RNA–Protein interactions for RNA: ENST00000533704.1

CAPN1-225, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-225ENST00000533704 C21orf62Q9NYP8 219 aa7.87□□□□□ -1.15
CAPN1-225ENST00000533704 MTFP1Q9UDX5 166 aa7.87□□□□□ -1.15
CAPN1-225ENST00000533704 MLXQ9UH92 298 aa7.87□□□□□ -1.15
CAPN1-225ENST00000533704 KLK9Q9UKQ9 250 aa7.87□□□□□ -1.15
CAPN1-225ENST00000533704 UFC1Q9Y3C8 167 aa7.87□□□□□ -1.15
CAPN1-225ENST00000533704 CEPT1Q9Y6K0 416 aa7.87□□□□□ -1.15
CAPN1-225ENST00000533704 IGHV3OR16-8A0A075B7F1 116 aa7.86□□□□□ -1.15
CAPN1-225ENST00000533704 A8MWP6 167 aa7.86□□□□□ -1.15
CAPN1-225ENST00000533704 CTDSP2O14595 271 aa7.86□□□□□ -1.15
CAPN1-225ENST00000533704 ZNF207O43670 478 aaKnown RBP7.86□□□□□ -1.15
CAPN1-225ENST00000533704 RAB3DO95716 219 aa7.86□□□□□ -1.15
CAPN1-225ENST00000533704 IGKV1-39P01597 117 aa7.86□□□□□ -1.15
CAPN1-225ENST00000533704 IGKV1D-39P04432 117 aa7.86□□□□□ -1.15
CAPN1-225ENST00000533704 LYL1P12980 280 aa7.86□□□□□ -1.15
CAPN1-225ENST00000533704 ALDH3B2P48448 385 aa7.86□□□□□ -1.15
CAPN1-225ENST00000533704 AKR1C2P52895 323 aa7.86□□□□□ -1.15
CAPN1-225ENST00000533704 PIGPP57054 158 aa7.86□□□□□ -1.15
CAPN1-225ENST00000533704 IZUMO4Q1ZYL8 232 aa7.86□□□□□ -1.15
CAPN1-225ENST00000533704 ZFAND6Q6FIF0 208 aa7.86□□□□□ -1.15
CAPN1-225ENST00000533704 RBPMS2Q6ZRY4 209 aaKnown RBP7.86□□□□□ -1.15
CAPN1-225ENST00000533704 SLC16A13Q7RTY0 426 aa7.86□□□□□ -1.15
CAPN1-225ENST00000533704 ARRDC1Q8N5I2 433 aa7.86□□□□□ -1.15
CAPN1-225ENST00000533704 OR4D10Q8NGI6 311 aa7.86□□□□□ -1.15
CAPN1-225ENST00000533704 OR52B4Q8NGK2 314 aa7.86□□□□□ -1.15
CAPN1-225ENST00000533704 SCARB1Q8WTV0 552 aa7.86□□□□□ -1.15
CAPN1-225ENST00000533704 C15orf40Q8WUR7 153 aa7.86□□□□□ -1.15
CAPN1-225ENST00000533704 SEC22AQ96IW7 307 aa7.86□□□□□ -1.15
CAPN1-225ENST00000533704 CITED4Q96RK1 184 aa7.86□□□□□ -1.15
CAPN1-225ENST00000533704 FAM110AQ9BQ89 295 aa7.86□□□□□ -1.15
CAPN1-225ENST00000533704 C20orf24Q9BUV8 137 aa7.86□□□□□ -1.15
CAPN1-225ENST00000533704 SRD5A3Q9H8P0 318 aa7.86□□□□□ -1.15
CAPN1-225ENST00000533704 TMEM14BQ9NUH8 114 aa7.86□□□□□ -1.15
CAPN1-225ENST00000533704 COPZ2Q9P299 210 aa7.86□□□□□ -1.15
CAPN1-225ENST00000533704 IGHV3-48P01763 117 aa7.85□□□□□ -1.15
CAPN1-225ENST00000533704 TAS2R19P59542 299 aa7.85□□□□□ -1.15
CAPN1-225ENST00000533704 TRIM16LQ309B1 348 aa7.85□□□□□ -1.15
CAPN1-225ENST00000533704 FAAP20Q6NZ36 180 aa7.85□□□□□ -1.15
CAPN1-225ENST00000533704 STEAP1BQ6NZ63 245 aa7.85□□□□□ -1.15
CAPN1-225ENST00000533704 CCDC71LQ8N9Z2 235 aa7.85□□□□□ -1.15
CAPN1-225ENST00000533704 TMEM229BQ8NBD8 167 aa7.85□□□□□ -1.15
CAPN1-225ENST00000533704 OR1L6Q8NGR2 347 aa7.85□□□□□ -1.15
CAPN1-225ENST00000533704 OR13C8Q8NGS7 320 aa7.85□□□□□ -1.15
CAPN1-225ENST00000533704 RNASE11Q8TAA1 199 aaKnown RBP7.85□□□□□ -1.15
CAPN1-225ENST00000533704 MARCH1Q8TCQ1 289 aa7.85□□□□□ -1.15
CAPN1-225ENST00000533704 TMEM190Q8WZ59 177 aa7.85□□□□□ -1.15
CAPN1-225ENST00000533704 MARC2Q969Z3 335 aa7.85□□□□□ -1.15
CAPN1-225ENST00000533704 PINX1Q96BK5 328 aaKnown RBP7.85□□□□□ -1.15
CAPN1-225ENST00000533704 ISOC1Q96CN7 298 aa7.85□□□□□ -1.15
CAPN1-225ENST00000533704 BSCL2Q96G97 398 aaPredicted RBP7.85□□□□□ -1.15
CAPN1-225ENST00000533704 TP53RKQ96S44 253 aa7.85□□□□□ -1.15
CAPN1-225ENST00000533704 CHRDL1Q9BU40 450 aa7.85□□□□□ -1.15
CAPN1-225ENST00000533704 FAM212BQ9NTI7 297 aaPredicted RBP7.85□□□□□ -1.15
CAPN1-225ENST00000533704 C3orf85A0A1B0GTC6 90 aa7.84□□□□□ -1.15
CAPN1-225ENST00000533704 A0A1B0GVG6 124 aa7.84□□□□□ -1.15
CAPN1-225ENST00000533704 RBMY1BA6NDE4 496 aaKnown RBP7.84□□□□□ -1.15
CAPN1-225ENST00000533704 RBMY1EA6NEQ0 496 aaKnown RBP7.84□□□□□ -1.15
CAPN1-225ENST00000533704 GABARAPH6UMI1 98 aa7.84□□□□□ -1.15
CAPN1-225ENST00000533704 K7EIM0 57 aa7.84□□□□□ -1.15
CAPN1-225ENST00000533704 NOL3O60936 208 aaKnown RBP7.84□□□□□ -1.15
CAPN1-225ENST00000533704 YIF1AO95070 293 aa7.84□□□□□ -1.15
CAPN1-225ENST00000533704 IGKV1-5P01602 117 aa7.84□□□□□ -1.15
CAPN1-225ENST00000533704 RBMY1DP0C7P1 496 aaKnown RBP7.84□□□□□ -1.15
CAPN1-225ENST00000533704 TBPP20226 339 aa7.84□□□□□ -1.15
CAPN1-225ENST00000533704 RND3P61587 244 aa7.84□□□□□ -1.15
CAPN1-225ENST00000533704 HSPE1P61604 102 aaKnown RBP7.84□□□□□ -1.15
CAPN1-225ENST00000533704 ERHP84090 104 aaKnown RBP7.84□□□□□ -1.15
CAPN1-225ENST00000533704 PRCDQ00LT1 54 aa7.84□□□□□ -1.15
CAPN1-225ENST00000533704 IL18Q14116 193 aa7.84□□□□□ -1.15
CAPN1-225ENST00000533704 SP6Q3SY56 376 aa7.84□□□□□ -1.15
CAPN1-225ENST00000533704 CASC10Q5T4H9 136 aa7.84□□□□□ -1.15
CAPN1-225ENST00000533704 SPSB3Q6PJ21 355 aa7.84□□□□□ -1.15
CAPN1-225ENST00000533704 LHFPL1Q86WI0 220 aa7.84□□□□□ -1.15
CAPN1-225ENST00000533704 CADM3Q8N126 398 aa7.84□□□□□ -1.15
CAPN1-225ENST00000533704 OR2C3Q8N628 320 aa7.84□□□□□ -1.15
CAPN1-225ENST00000533704 SLC35G3Q8N808 338 aa7.84□□□□□ -1.15
CAPN1-225ENST00000533704 OR1P1Q8NH06 330 aa7.84□□□□□ -1.15
CAPN1-225ENST00000533704 TERB2Q8NHR7 220 aa7.84□□□□□ -1.15
CAPN1-225ENST00000533704 ZFAND1Q8TCF1 268 aa7.84□□□□□ -1.15
CAPN1-225ENST00000533704 ZNF486Q96H40 463 aaPredicted RBP7.84□□□□□ -1.15
CAPN1-225ENST00000533704 DIRAS2Q96HU8 199 aa7.84□□□□□ -1.15
CAPN1-225ENST00000533704 ZNF436Q9C0F3 470 aaPredicted RBP7.84□□□□□ -1.15
CAPN1-225ENST00000533704 C6orf62Q9GZU0 229 aaPredicted RBP7.84□□□□□ -1.15
CAPN1-225ENST00000533704 MRPL27Q9P0M9 148 aaKnown RBP7.84□□□□□ -1.15
CAPN1-225ENST00000533704 NDUFA4O00483 81 aa7.83□□□□□ -1.16
CAPN1-225ENST00000533704 NUPL2O15504 423 aaKnown RBP7.83□□□□□ -1.16
CAPN1-225ENST00000533704 ATG12O94817 140 aa7.83□□□□□ -1.16
CAPN1-225ENST00000533704 MT-CO2P00403 227 aa7.83□□□□□ -1.16
CAPN1-225ENST00000533704 IFNA17P01571 189 aa7.83□□□□□ -1.16
CAPN1-225ENST00000533704 ADMP35318 185 aa7.83□□□□□ -1.16
CAPN1-225ENST00000533704 MFAP4P55083 255 aa7.83□□□□□ -1.16
CAPN1-225ENST00000533704 ELLP55199 621 aaPredicted RBP7.83□□□□□ -1.16
CAPN1-225ENST00000533704 ANKRD55Q3KP44 614 aa7.83□□□□□ -1.16
CAPN1-225ENST00000533704 RAB2BQ8WUD1 216 aa7.83□□□□□ -1.16
CAPN1-225ENST00000533704 PDCD10Q9BUL8 212 aa7.83□□□□□ -1.16
CAPN1-225ENST00000533704 DAZ1Q9NQZ3 744 aaKnown RBP7.83□□□□□ -1.16
CAPN1-225ENST00000533704 PAIP2BQ9ULR5 123 aaKnown RBP7.83□□□□□ -1.16
CAPN1-225ENST00000533704 C14orf166Q9Y224 244 aaKnown RBP7.83□□□□□ -1.16
CAPN1-225ENST00000533704 IGHV3-49A0A0A0MS15 119 aa7.82□□□□□ -1.16
CAPN1-225ENST00000533704 TRAV25A0A0B4J276 109 aa7.82□□□□□ -1.16
CAPN1-225ENST00000533704 TEX13DA0A0J9YY54 714 aaPredicted RBP7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms