RNA–Protein interactions for RNA: ENST00000535717.1

CHD4-203, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 660 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-203ENST00000535717 HYLS1Q96M11 299 aa9.38□□□□□ -0.91
CHD4-203ENST00000535717 SRSF8Q9BRL6 282 aaKnown RBP9.38□□□□□ -0.91
CHD4-203ENST00000535717 HINT2Q9BX68 163 aa9.38□□□□□ -0.91
CHD4-203ENST00000535717 ALX4Q9H161 411 aaPredicted RBP9.38□□□□□ -0.91
CHD4-203ENST00000535717 GNB4Q9HAV0 340 aa9.38□□□□□ -0.91
CHD4-203ENST00000535717 SHPKQ9UHJ6 478 aa9.38□□□□□ -0.91
CHD4-203ENST00000535717 ZNF257Q9Y2Q1 563 aa9.38□□□□□ -0.91
CHD4-203ENST00000535717 NBEAL1Q6ZS30 2694 aa9.37□□□□□ -0.91
CHD4-203ENST00000535717 NUDT19A8MXV4 375 aa9.37□□□□□ -0.91
CHD4-203ENST00000535717 ST8SIA3O43173 380 aa9.37□□□□□ -0.91
CHD4-203ENST00000535717 CRYGCP07315 174 aa9.37□□□□□ -0.91
CHD4-203ENST00000535717 H2AFB2P0C5Z0 115 aa9.37□□□□□ -0.91
CHD4-203ENST00000535717 TPPP2P59282 170 aa9.37□□□□□ -0.91
CHD4-203ENST00000535717 HSPE1P61604 102 aaKnown RBP9.37□□□□□ -0.91
CHD4-203ENST00000535717 DEFA5Q01523 94 aa9.37□□□□□ -0.91
CHD4-203ENST00000535717 WT1-ASQ06250 92 aa9.37□□□□□ -0.91
CHD4-203ENST00000535717 C4orf46Q504U0 113 aa9.37□□□□□ -0.91
CHD4-203ENST00000535717 NMSQ5H8A3 153 aa9.37□□□□□ -0.91
CHD4-203ENST00000535717 PRR31Q5SQ13 230 aa9.37□□□□□ -0.91
CHD4-203ENST00000535717 C8orf86Q6ZUL3 223 aa9.37□□□□□ -0.91
CHD4-203ENST00000535717 LYG2Q86SG7 212 aa9.37□□□□□ -0.91
CHD4-203ENST00000535717 DUSP18Q8NEJ0 188 aa9.37□□□□□ -0.91
CHD4-203ENST00000535717 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.37□□□□□ -0.91
CHD4-203ENST00000535717 CACNG5Q9UF02 275 aa9.37□□□□□ -0.91
CHD4-203ENST00000535717 TRBV9A0A0B4J1U6 114 aa9.36□□□□□ -0.91
CHD4-203ENST00000535717 DUS4LO95620 317 aaKnown RBP9.36□□□□□ -0.91
CHD4-203ENST00000535717 OR13C7P0DN81 318 aa9.36□□□□□ -0.91
CHD4-203ENST00000535717 MECP2P51608 486 aaKnown RBP9.36□□□□□ -0.91
CHD4-203ENST00000535717 B2MP61769 119 aa9.36□□□□□ -0.91
CHD4-203ENST00000535717 PRCDQ00LT1 54 aa9.36□□□□□ -0.91
CHD4-203ENST00000535717 AARDQ4LEZ3 155 aa9.36□□□□□ -0.91
CHD4-203ENST00000535717 SPINK9Q5DT21 86 aa9.36□□□□□ -0.91
CHD4-203ENST00000535717 CLLU1Q5K131 121 aa9.36□□□□□ -0.91
CHD4-203ENST00000535717 PLET1Q6UQ28 207 aa9.36□□□□□ -0.91
CHD4-203ENST00000535717 OR4F17Q8NGA8 305 aa9.36□□□□□ -0.91
CHD4-203ENST00000535717 OR52B4Q8NGK2 314 aa9.36□□□□□ -0.91
CHD4-203ENST00000535717 C4orf3Q8WVX3 66 aa9.36□□□□□ -0.91
CHD4-203ENST00000535717 OR5B12Q96R08 314 aa9.36□□□□□ -0.91
CHD4-203ENST00000535717 OR4F4Q96R69 305 aa9.36□□□□□ -0.91
CHD4-203ENST00000535717 RANGRFQ9HD47 186 aaPredicted RBP9.36□□□□□ -0.91
CHD4-203ENST00000535717 PIGBOS1A0A0B4J2F0 54 aa9.35□□□□□ -0.91
CHD4-203ENST00000535717 DUXBA0A1W2PPF3 345 aa9.35□□□□□ -0.91
CHD4-203ENST00000535717 I3L521 148 aa9.35□□□□□ -0.91
CHD4-203ENST00000535717 IFNA17P01571 189 aa9.35□□□□□ -0.91
CHD4-203ENST00000535717 IGHV3-11P01762 117 aa9.35□□□□□ -0.91
CHD4-203ENST00000535717 SULT1A3P0DMM9 295 aa9.35□□□□□ -0.91
CHD4-203ENST00000535717 SULT1A4P0DMN0 295 aa9.35□□□□□ -0.91
CHD4-203ENST00000535717 RHOGP84095 191 aa9.35□□□□□ -0.91
CHD4-203ENST00000535717 KLK9Q2XQG4 91 aa9.35□□□□□ -0.91
CHD4-203ENST00000535717 DEFB136Q30KP8 78 aa9.35□□□□□ -0.91
CHD4-203ENST00000535717 ETV3LQ6ZN32 361 aa9.35□□□□□ -0.91
CHD4-203ENST00000535717 HSD17B13Q7Z5P4 300 aaPredicted RBP9.35□□□□□ -0.91
CHD4-203ENST00000535717 RAX2Q96IS3 184 aa9.35□□□□□ -0.91
CHD4-203ENST00000535717 FANCD2OSQ96PS1 177 aa9.35□□□□□ -0.91
CHD4-203ENST00000535717 MED9Q9NWA0 146 aa9.35□□□□□ -0.91
CHD4-203ENST00000535717 ZMAT5Q9UDW3 170 aaKnown RBP9.35□□□□□ -0.91
CHD4-203ENST00000535717 KLK9Q9UKQ9 250 aa9.35□□□□□ -0.91
CHD4-203ENST00000535717 DMRT1Q9Y5R6 373 aa9.35□□□□□ -0.91
CHD4-203ENST00000535717 IGLV11-55A0A075B6I3 123 aa9.34□□□□□ -0.91
CHD4-203ENST00000535717 A0A0G2JLM5 398 aa9.34□□□□□ -0.91
CHD4-203ENST00000535717 A0A1B0GU03 582 aa9.34□□□□□ -0.91
CHD4-203ENST00000535717 C13orf42A0A1B0GVH6 325 aa9.34□□□□□ -0.91
CHD4-203ENST00000535717 OR2J3O76001 311 aa9.34□□□□□ -0.91
CHD4-203ENST00000535717 DHFRP00374 187 aa9.34□□□□□ -0.91
CHD4-203ENST00000535717 HOXB5P09067 269 aa9.34□□□□□ -0.91
CHD4-203ENST00000535717 DEFA4P12838 97 aa9.34□□□□□ -0.91
CHD4-203ENST00000535717 S100A12P80511 92 aa9.34□□□□□ -0.91
CHD4-203ENST00000535717 RUNX1Q01196 453 aa9.34□□□□□ -0.91
CHD4-203ENST00000535717 SMCO1Q147U7 214 aa9.34□□□□□ -0.91
CHD4-203ENST00000535717 LCE2DQ5TA82 110 aaPredicted RBP9.34□□□□□ -0.91
CHD4-203ENST00000535717 NECAP1Q8NC96 275 aa9.34□□□□□ -0.91
CHD4-203ENST00000535717 OR52E5Q8NH55 327 aa9.34□□□□□ -0.91
CHD4-203ENST00000535717 COQ8AQ8NI60 647 aa9.34□□□□□ -0.91
CHD4-203ENST00000535717 MITD1Q8WV92 249 aa9.34□□□□□ -0.91
CHD4-203ENST00000535717 USMG5Q96IX5 58 aa9.34□□□□□ -0.91
CHD4-203ENST00000535717 DUX3Q96PT4 197 aa9.34□□□□□ -0.91
CHD4-203ENST00000535717 SEC22CQ9BRL7 303 aa9.34□□□□□ -0.91
CHD4-203ENST00000535717 PDCD10Q9BUL8 212 aa9.34□□□□□ -0.91
CHD4-203ENST00000535717 PLEKHA3Q9HB20 300 aa9.34□□□□□ -0.91
CHD4-203ENST00000535717 TMED3Q9Y3Q3 217 aa9.34□□□□□ -0.91
CHD4-203ENST00000535717 FAM223BA6NKX1 122 aa9.33□□□□□ -0.92
CHD4-203ENST00000535717 FAM25EA8MYX2 175 aa9.33□□□□□ -0.92
CHD4-203ENST00000535717 CCL24O00175 119 aa9.33□□□□□ -0.92
CHD4-203ENST00000535717 ADAP1O75689 374 aa9.33□□□□□ -0.92
CHD4-203ENST00000535717 NXPH3O95157 252 aa9.33□□□□□ -0.92
CHD4-203ENST00000535717 NDUFB8O95169 186 aa9.33□□□□□ -0.92
CHD4-203ENST00000535717 LGALS1P09382 135 aaKnown RBP9.33□□□□□ -0.92
CHD4-203ENST00000535717 HIST1H1BP16401 226 aaKnown RBP9.33□□□□□ -0.92
CHD4-203ENST00000535717 MFAP2P55001 183 aa9.33□□□□□ -0.92
CHD4-203ENST00000535717 SPCS3P61009 180 aa9.33□□□□□ -0.92
CHD4-203ENST00000535717 RRAS2P62070 204 aaPredicted RBP9.33□□□□□ -0.92
CHD4-203ENST00000535717 ATP5G2Q06055 141 aa9.33□□□□□ -0.92
CHD4-203ENST00000535717 PDLIM3Q53GG5 364 aaPredicted RBP9.33□□□□□ -0.92
CHD4-203ENST00000535717 GGNBP1Q5YKI7 109 aa9.33□□□□□ -0.92
CHD4-203ENST00000535717 LAMTOR1Q6IAA8 161 aa9.33□□□□□ -0.92
CHD4-203ENST00000535717 TREML4Q6UXN2 200 aa9.33□□□□□ -0.92
CHD4-203ENST00000535717 FAM223AQ8IWN6 122 aa9.33□□□□□ -0.92
CHD4-203ENST00000535717 C9orf62Q8N4C0 152 aa9.33□□□□□ -0.92
CHD4-203ENST00000535717 OR2C3Q8N628 320 aa9.33□□□□□ -0.92
CHD4-203ENST00000535717 ZNF431Q8TF32 576 aaPredicted RBP9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms