RNA–Protein interactions for RNA: ENST00000534442.5

ECHDC1-223, Transcript of ethylmalonyl-CoA decarboxylase 1, human

TSL 5

Gene ECHDC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ECHDC1-223	ENST00000534442	BCAP31	P51572	246 aa		2.73	□□□□□ -1.97
ECHDC1-223	ENST00000534442	PRR3	P79522	188 aa	Known RBP	2.73	□□□□□ -1.97
ECHDC1-223	ENST00000534442	EBI3	Q14213	229 aa		2.73	□□□□□ -1.97
ECHDC1-223	ENST00000534442	RGN	Q15493	299 aa		2.73	□□□□□ -1.97
ECHDC1-223	ENST00000534442	DEFB114	Q30KQ6	69 aa		2.73	□□□□□ -1.97
ECHDC1-223	ENST00000534442	ZNF660	Q6AZW8	331 aa	Predicted RBP	2.73	□□□□□ -1.97
ECHDC1-223	ENST00000534442		Q6ZRN7	208 aa	Predicted RBP	2.73	□□□□□ -1.97
ECHDC1-223	ENST00000534442	SCX	Q7RTU7	201 aa		2.73	□□□□□ -1.97
ECHDC1-223	ENST00000534442	SH2D6	Q7Z4S9	175 aa		2.73	□□□□□ -1.97
ECHDC1-223	ENST00000534442	PCP2	Q8IVA1	136 aa		2.73	□□□□□ -1.97
ECHDC1-223	ENST00000534442	LRRC34	Q8IZ02	419 aa		2.73	□□□□□ -1.97
ECHDC1-223	ENST00000534442	C4orf33	Q8N1A6	199 aa		2.73	□□□□□ -1.97
ECHDC1-223	ENST00000534442	C15orf56	Q8N910	161 aa		2.73	□□□□□ -1.97
ECHDC1-223	ENST00000534442	C11orf72	Q8NBR9	251 aa		2.73	□□□□□ -1.97
ECHDC1-223	ENST00000534442	DYNLRB2	Q8TF09	96 aa		2.73	□□□□□ -1.97
ECHDC1-223	ENST00000534442	HDHD2	Q9H0R4	259 aa		2.73	□□□□□ -1.97
ECHDC1-223	ENST00000534442	CACYBP	Q9HB71	228 aa	Known RBP	2.73	□□□□□ -1.97
ECHDC1-223	ENST00000534442	ZNF229	Q9UJW7	825 aa		2.73	□□□□□ -1.97
ECHDC1-223	ENST00000534442	IGLV2-33	A0A075B6J2	118 aa	Predicted RBP	2.72	□□□□□ -1.97
ECHDC1-223	ENST00000534442		A0A087WTM6	91 aa		2.72	□□□□□ -1.97
ECHDC1-223	ENST00000534442	IGHV3-66	A0A0C4DH42	116 aa		2.72	□□□□□ -1.97
ECHDC1-223	ENST00000534442		A0A1B0GVX0	72 aa		2.72	□□□□□ -1.97
ECHDC1-223	ENST00000534442	hADV38S2	A0JD32	116 aa		2.72	□□□□□ -1.97
ECHDC1-223	ENST00000534442		A6NDN8	102 aa		2.72	□□□□□ -1.97
ECHDC1-223	ENST00000534442	RFPL4A	A6NLU0	287 aa		2.72	□□□□□ -1.97
ECHDC1-223	ENST00000534442		A8MT66	165 aa		2.72	□□□□□ -1.97
ECHDC1-223	ENST00000534442	RFPL4AL1	F8VTS6	287 aa		2.72	□□□□□ -1.97
ECHDC1-223	ENST00000534442	INS-IGF2	F8WCM5	200 aa		2.72	□□□□□ -1.97
ECHDC1-223	ENST00000534442		H7C1H1	209 aa		2.72	□□□□□ -1.97
ECHDC1-223	ENST00000534442	NME4	O00746	187 aa		2.72	□□□□□ -1.97
ECHDC1-223	ENST00000534442	GABARAP	O95166	117 aa		2.72	□□□□□ -1.97
ECHDC1-223	ENST00000534442	IGLV2-8	P01709	118 aa		2.72	□□□□□ -1.97
ECHDC1-223	ENST00000534442	CRYGC	P07315	174 aa		2.72	□□□□□ -1.97
ECHDC1-223	ENST00000534442	ASAH2B	P0C7U1	165 aa		2.72	□□□□□ -1.97
ECHDC1-223	ENST00000534442	PRKACA	P17612	351 aa		2.72	□□□□□ -1.97
ECHDC1-223	ENST00000534442	EDDM3B	P56851	147 aa		2.72	□□□□□ -1.97
ECHDC1-223	ENST00000534442	MEF2C	Q06413	473 aa	Predicted RBP	2.72	□□□□□ -1.97
ECHDC1-223	ENST00000534442	RPL18	Q07020	188 aa	Known RBP	2.72	□□□□□ -1.97
ECHDC1-223	ENST00000534442	CDK5R1	Q15078	307 aa		2.72	□□□□□ -1.97
ECHDC1-223	ENST00000534442		Q6ZSA8	131 aa		2.72	□□□□□ -1.97
ECHDC1-223	ENST00000534442	MRPL55	Q7Z7F7	128 aa	Known RBP	2.72	□□□□□ -1.97
ECHDC1-223	ENST00000534442		Q8N6K4	173 aa		2.72	□□□□□ -1.97
ECHDC1-223	ENST00000534442	INO80E	Q8NBZ0	244 aa	Predicted RBP	2.72	□□□□□ -1.97
ECHDC1-223	ENST00000534442	CHST4	Q8NCG5	386 aa		2.72	□□□□□ -1.97
ECHDC1-223	ENST00000534442	OR51E1	Q8TCB6	317 aa		2.72	□□□□□ -1.97
ECHDC1-223	ENST00000534442	LINC01600	Q96MT4	127 aa		2.72	□□□□□ -1.97
ECHDC1-223	ENST00000534442	SLC25A39	Q9BZJ4	359 aa	Predicted RBP	2.72	□□□□□ -1.97
ECHDC1-223	ENST00000534442	SAV1	Q9H4B6	383 aa	Predicted RBP	2.72	□□□□□ -1.97
ECHDC1-223	ENST00000534442	INIP	Q9NRY2	104 aa		2.72	□□□□□ -1.97
ECHDC1-223	ENST00000534442	RASL12	Q9NYN1	266 aa		2.72	□□□□□ -1.97
ECHDC1-223	ENST00000534442	MTFP1	Q9UDX5	166 aa		2.72	□□□□□ -1.97
ECHDC1-223	ENST00000534442		A0A0B4J2E0	115 aa		2.71	□□□□□ -1.98
ECHDC1-223	ENST00000534442		A0A1B0GX12	115 aa		2.71	□□□□□ -1.98
ECHDC1-223	ENST00000534442	TMEM210	A6NLX4	147 aa		2.71	□□□□□ -1.98
ECHDC1-223	ENST00000534442		F5H5K5	113 aa		2.71	□□□□□ -1.98
ECHDC1-223	ENST00000534442	ZNF701	M0R085	212 aa	Predicted RBP	2.71	□□□□□ -1.98
ECHDC1-223	ENST00000534442	GABRP	O00591	440 aa		2.71	□□□□□ -1.98
ECHDC1-223	ENST00000534442	OR5F1	O95221	314 aa		2.71	□□□□□ -1.98
ECHDC1-223	ENST00000534442	BCHE	P06276	602 aa		2.71	□□□□□ -1.98
ECHDC1-223	ENST00000534442	CD3G	P09693	182 aa		2.71	□□□□□ -1.98
ECHDC1-223	ENST00000534442	RAB7A	P51149	207 aa		2.71	□□□□□ -1.98
ECHDC1-223	ENST00000534442	ZNF121	P58317	390 aa	Predicted RBP	2.71	□□□□□ -1.98
ECHDC1-223	ENST00000534442	LSM6	P62312	80 aa	Known RBP	2.71	□□□□□ -1.98
ECHDC1-223	ENST00000534442	RPL38	P63173	70 aa	Known RBP	2.71	□□□□□ -1.98
ECHDC1-223	ENST00000534442	GINS1	Q14691	196 aa		2.71	□□□□□ -1.98
ECHDC1-223	ENST00000534442	SMIM21	Q3B7S5	101 aa		2.71	□□□□□ -1.98
ECHDC1-223	ENST00000534442	TTC32	Q5I0X7	151 aa		2.71	□□□□□ -1.98
ECHDC1-223	ENST00000534442	GCSAML	Q5JQS6	135 aa		2.71	□□□□□ -1.98
ECHDC1-223	ENST00000534442	LCE3E	Q5T5B0	92 aa		2.71	□□□□□ -1.98
ECHDC1-223	ENST00000534442	METTL21C	Q5VZV1	264 aa		2.71	□□□□□ -1.98
ECHDC1-223	ENST00000534442	TCF23	Q7RTU1	214 aa		2.71	□□□□□ -1.98
ECHDC1-223	ENST00000534442	CTAGE3P	Q8IX95	158 aa		2.71	□□□□□ -1.98
ECHDC1-223	ENST00000534442	RIMKLA	Q8IXN7	391 aa		2.71	□□□□□ -1.98
ECHDC1-223	ENST00000534442	CLECL1	Q8IZS7	167 aa		2.71	□□□□□ -1.98
ECHDC1-223	ENST00000534442	TCTEX1D1	Q8N7M0	179 aa		2.71	□□□□□ -1.98
ECHDC1-223	ENST00000534442	FAM86B1	Q8N7N1	296 aa		2.71	□□□□□ -1.98
ECHDC1-223	ENST00000534442		Q8NAQ8	132 aa		2.71	□□□□□ -1.98
ECHDC1-223	ENST00000534442	FBXO36	Q8NEA4	188 aa		2.71	□□□□□ -1.98
ECHDC1-223	ENST00000534442	OR4A15	Q8NGL6	344 aa		2.71	□□□□□ -1.98
ECHDC1-223	ENST00000534442	OR2T10	Q8NGZ9	312 aa		2.71	□□□□□ -1.98
ECHDC1-223	ENST00000534442	OR2AE1	Q8NHA4	323 aa		2.71	□□□□□ -1.98
ECHDC1-223	ENST00000534442	CASTOR1	Q8WTX7	329 aa		2.71	□□□□□ -1.98
ECHDC1-223	ENST00000534442	FAM104A	Q969W3	186 aa		2.71	□□□□□ -1.98
ECHDC1-223	ENST00000534442	MAGOHB	Q96A72	148 aa	Known RBP	2.71	□□□□□ -1.98
ECHDC1-223	ENST00000534442	NRBF2	Q96F24	287 aa		2.71	□□□□□ -1.98
ECHDC1-223	ENST00000534442	MRPL57	Q9BQC6	102 aa	Known RBP	2.71	□□□□□ -1.98
ECHDC1-223	ENST00000534442	RTL8A	Q9BWD3	113 aa		2.71	□□□□□ -1.98
ECHDC1-223	ENST00000534442	PARP12	Q9H0J9	701 aa	Known RBP	2.71	□□□□□ -1.98
ECHDC1-223	ENST00000534442	IFI27L2	Q9H2X8	130 aa		2.71	□□□□□ -1.98
ECHDC1-223	ENST00000534442	RPP21	Q9H633	154 aa	Known RBP	2.71	□□□□□ -1.98
ECHDC1-223	ENST00000534442	TMEM27	Q9HBJ8	222 aa		2.71	□□□□□ -1.98
ECHDC1-223	ENST00000534442	CALML5	Q9NZT1	146 aa		2.71	□□□□□ -1.98
ECHDC1-223	ENST00000534442	MARCO	Q9UEW3	520 aa	Predicted RBP	2.71	□□□□□ -1.98
ECHDC1-223	ENST00000534442	ANGPT4	Q9Y264	503 aa		2.71	□□□□□ -1.98
ECHDC1-223	ENST00000534442	ERGIC3	Q9Y282	383 aa		2.71	□□□□□ -1.98
ECHDC1-223	ENST00000534442	AMMECR1	Q9Y4X0	333 aa	Predicted RBP	2.71	□□□□□ -1.98
ECHDC1-223	ENST00000534442	LINC00312	Q9Y6C7	94 aa		2.71	□□□□□ -1.98
ECHDC1-223	ENST00000534442	FAM159B	A6NKW6	160 aa		2.7	□□□□□ -1.98
ECHDC1-223	ENST00000534442	XRCC2	O43543	280 aa		2.7	□□□□□ -1.98
ECHDC1-223	ENST00000534442	HPRT1	P00492	218 aa		2.7	□□□□□ -1.98

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