RNA–Protein interactions for RNA: ENST00000535005.5

SCARB1-204, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best)

Gene SCARB1, Length 1,845 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-204ENST00000535005 ZNF695Q8IW36 515 aa9.98□□□□□ -0.81
SCARB1-204ENST00000535005 OR5C1Q8NGR4 320 aa9.98□□□□□ -0.81
SCARB1-204ENST00000535005 OR1P1Q8NH06 330 aa9.98□□□□□ -0.81
SCARB1-204ENST00000535005 CT45A3Q8NHU0 189 aa9.98□□□□□ -0.81
SCARB1-204ENST00000535005 URGCP-MRPS24S4R325 110 aa9.98□□□□□ -0.81
SCARB1-204ENST00000535005 TLN2Q9Y4G6 2542 aa9.98□□□□□ -0.81
SCARB1-204ENST00000535005 HIVEP1P15822 2718 aa9.98□□□□□ -0.81
SCARB1-204ENST00000535005 CELSR1Q9NYQ6 3014 aa9.98□□□□□ -0.81
SCARB1-204ENST00000535005 J3QR06 171 aa9.98□□□□□ -0.81
SCARB1-204ENST00000535005 TCAPO15273 167 aa9.98□□□□□ -0.81
SCARB1-204ENST00000535005 PPYP01298 95 aa9.98□□□□□ -0.81
SCARB1-204ENST00000535005 HOXB4P17483 251 aaPredicted RBP9.98□□□□□ -0.81
SCARB1-204ENST00000535005 VDAC1P21796 283 aa9.98□□□□□ -0.81
SCARB1-204ENST00000535005 AADACP22760 399 aa9.98□□□□□ -0.81
SCARB1-204ENST00000535005 UBE2E1P51965 193 aa9.98□□□□□ -0.81
SCARB1-204ENST00000535005 ZNF134P52741 427 aa9.98□□□□□ -0.81
SCARB1-204ENST00000535005 PRRX1P54821 245 aa9.98□□□□□ -0.81
SCARB1-204ENST00000535005 FXYD4P59646 89 aa9.98□□□□□ -0.81
SCARB1-204ENST00000535005 GFI1BQ5VTD9 330 aa9.98□□□□□ -0.81
SCARB1-204ENST00000535005 LEAP2Q969E1 77 aa9.98□□□□□ -0.81
SCARB1-204ENST00000535005 TMEM68Q96MH6 324 aa9.98□□□□□ -0.81
SCARB1-204ENST00000535005 TP53RKQ96S44 253 aa9.98□□□□□ -0.81
SCARB1-204ENST00000535005 A0A1B0GV50 99 aa9.97□□□□□ -0.81
SCARB1-204ENST00000535005 ODF3BA8MYP8 253 aa9.97□□□□□ -0.81
SCARB1-204ENST00000535005 AVPP01185 164 aa9.97□□□□□ -0.81
SCARB1-204ENST00000535005 GZMBP10144 247 aa9.97□□□□□ -0.81
SCARB1-204ENST00000535005 CD99P14209 185 aa9.97□□□□□ -0.81
SCARB1-204ENST00000535005 RAB7AP51149 207 aa9.97□□□□□ -0.81
SCARB1-204ENST00000535005 DYNLT3P51808 116 aa9.97□□□□□ -0.81
SCARB1-204ENST00000535005 DLX1P56177 255 aa9.97□□□□□ -0.81
SCARB1-204ENST00000535005 SERF2P84101 59 aa9.97□□□□□ -0.81
SCARB1-204ENST00000535005 RELQ04864 619 aaPredicted RBP9.97□□□□□ -0.81
SCARB1-204ENST00000535005 NMSQ5H8A3 153 aa9.97□□□□□ -0.81
SCARB1-204ENST00000535005 SELENOHQ8IZQ5 122 aaKnown RBP9.97□□□□□ -0.81
SCARB1-204ENST00000535005 PNKDQ8N490 385 aa9.97□□□□□ -0.81
SCARB1-204ENST00000535005 RAB40CQ96S21 281 aa9.97□□□□□ -0.81
SCARB1-204ENST00000535005 ABHD14AQ9BUJ0 271 aa9.97□□□□□ -0.81
SCARB1-204ENST00000535005 KCNS2Q9ULS6 477 aa9.97□□□□□ -0.81
SCARB1-204ENST00000535005 GAB2Q9UQC2 676 aa9.97□□□□□ -0.81
SCARB1-204ENST00000535005 ZNF469Q96JG9 3925 aaPredicted RBP9.96□□□□□ -0.81
SCARB1-204ENST00000535005 CENPVL3A0A0U1RRI6 287 aa9.96□□□□□ -0.81
SCARB1-204ENST00000535005 SSSCA1O60232 199 aa9.96□□□□□ -0.81
SCARB1-204ENST00000535005 FSHBP01225 129 aa9.96□□□□□ -0.81
SCARB1-204ENST00000535005 AMBPP02760 352 aa9.96□□□□□ -0.81
SCARB1-204ENST00000535005 COX7A1P24310 79 aa9.96□□□□□ -0.81
SCARB1-204ENST00000535005 CEBPGP53567 150 aa9.96□□□□□ -0.81
SCARB1-204ENST00000535005 FAM3BP58499 235 aaPredicted RBP9.96□□□□□ -0.81
SCARB1-204ENST00000535005 MSMO1Q15800 293 aa9.96□□□□□ -0.81
SCARB1-204ENST00000535005 ACOT6Q3I5F7 207 aaPredicted RBP9.96□□□□□ -0.81
SCARB1-204ENST00000535005 C1orf229Q6ZS94 237 aaPredicted RBP9.96□□□□□ -0.81
SCARB1-204ENST00000535005 CENPVQ7Z7K6 275 aaPredicted RBP9.96□□□□□ -0.81
SCARB1-204ENST00000535005 LHX4Q969G2 390 aa9.96□□□□□ -0.81
SCARB1-204ENST00000535005 PINX1Q96BK5 328 aaKnown RBP9.96□□□□□ -0.81
SCARB1-204ENST00000535005 MISP3Q96FF7 219 aa9.96□□□□□ -0.81
SCARB1-204ENST00000535005 IFI27L2Q9H2X8 130 aa9.96□□□□□ -0.81
SCARB1-204ENST00000535005 PRO1933Q9H354 126 aa9.96□□□□□ -0.81
SCARB1-204ENST00000535005 NAT8Q9UHE5 227 aa9.96□□□□□ -0.81
SCARB1-204ENST00000535005 MAST4O15021 2626 aa9.96□□□□□ -0.82
SCARB1-204ENST00000535005 IGKV1D-13A0A0B4J2D9 117 aa9.96□□□□□ -0.82
SCARB1-204ENST00000535005 IGHV3-7P01780 117 aa9.96□□□□□ -0.82
SCARB1-204ENST00000535005 IGKV1-13P0DP09 117 aa9.96□□□□□ -0.82
SCARB1-204ENST00000535005 S100GP29377 79 aa9.96□□□□□ -0.82
SCARB1-204ENST00000535005 GNG10P50151 68 aa9.96□□□□□ -0.82
SCARB1-204ENST00000535005 ZNF137PP52743 207 aa9.96□□□□□ -0.82
SCARB1-204ENST00000535005 RAB11AP62491 216 aa9.96□□□□□ -0.82
SCARB1-204ENST00000535005 KLRD1Q13241 179 aa9.96□□□□□ -0.82
SCARB1-204ENST00000535005 HLA-DRB5Q30154 266 aa9.96□□□□□ -0.82
SCARB1-204ENST00000535005 CYP2G1PQ6ZSU1 146 aa9.96□□□□□ -0.82
SCARB1-204ENST00000535005 TEX29Q8N6K0 151 aa9.96□□□□□ -0.82
SCARB1-204ENST00000535005 OR4X1Q8NH49 305 aa9.96□□□□□ -0.82
SCARB1-204ENST00000535005 TMEM18Q96B42 140 aa9.96□□□□□ -0.82
SCARB1-204ENST00000535005 IGHV1-69DA0A0B4J2H0 117 aa9.95□□□□□ -0.82
SCARB1-204ENST00000535005 H0Y980 276 aa9.95□□□□□ -0.82
SCARB1-204ENST00000535005 M0QZK8 103 aa9.95□□□□□ -0.82
SCARB1-204ENST00000535005 GGCTO75223 188 aaKnown RBP9.95□□□□□ -0.82
SCARB1-204ENST00000535005 IGHV1-69P01742 117 aa9.95□□□□□ -0.82
SCARB1-204ENST00000535005 BPIFB3P59826 476 aa9.95□□□□□ -0.82
SCARB1-204ENST00000535005 PRB3Q04118 309 aaPredicted RBP9.95□□□□□ -0.82
SCARB1-204ENST00000535005 IQCJQ1A5X6 159 aa9.95□□□□□ -0.82
SCARB1-204ENST00000535005 KLF17Q5JT82 389 aaPredicted RBP9.95□□□□□ -0.82
SCARB1-204ENST00000535005 MINOS1Q5TGZ0 78 aa9.95□□□□□ -0.82
SCARB1-204ENST00000535005 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.95□□□□□ -0.82
SCARB1-204ENST00000535005 OR4P4Q8NGL7 312 aa9.95□□□□□ -0.82
SCARB1-204ENST00000535005 SCGB1C1Q8TD33 95 aa9.95□□□□□ -0.82
SCARB1-204ENST00000535005 TMEM170AQ8WVE7 144 aa9.95□□□□□ -0.82
SCARB1-204ENST00000535005 R3HDM4Q96D70 268 aa9.95□□□□□ -0.82
SCARB1-204ENST00000535005 GNG13Q9P2W3 67 aa9.95□□□□□ -0.82
SCARB1-204ENST00000535005 AMMECR1Q9Y4X0 333 aaPredicted RBP9.95□□□□□ -0.82
SCARB1-204ENST00000535005 MINOS1-NBL1R4GNA1 71 aa9.95□□□□□ -0.82
SCARB1-204ENST00000535005 TMEM250H0YL14 139 aa9.94□□□□□ -0.82
SCARB1-204ENST00000535005 LY6LH3BQJ8 138 aa9.94□□□□□ -0.82
SCARB1-204ENST00000535005 BUB1B-PAK6H3BSN5 160 aa9.94□□□□□ -0.82
SCARB1-204ENST00000535005 TYMSP04818 313 aa9.94□□□□□ -0.82
SCARB1-204ENST00000535005 PFN1P07737 140 aaKnown RBP9.94□□□□□ -0.82
SCARB1-204ENST00000535005 USF2Q15853 346 aaPredicted RBP9.94□□□□□ -0.82
SCARB1-204ENST00000535005 PDZD11Q5EBL8 140 aa9.94□□□□□ -0.82
SCARB1-204ENST00000535005 TBC1D26Q86UD7 250 aa9.94□□□□□ -0.82
SCARB1-204ENST00000535005 ODF3L1Q8IXM7 274 aa9.94□□□□□ -0.82
SCARB1-204ENST00000535005 ST6GALNAC6Q969X2 333 aa9.94□□□□□ -0.82
SCARB1-204ENST00000535005 OR5B12Q96R08 314 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms