RNA–Protein interactions for RNA: ENST00000534633.5

USF1-211, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 610 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-211ENST00000534633 C19orf35Q6ZS72 473 aa9.51□□□□□ -0.89
USF1-211ENST00000534633 CCDC71LQ8N9Z2 235 aa9.51□□□□□ -0.89
USF1-211ENST00000534633 S100ZQ8WXG8 99 aa9.51□□□□□ -0.89
USF1-211ENST00000534633 GALNT14Q96FL9 552 aa9.51□□□□□ -0.89
USF1-211ENST00000534633 PHB2Q99623 299 aa9.51□□□□□ -0.89
USF1-211ENST00000534633 CCDC32Q9BV29 185 aa9.51□□□□□ -0.89
USF1-211ENST00000534633 PRR13Q9NZ81 148 aa9.51□□□□□ -0.89
USF1-211ENST00000534633 A0A0B4J293 547 aa9.5□□□□□ -0.89
USF1-211ENST00000534633 IZUMO1RA6ND01 250 aa9.5□□□□□ -0.89
USF1-211ENST00000534633 NAP1L6A6NFF2 107 aa9.5□□□□□ -0.89
USF1-211ENST00000534633 FAM223BA6NKX1 122 aa9.5□□□□□ -0.89
USF1-211ENST00000534633 FGF2P09038 288 aa9.5□□□□□ -0.89
USF1-211ENST00000534633 AREGP15514 252 aa9.5□□□□□ -0.89
USF1-211ENST00000534633 AKR1C4P17516 323 aa9.5□□□□□ -0.89
USF1-211ENST00000534633 RPL27AP46776 148 aaKnown RBP9.5□□□□□ -0.89
USF1-211ENST00000534633 TMEM187Q14656 261 aa9.5□□□□□ -0.89
USF1-211ENST00000534633 FAM223AQ8IWN6 122 aa9.5□□□□□ -0.89
USF1-211ENST00000534633 SELENOHQ8IZQ5 122 aaKnown RBP9.5□□□□□ -0.89
USF1-211ENST00000534633 TTC9CQ8N5M4 171 aa9.5□□□□□ -0.89
USF1-211ENST00000534633 IL17DQ8TAD2 202 aa9.5□□□□□ -0.89
USF1-211ENST00000534633 TMEM56Q96MV1 263 aa9.5□□□□□ -0.89
USF1-211ENST00000534633 SCGB3A2Q96PL1 93 aa9.5□□□□□ -0.89
USF1-211ENST00000534633 SLC25A21Q9BQT8 299 aaPredicted RBP9.5□□□□□ -0.89
USF1-211ENST00000534633 TBC1D24Q9ULP9 559 aa9.5□□□□□ -0.89
USF1-211ENST00000534633 FLVCR2Q9UPI3 526 aa9.5□□□□□ -0.89
USF1-211ENST00000534633 TMEM56-RWDD3S4R434 201 aa9.5□□□□□ -0.89
USF1-211ENST00000534633 IGLC7A0M8Q6 106 aa9.49□□□□□ -0.89
USF1-211ENST00000534633 CREBL2O60519 120 aaPredicted RBP9.49□□□□□ -0.89
USF1-211ENST00000534633 B3GALNT1O75752 331 aa9.49□□□□□ -0.89
USF1-211ENST00000534633 ACTL6BO94805 426 aa9.49□□□□□ -0.89
USF1-211ENST00000534633 NDUFB6O95139 128 aa9.49□□□□□ -0.89
USF1-211ENST00000534633 PRH1P02810 166 aa9.49□□□□□ -0.89
USF1-211ENST00000534633 CRYGCP07315 174 aa9.49□□□□□ -0.89
USF1-211ENST00000534633 INPP1P49441 399 aa9.49□□□□□ -0.89
USF1-211ENST00000534633 ERVK-16P61578 105 aa9.49□□□□□ -0.89
USF1-211ENST00000534633 RHOGP84095 191 aa9.49□□□□□ -0.89
USF1-211ENST00000534633 EXOSC2Q13868 293 aaKnown RBP9.49□□□□□ -0.89
USF1-211ENST00000534633 LINC00322Q6ZN03 302 aaPredicted RBP9.49□□□□□ -0.89
USF1-211ENST00000534633 OR10W1Q8NGF6 305 aa9.49□□□□□ -0.89
USF1-211ENST00000534633 FYTTD1Q96QD9 318 aaKnown RBP9.49□□□□□ -0.89
USF1-211ENST00000534633 SPIN2AQ99865 258 aa9.49□□□□□ -0.89
USF1-211ENST00000534633 SPIN2BQ9BPZ2 258 aa9.49□□□□□ -0.89
USF1-211ENST00000534633 C7orf50Q9BRJ6 194 aaKnown RBP9.49□□□□□ -0.89
USF1-211ENST00000534633 NDUFA4L2Q9NRX3 87 aa9.49□□□□□ -0.89
USF1-211ENST00000534633 TMEM14BQ9NUH8 114 aa9.49□□□□□ -0.89
USF1-211ENST00000534633 DMRT1Q9Y5R6 373 aa9.49□□□□□ -0.89
USF1-211ENST00000534633 TRBV9A0A0B4J1U6 114 aa9.48□□□□□ -0.89
USF1-211ENST00000534633 BMPR1BO00238 502 aa9.48□□□□□ -0.89
USF1-211ENST00000534633 LYRM1O43325 122 aa9.48□□□□□ -0.89
USF1-211ENST00000534633 JTBO76095 146 aa9.48□□□□□ -0.89
USF1-211ENST00000534633 CD81P60033 236 aa9.48□□□□□ -0.89
USF1-211ENST00000534633 WT1-ASQ06250 92 aa9.48□□□□□ -0.89
USF1-211ENST00000534633 ZNF846Q147U1 533 aa9.48□□□□□ -0.89
USF1-211ENST00000534633 RBMS2Q15434 407 aaKnown RBP9.48□□□□□ -0.89
USF1-211ENST00000534633 KLK9Q2XQG4 91 aa9.48□□□□□ -0.89
USF1-211ENST00000534633 TRIM16LQ309B1 348 aa9.48□□□□□ -0.89
USF1-211ENST00000534633 TMEM128Q5BJH2 165 aa9.48□□□□□ -0.89
USF1-211ENST00000534633 FAM209BQ5JX69 171 aa9.48□□□□□ -0.89
USF1-211ENST00000534633 H2BFWTQ7Z2G1 175 aa9.48□□□□□ -0.89
USF1-211ENST00000534633 TMED4Q7Z7H5 227 aa9.48□□□□□ -0.89
USF1-211ENST00000534633 SLC25A42Q86VD7 318 aa9.48□□□□□ -0.89
USF1-211ENST00000534633 FANCD2OSQ96PS1 177 aa9.48□□□□□ -0.89
USF1-211ENST00000534633 NEURL2Q9BR09 285 aa9.48□□□□□ -0.89
USF1-211ENST00000534633 HIPK2Q9H2X6 1198 aa9.48□□□□□ -0.89
USF1-211ENST00000534633 PLEKHA3Q9HB20 300 aa9.48□□□□□ -0.89
USF1-211ENST00000534633 KLK9Q9UKQ9 250 aa9.48□□□□□ -0.89
USF1-211ENST00000534633 OR51B2Q9Y5P1 312 aa9.48□□□□□ -0.89
USF1-211ENST00000534633 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.47□□□□□ -0.89
USF1-211ENST00000534633 C15orf61A6NNL5 157 aa9.47□□□□□ -0.89
USF1-211ENST00000534633 NPIPB5A8MRT5 1133 aa9.47□□□□□ -0.89
USF1-211ENST00000534633 UPK1BO75841 260 aa9.47□□□□□ -0.89
USF1-211ENST00000534633 REG1AP05451 166 aa9.47□□□□□ -0.89
USF1-211ENST00000534633 TRAPPC2P0DI81 140 aa9.47□□□□□ -0.89
USF1-211ENST00000534633 TRAPPC2BP0DI82 140 aa9.47□□□□□ -0.89
USF1-211ENST00000534633 CTRB1P17538 263 aa9.47□□□□□ -0.89
USF1-211ENST00000534633 PSMB6P28072 239 aa9.47□□□□□ -0.89
USF1-211ENST00000534633 ATP5G2Q06055 141 aa9.47□□□□□ -0.89
USF1-211ENST00000534633 PPP1R1AQ13522 171 aa9.47□□□□□ -0.89
USF1-211ENST00000534633 ANKRD55Q3KP44 614 aa9.47□□□□□ -0.89
USF1-211ENST00000534633 CD300EQ496F6 205 aaPredicted RBP9.47□□□□□ -0.89
USF1-211ENST00000534633 TMEM268Q5VZI3 342 aa9.47□□□□□ -0.89
USF1-211ENST00000534633 CTRB2Q6GPI1 263 aa9.47□□□□□ -0.89
USF1-211ENST00000534633 LYZL2Q7Z4W2 148 aa9.47□□□□□ -0.89
USF1-211ENST00000534633 RBPMSQ93062 196 aaKnown RBP9.47□□□□□ -0.89
USF1-211ENST00000534633 GPR146Q96CH1 333 aa9.47□□□□□ -0.89
USF1-211ENST00000534633 QTRT1Q9BXR0 403 aaKnown RBP9.47□□□□□ -0.89
USF1-211ENST00000534633 WDR12Q9GZL7 423 aaKnown RBP9.47□□□□□ -0.89
USF1-211ENST00000534633 COMMD5Q9GZQ3 224 aa9.47□□□□□ -0.89
USF1-211ENST00000534633 RETNQ9HD89 108 aa9.47□□□□□ -0.89
USF1-211ENST00000534633 PRNDQ9UKY0 176 aa9.47□□□□□ -0.89
USF1-211ENST00000534633 KCNIP3Q9Y2W7 256 aa9.47□□□□□ -0.89
USF1-211ENST00000534633 ZNF785A8K8V0 405 aa9.46□□□□□ -0.9
USF1-211ENST00000534633 CENPXA8MT69 81 aa9.46□□□□□ -0.9
USF1-211ENST00000534633 SNAPC5O75971 98 aa9.46□□□□□ -0.9
USF1-211ENST00000534633 ANXA7P20073 488 aaKnown RBP9.46□□□□□ -0.9
USF1-211ENST00000534633 HSPE1P61604 102 aaKnown RBP9.46□□□□□ -0.9
USF1-211ENST00000534633 AARDQ4LEZ3 155 aa9.46□□□□□ -0.9
USF1-211ENST00000534633 CENPSQ8N2Z9 138 aa9.46□□□□□ -0.9
USF1-211ENST00000534633 SLC35G3Q8N808 338 aa9.46□□□□□ -0.9
USF1-211ENST00000534633 NECAP1Q8NC96 275 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms