RNA–Protein interactions for RNA: ENST00000533774.5

SVIP-205, Transcript of small VCP interacting protein, humanhuman

TSL 3

Gene SVIP, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-205ENST00000533774 TMEM14BQ9NUH8 114 aa8.73□□□□□ -1.01
SVIP-205ENST00000533774 TRAV14DV4A0A0A6YYC5 116 aa8.72□□□□□ -1.01
SVIP-205ENST00000533774 TEX50A0A1B0GTY4 177 aa8.72□□□□□ -1.01
SVIP-205ENST00000533774 TNFSF12O43508 249 aa8.72□□□□□ -1.01
SVIP-205ENST00000533774 YIF1AO95070 293 aa8.72□□□□□ -1.01
SVIP-205ENST00000533774 SPP1P10451 314 aa8.72□□□□□ -1.01
SVIP-205ENST00000533774 KRTAP10-2P60368 255 aa8.72□□□□□ -1.01
SVIP-205ENST00000533774 PAFAH1B2P68402 229 aa8.72□□□□□ -1.01
SVIP-205ENST00000533774 TMEM41BQ5BJD5 291 aa8.72□□□□□ -1.01
SVIP-205ENST00000533774 LIPKQ5VXJ0 399 aa8.72□□□□□ -1.01
SVIP-205ENST00000533774 TMEM91Q6ZNR0 172 aa8.72□□□□□ -1.01
SVIP-205ENST00000533774 MS4A15Q8N5U1 240 aa8.72□□□□□ -1.01
SVIP-205ENST00000533774 OR10R2Q8NGX6 335 aa8.72□□□□□ -1.01
SVIP-205ENST00000533774 CMTM3Q96MX0 182 aa8.72□□□□□ -1.01
SVIP-205ENST00000533774 SRSF8Q9BRL6 282 aaKnown RBP8.72□□□□□ -1.01
SVIP-205ENST00000533774 F11RQ9Y624 299 aaKnown RBP8.72□□□□□ -1.01
SVIP-205ENST00000533774 EPM2AB3EWF7 344 aa8.71□□□□□ -1.02
SVIP-205ENST00000533774 DNASE2O00115 360 aaPredicted RBP8.71□□□□□ -1.02
SVIP-205ENST00000533774 MYL12BO14950 172 aa8.71□□□□□ -1.02
SVIP-205ENST00000533774 HIST1H1DP16402 221 aaKnown RBP8.71□□□□□ -1.02
SVIP-205ENST00000533774 NPY1RP25929 384 aa8.71□□□□□ -1.02
SVIP-205ENST00000533774 POU2AF1Q16633 256 aa8.71□□□□□ -1.02
SVIP-205ENST00000533774 UBE2UQ5VVX9 321 aa8.71□□□□□ -1.02
SVIP-205ENST00000533774 COMMD5Q9GZQ3 224 aa8.71□□□□□ -1.02
SVIP-205ENST00000533774 SMPD3Q9NY59 655 aaPredicted RBP8.71□□□□□ -1.02
SVIP-205ENST00000533774 RAB22AQ9UL26 194 aa8.71□□□□□ -1.02
SVIP-205ENST00000533774 TRAV2A0A0B4J234 112 aa8.7□□□□□ -1.02
SVIP-205ENST00000533774 K7EQG2 157 aa8.7□□□□□ -1.02
SVIP-205ENST00000533774 ST8SIA3O43173 380 aa8.7□□□□□ -1.02
SVIP-205ENST00000533774 SLC22A5O76082 557 aa8.7□□□□□ -1.02
SVIP-205ENST00000533774 IGHV3-48P01763 117 aa8.7□□□□□ -1.02
SVIP-205ENST00000533774 TRAPPC2P0DI81 140 aa8.7□□□□□ -1.02
SVIP-205ENST00000533774 TRAPPC2BP0DI82 140 aa8.7□□□□□ -1.02
SVIP-205ENST00000533774 HES5Q5TA89 166 aa8.7□□□□□ -1.02
SVIP-205ENST00000533774 ZNF66Q6ZN08 573 aa8.7□□□□□ -1.02
SVIP-205ENST00000533774 AHSA2Q719I0 299 aa8.7□□□□□ -1.02
SVIP-205ENST00000533774 SPAG16Q8N0X2 631 aa8.7□□□□□ -1.02
SVIP-205ENST00000533774 C6orf223Q8N319 242 aa8.7□□□□□ -1.02
SVIP-205ENST00000533774 ZNF555Q8NEP9 628 aa8.7□□□□□ -1.02
SVIP-205ENST00000533774 NXF2Q9GZY0 626 aaKnown RBP8.7□□□□□ -1.02
SVIP-205ENST00000533774 CCL28Q9NRJ3 127 aa8.7□□□□□ -1.02
SVIP-205ENST00000533774 NDUFA4L2Q9NRX3 87 aa8.7□□□□□ -1.02
SVIP-205ENST00000533774 TMEM140Q9NV12 185 aa8.7□□□□□ -1.02
SVIP-205ENST00000533774 RABAC1Q9UI14 185 aa8.7□□□□□ -1.02
SVIP-205ENST00000533774 PSORS1C1Q9UIG5 152 aa8.7□□□□□ -1.02
SVIP-205ENST00000533774 CIB2O75838 187 aa8.69□□□□□ -1.02
SVIP-205ENST00000533774 ZNF688P0C7X2 276 aa8.69□□□□□ -1.02
SVIP-205ENST00000533774 RELQ04864 619 aaPredicted RBP8.69□□□□□ -1.02
SVIP-205ENST00000533774 SSX1Q16384 188 aa8.69□□□□□ -1.02
SVIP-205ENST00000533774 ACTL10Q5JWF8 245 aa8.69□□□□□ -1.02
SVIP-205ENST00000533774 TOMM20LQ6UXN7 152 aa8.69□□□□□ -1.02
SVIP-205ENST00000533774 DUSP18Q8NEJ0 188 aa8.69□□□□□ -1.02
SVIP-205ENST00000533774 TMEM203Q969S6 136 aa8.69□□□□□ -1.02
SVIP-205ENST00000533774 FAM210BQ96KR6 192 aa8.69□□□□□ -1.02
SVIP-205ENST00000533774 LSM2Q9Y333 95 aaKnown RBP8.69□□□□□ -1.02
SVIP-205ENST00000533774 NBDYA0A0U1RRE5 68 aa8.68□□□□□ -1.02
SVIP-205ENST00000533774 I3L2K1 104 aa8.68□□□□□ -1.02
SVIP-205ENST00000533774 SULT1C2O00338 296 aa8.68□□□□□ -1.02
SVIP-205ENST00000533774 DTYMKP23919 212 aa8.68□□□□□ -1.02
SVIP-205ENST00000533774 TALDO1P37837 337 aa8.68□□□□□ -1.02
SVIP-205ENST00000533774 TAS2R31P59538 309 aa8.68□□□□□ -1.02
SVIP-205ENST00000533774 RPL11P62913 178 aaKnown RBP8.68□□□□□ -1.02
SVIP-205ENST00000533774 HINT2Q9BX68 163 aa8.68□□□□□ -1.02
SVIP-205ENST00000533774 YTHDF1Q9BYJ9 559 aaKnown RBP8.68□□□□□ -1.02
SVIP-205ENST00000533774 DCSTAMPQ9H295 470 aa8.68□□□□□ -1.02
SVIP-205ENST00000533774 FKBP14Q9NWM8 211 aa8.68□□□□□ -1.02
SVIP-205ENST00000533774 XCL2Q9UBD3 114 aa8.68□□□□□ -1.02
SVIP-205ENST00000533774 CYB5BO43169 146 aa8.67□□□□□ -1.02
SVIP-205ENST00000533774 RBFOX2O43251 390 aaKnown RBP eCLIP8.67□□□□□ -1.02
SVIP-205ENST00000533774 SPART-AS1P0CW21 52 aa8.67□□□□□ -1.02
SVIP-205ENST00000533774 PTHLHP12272 177 aa8.67□□□□□ -1.02
SVIP-205ENST00000533774 HTN3P15516 51 aa8.67□□□□□ -1.02
SVIP-205ENST00000533774 NQO2P16083 231 aa8.67□□□□□ -1.02
SVIP-205ENST00000533774 EMP1P54849 157 aa8.67□□□□□ -1.02
SVIP-205ENST00000533774 RPS25P62851 125 aaKnown RBP8.67□□□□□ -1.02
SVIP-205ENST00000533774 TMEM88Q6PEY1 159 aa8.67□□□□□ -1.02
SVIP-205ENST00000533774 STXBP6Q8NFX7 210 aa8.67□□□□□ -1.02
SVIP-205ENST00000533774 OR1L8Q8NGR8 309 aa8.67□□□□□ -1.02
SVIP-205ENST00000533774 ZNRF2Q8NHG8 242 aa8.67□□□□□ -1.02
SVIP-205ENST00000533774 DCANP1Q8TF63 244 aa8.67□□□□□ -1.02
SVIP-205ENST00000533774 CYGBQ8WWM9 190 aa8.67□□□□□ -1.02
SVIP-205ENST00000533774 SLC25A46Q96AG3 418 aa8.67□□□□□ -1.02
SVIP-205ENST00000533774 GRAMD2BQ96HH9 432 aa8.67□□□□□ -1.02
SVIP-205ENST00000533774 NSG2Q9Y328 171 aa8.67□□□□□ -1.02
SVIP-205ENST00000533774 A0A1B0GU03 582 aa8.66□□□□□ -1.02
SVIP-205ENST00000533774 DBX1A6NMT0 343 aa8.66□□□□□ -1.02
SVIP-205ENST00000533774 HPRT1P00492 218 aa8.66□□□□□ -1.02
SVIP-205ENST00000533774 CD5P06127 495 aa8.66□□□□□ -1.02
SVIP-205ENST00000533774 FGF2P09038 288 aa8.66□□□□□ -1.02
SVIP-205ENST00000533774 GNAO1P09471 354 aa8.66□□□□□ -1.02
SVIP-205ENST00000533774 CTXN2P0C2S0 81 aa8.66□□□□□ -1.02
SVIP-205ENST00000533774 GADD45AP24522 165 aa8.66□□□□□ -1.02
SVIP-205ENST00000533774 MFAP4P55083 255 aa8.66□□□□□ -1.02
SVIP-205ENST00000533774 THOC7Q6I9Y2 204 aaKnown RBP8.66□□□□□ -1.02
SVIP-205ENST00000533774 ZFP1Q6P2D0 407 aa8.66□□□□□ -1.02
SVIP-205ENST00000533774 CNIH2Q6PI25 160 aa8.66□□□□□ -1.02
SVIP-205ENST00000533774 NUDCD2Q8WVJ2 157 aa8.66□□□□□ -1.02
SVIP-205ENST00000533774 SECTM1Q8WVN6 248 aa8.66□□□□□ -1.02
SVIP-205ENST00000533774 LSM10Q969L4 123 aaKnown RBP8.66□□□□□ -1.02
SVIP-205ENST00000533774 RAB40CQ96S21 281 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms