RNA–Protein interactions for RNA: ENST00000533246.5

BDNF-218, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,000 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-218ENST00000533246 SAXO1Q8IYX7 474 aa10.3□□□□□ -0.76
BDNF-218ENST00000533246 SMIM20Q8N5G0 67 aa10.3□□□□□ -0.76
BDNF-218ENST00000533246 IFITM10A6NMD0 228 aa10.3□□□□□ -0.76
BDNF-218ENST00000533246 RRHO14718 337 aa10.3□□□□□ -0.76
BDNF-218ENST00000533246 CXorf1O96002 111 aa10.3□□□□□ -0.76
BDNF-218ENST00000533246 IL6RP08887 468 aaPredicted RBP10.3□□□□□ -0.76
BDNF-218ENST00000533246 FAM87AP0C7U9 286 aa10.3□□□□□ -0.76
BDNF-218ENST00000533246 COL8A1P27658 744 aa10.3□□□□□ -0.76
BDNF-218ENST00000533246 SRP14P37108 136 aaKnown RBP10.3□□□□□ -0.76
BDNF-218ENST00000533246 PPOXP50336 477 aa10.3□□□□□ -0.76
BDNF-218ENST00000533246 RND2P52198 227 aa10.3□□□□□ -0.76
BDNF-218ENST00000533246 FOXF2Q12947 444 aa10.3□□□□□ -0.76
BDNF-218ENST00000533246 FOXD3Q9UJU5 478 aaPredicted RBP10.3□□□□□ -0.76
BDNF-218ENST00000533246 OTOGLQ3ZCN5 2332 aa10.29□□□□□ -0.76
BDNF-218ENST00000533246 GBF1Q92538 1859 aa10.29□□□□□ -0.76
BDNF-218ENST00000533246 CRYGSP22914 178 aa10.29□□□□□ -0.76
BDNF-218ENST00000533246 GATA2P23769 480 aaPredicted RBP10.29□□□□□ -0.76
BDNF-218ENST00000533246 TCTAP57738 103 aa10.29□□□□□ -0.76
BDNF-218ENST00000533246 RPEL1Q2QD12 228 aa10.29□□□□□ -0.76
BDNF-218ENST00000533246 C10orf113Q5VZT2 155 aa10.29□□□□□ -0.76
BDNF-218ENST00000533246 SMDT1Q9H4I9 107 aa10.29□□□□□ -0.76
BDNF-218ENST00000533246 TRAV24A0A0B4J272 114 aa10.29□□□□□ -0.76
BDNF-218ENST00000533246 CEACAM18A8MTB9 384 aa10.29□□□□□ -0.76
BDNF-218ENST00000533246 CDX4O14627 284 aaPredicted RBP10.29□□□□□ -0.76
BDNF-218ENST00000533246 ESDP10768 282 aa10.29□□□□□ -0.76
BDNF-218ENST00000533246 AZU1P20160 251 aa10.29□□□□□ -0.76
BDNF-218ENST00000533246 HLA-DRB5Q30154 266 aa10.29□□□□□ -0.76
BDNF-218ENST00000533246 OR4D5Q8NGN0 318 aa10.29□□□□□ -0.76
BDNF-218ENST00000533246 ANAPC13Q9BS18 74 aa10.29□□□□□ -0.76
BDNF-218ENST00000533246 ABCA2Q9BZC7 2435 aa10.29□□□□□ -0.76
BDNF-218ENST00000533246 HSPE1P61604 102 aaKnown RBP10.29□□□□□ -0.76
BDNF-218ENST00000533246 HGFACQ04756 655 aa10.29□□□□□ -0.76
BDNF-218ENST00000533246 PRSS3P2Q8NHM4 247 aa10.29□□□□□ -0.76
BDNF-218ENST00000533246 TMEM45BQ96B21 275 aa10.29□□□□□ -0.76
BDNF-218ENST00000533246 THYN1Q9P016 225 aa10.29□□□□□ -0.76
BDNF-218ENST00000533246 RAMP3O60896 148 aa10.28□□□□□ -0.76
BDNF-218ENST00000533246 ARL14EPLP0DKL9 152 aa10.28□□□□□ -0.76
BDNF-218ENST00000533246 PRB4P10163 310 aaPredicted RBP10.28□□□□□ -0.76
BDNF-218ENST00000533246 CCL1P22362 96 aa10.28□□□□□ -0.76
BDNF-218ENST00000533246 CRYBB3P26998 211 aa10.28□□□□□ -0.76
BDNF-218ENST00000533246 RPL8P62917 257 aaKnown RBP10.28□□□□□ -0.76
BDNF-218ENST00000533246 RASL11BQ9BPW5 248 aa10.28□□□□□ -0.76
BDNF-218ENST00000533246 PIMREGQ9BSJ6 248 aa10.28□□□□□ -0.76
BDNF-218ENST00000533246 PNRC2Q9NPJ4 139 aaKnown RBP10.28□□□□□ -0.76
BDNF-218ENST00000533246 S4R3C0 116 aa10.28□□□□□ -0.76
BDNF-218ENST00000533246 YLPM1P49750 1951 aaKnown RBP10.28□□□□□ -0.76
BDNF-218ENST00000533246 LINC00205P59089 165 aa10.28□□□□□ -0.76
BDNF-218ENST00000533246 KRTCAP3Q53RY4 240 aa10.28□□□□□ -0.76
BDNF-218ENST00000533246 ACP7Q6ZNF0 438 aa10.28□□□□□ -0.76
BDNF-218ENST00000533246 FA2HQ7L5A8 372 aa10.28□□□□□ -0.76
BDNF-218ENST00000533246 OR8B3Q8NGG8 313 aa10.28□□□□□ -0.76
BDNF-218ENST00000533246 HS3ST6Q96QI5 342 aa10.28□□□□□ -0.76
BDNF-218ENST00000533246 OR8B2Q96RD0 313 aa10.28□□□□□ -0.76
BDNF-218ENST00000533246 FBLN5Q9UBX5 448 aa10.28□□□□□ -0.76
BDNF-218ENST00000533246 A6NDN8 102 aa10.28□□□□□ -0.76
BDNF-218ENST00000533246 RPL27AP46776 148 aaKnown RBP10.28□□□□□ -0.76
BDNF-218ENST00000533246 TFF3Q07654 80 aa10.28□□□□□ -0.76
BDNF-218ENST00000533246 ECSCRQ19T08 205 aa10.28□□□□□ -0.76
BDNF-218ENST00000533246 MRPL52Q86TS9 123 aaKnown RBP10.28□□□□□ -0.76
BDNF-218ENST00000533246 ABHD17AQ96GS6 310 aa10.28□□□□□ -0.76
BDNF-218ENST00000533246 SPRR3Q9UBC9 169 aa10.28□□□□□ -0.76
BDNF-218ENST00000533246 SLC17A3O00476 420 aa10.27□□□□□ -0.76
BDNF-218ENST00000533246 PPBPP02775 128 aa10.27□□□□□ -0.76
BDNF-218ENST00000533246 CD59P13987 128 aa10.27□□□□□ -0.76
BDNF-218ENST00000533246 NPIPB3Q92617 1050 aa10.27□□□□□ -0.76
BDNF-218ENST00000533246 DENND4CQ5VZ89 1909 aa10.27□□□□□ -0.77
BDNF-218ENST00000533246 NCOA6Q14686 2063 aaPredicted RBP10.27□□□□□ -0.77
BDNF-218ENST00000533246 C10orf91Q5T1B1 145 aa10.27□□□□□ -0.77
BDNF-218ENST00000533246 PQLC2Q6ZP29 291 aa10.27□□□□□ -0.77
BDNF-218ENST00000533246 WDR61Q9GZS3 305 aaKnown RBP10.27□□□□□ -0.77
BDNF-218ENST00000533246 IGHV2OR16-5A0A0B4J2B6 119 aa10.27□□□□□ -0.77
BDNF-218ENST00000533246 DPRXA6NFQ7 191 aa10.27□□□□□ -0.77
BDNF-218ENST00000533246 E9PQ18 207 aa10.27□□□□□ -0.77
BDNF-218ENST00000533246 FABP2P12104 132 aa10.27□□□□□ -0.77
BDNF-218ENST00000533246 OTX1P32242 354 aaPredicted RBP10.27□□□□□ -0.77
BDNF-218ENST00000533246 NAA38Q9BRA0 125 aaKnown RBP10.27□□□□□ -0.77
BDNF-218ENST00000533246 PAXXQ9BUH6 204 aa10.27□□□□□ -0.77
BDNF-218ENST00000533246 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.26□□□□□ -0.77
BDNF-218ENST00000533246 SAP30O75446 220 aa10.26□□□□□ -0.77
BDNF-218ENST00000533246 CCL3L1P16619 93 aa10.26□□□□□ -0.77
BDNF-218ENST00000533246 ANAPC16Q96DE5 110 aa10.26□□□□□ -0.77
BDNF-218ENST00000533246 WFDC1Q9HC57 220 aa10.26□□□□□ -0.77
BDNF-218ENST00000533246 PLSCR4Q9NRQ2 329 aa10.26□□□□□ -0.77
BDNF-218ENST00000533246 A0A087WWC5 75 aa10.26□□□□□ -0.77
BDNF-218ENST00000533246 GLRXP35754 106 aa10.26□□□□□ -0.77
BDNF-218ENST00000533246 HOXA4Q00056 320 aaPredicted RBP10.26□□□□□ -0.77
BDNF-218ENST00000533246 OR51G1Q8NGK1 321 aa10.26□□□□□ -0.77
BDNF-218ENST00000533246 IGHV3OR16-13A0A075B7E8 117 aa10.26□□□□□ -0.77
BDNF-218ENST00000533246 IGHV3-74A0A0B4J1X5 117 aa10.26□□□□□ -0.77
BDNF-218ENST00000533246 PSPNO60542 156 aa10.26□□□□□ -0.77
BDNF-218ENST00000533246 CA1P00915 261 aaPredicted RBP10.26□□□□□ -0.77
BDNF-218ENST00000533246 GUCD1Q96NT3 240 aa10.26□□□□□ -0.77
BDNF-218ENST00000533246 SSBP3Q9BWW4 388 aaPredicted RBP10.26□□□□□ -0.77
BDNF-218ENST00000533246 IGHV3OR16-8A0A075B7F1 116 aa10.25□□□□□ -0.77
BDNF-218ENST00000533246 PGPA6NDG6 321 aa10.25□□□□□ -0.77
BDNF-218ENST00000533246 KBTBD11O94819 623 aa10.25□□□□□ -0.77
BDNF-218ENST00000533246 TMEM256Q8N2U0 113 aa10.25□□□□□ -0.77
BDNF-218ENST00000533246 BMPERQ8N8U9 685 aa10.25□□□□□ -0.77
BDNF-218ENST00000533246 RNASEH2CQ8TDP1 164 aaKnown RBP10.25□□□□□ -0.77
BDNF-218ENST00000533246 LSM10Q969L4 123 aaKnown RBP10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms