32Q32M92 178 aa13.81□□□□□ -0.2
CCDC61-201ENST00000536603 THOC7Q6I9Y2 204 aaKnown RBP13.81□□□□□ -0.2
CCDC61-201ENST00000536603 HSD17B13Q7Z5P4 300 aaPredicted RBP13.81□□□□□ -0.2
CCDC61-201ENST00000536603 OR5B3Q8NH48 314 aa13.81□□□□□ -0.2
CCDC61-201ENST00000536603 KCNIP3Q9Y2W7 256 aa13.81□□□□□ -0.2
CCDC61-201ENST00000536603 RYR3Q15413 4870 aa13.81□□□□□ -0.2
CCDC61-201ENST00000536603 A0A0G2JRQ6 117 aa13.8□□□□□ -0.2
CCDC61-201ENST00000536603 SEC14L6B5MCN3 397 aa13.8□□□□□ -0.2
CCDC61-201ENST00000536603 OVOL1O14753 267 aa13.8□□□□□ -0.2
CCDC61-201ENST00000536603 NDUFB8O95169 186 aa13.8□□□□□ -0.2
CCDC61-201ENST00000536603 TRBV12-3P01733 135 aa13.8□□□□□ -0.2
CCDC61-201ENST00000536603 WT1-ASQ06250 92 aa13.8□□□□□ -0.2
CCDC61-201ENST00000536603 EXOSC2Q13868 293 aaKnown RBP13.8□□□□□ -0.2
CCDC61-201ENST00000536603 LSM10Q969L4 123 aaKnown RBP13.8□□□□□ -0.2
CCDC61-201ENST00000536603 P0C879 139 aa13.79□□□□□ -0.2
CCDC61-201ENST00000536603 NHLRC4P0CG21 123 aaPredicted RBP13.79□□□□□ -0.2
CCDC61-201ENST00000536603 HIST1H1BP16401 226 aaKnown RBP13.79□□□□□ -0.2
CCDC61-201ENST00000536603 ZP3P21754 424 aa13.79□□□□□ -0.2
CCDC61-201ENST00000536603 C9orf66Q5T8R8 295 aa13.79□□□□□ -0.2
CCDC61-201ENST00000536603 TMEM268Q5VZI3 342 aa13.79□□□□□ -0.2
CCDC61-201ENST00000536603 LYZL2Q7Z4W2 148 aa13.79□□□□□ -0.2
CCDC61-201ENST00000536603 ZNF431Q8TF32 576 aaPredicted RBP13.79□□□□□ -0.2
CCDC61-201ENST00000536603 RRNAD1Q96FB5 475 aaKnown RBP13.79□□□□□ -0.2
CCDC61-201ENST00000536603 U3KQK5 164 aa13.79□□□□□ -0.2
CCDC61-201ENST00000536603 IGLV11-55A0A075B6I3 123 aa13.78□□□□□ -0.2
CCDC61-201ENST00000536603 ANXA3P12429 323 aa13.78□□□□□ -0.2
CCDC61-201ENST00000536603 HSPE1P61604 102 aaKnown RBP13.78□□□□□ -0.2
CCDC61-201ENST00000536603 TATDN3Q17R31 274 aa13.78□□□□□ -0.2
CCDC61-201ENST00000536603 KLK9Q2XQG4 91 aa13.78□□□□□ -0.2
CCDC61-201ENST00000536603 SLC35G3Q8N808 338 aa13.78□□□□□ -0.2
CCDC61-201ENST00000536603 LRTM2Q8N967 370 aa13.78□□□□□ -0.2
CCDC61-201ENST00000536603 RNASE11Q8TAA1 199 aaKnown RBP13.78□□□□□ -0.2
CCDC61-201ENST00000536603 MITD1Q8WV92 249 aa13.78□□□□□ -0.2
CCDC61-201ENST00000536603 RBPMSQ93062 196 aaKnown RBP13.78□□□□□ -0.2
CCDC61-201ENST00000536603 KLK9Q9UKQ9 250 aa13.78□□□□□ -0.2
CCDC61-201ENST00000536603 S4R3C0 116 aa13.78□□□□□ -0.2
CCDC61-201ENST00000536603 C7orf66A4D0T2 115 aa13.77□□□□□ -0.21
CCDC61-201ENST00000536603 IGHV3-23P01764 117 aa13.77□□□□□ -0.21
CCDC61-201ENST00000536603 Q6ZRM9 215 aa13.77□□□□□ -0.21
CCDC61-201ENST00000536603 ZNF429Q86V71 674 aa13.77□□□□□ -0.21
CCDC61-201ENST00000536603 LGI3Q8N145 548 aa13.77□□□□□ -0.21
CCDC61-201ENST00000536603 TENM3Q9P273 2699 aa13.77□□□□□ -0.21
CCDC61-201ENST00000536603 DMRT1Q9Y5R6 373 aa13.77□□□□□ -0.21
CCDC61-201ENST00000536603 ALG5Q9Y673 324 aa13.77□□□□□ -0.21
CCDC61-201ENST00000536603 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.76□□□□□ -0.21
CCDC61-201ENST00000536603 PRAF2O60831 178 aa13.76□□□□□ -0.21
CCDC61-201ENST00000536603 ADAP1O75689 374 aa13.76□□□□□ -0.21
CCDC61-201ENST00000536603 SLC25A24Q6NUK1 477 aa13.76□□□□□ -0.21
CCDC61-201ENST00000536603 IL22RA2Q969J5 263 aa13.76□□□□□ -0.21
CCDC61-201ENST00000536603 GPR146Q96CH1 333 aa13.76□□□□□ -0.21
CCDC61-201ENST00000536603 THYN1Q9P016 225 aa13.76□□□□□ -0.21
CCDC61-201ENST00000536603 A0A0B4J2A0 478 aa13.75□□□□□ -0.21
CCDC61-201ENST00000536603 SNRPGP15A8MWD9 76 aa13.75□□□□□ -0.21
CCDC61-201ENST00000536603 CYB5BO43169 146 aa13.75□□□□□ -0.21
CCDC61-201ENST00000536603 ST8SIA3O43173 380 aa13.75□□□□□ -0.21
CCDC61-201ENST00000536603 SAP30O75446 220 aa13.75□□□□□ -0.21
CCDC61-201ENST00000536603 HOXB5P09067 269 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms