RNA–Protein interactions for RNA: ENST00000533115.5

SSSCA1-207, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-207ENST00000533115 A8MWP6 167 aa22.91■■□□□ 1.26
SSSCA1-207ENST00000533115 FAAP20Q6NZ36 180 aa22.91■■□□□ 1.26
SSSCA1-207ENST00000533115 C19orf73Q9NVV2 129 aa22.91■■□□□ 1.26
SSSCA1-207ENST00000533115 TECRQ9NZ01 308 aaKnown RBP22.91■■□□□ 1.26
SSSCA1-207ENST00000533115 CTSDP07339 412 aaPredicted RBP22.9■■□□□ 1.26
SSSCA1-207ENST00000533115 CBLN1P23435 193 aa22.9■■□□□ 1.26
SSSCA1-207ENST00000533115 PLET1Q6UQ28 207 aa22.9■■□□□ 1.26
SSSCA1-207ENST00000533115 STAB2Q8WWQ8 2551 aa22.89■■□□□ 1.25
SSSCA1-207ENST00000533115 TMEM213A2RRL7 107 aa22.89■■□□□ 1.25
SSSCA1-207ENST00000533115 DISC1C4P0D8 188 aa22.89■■□□□ 1.25
SSSCA1-207ENST00000533115 IGKV1-5P01602 117 aa22.89■■□□□ 1.25
SSSCA1-207ENST00000533115 AKAIN1P0CW23 69 aa22.89■■□□□ 1.25
SSSCA1-207ENST00000533115 HSPE1P61604 102 aaKnown RBP22.89■■□□□ 1.25
SSSCA1-207ENST00000533115 PRCDQ00LT1 54 aa22.89■■□□□ 1.25
SSSCA1-207ENST00000533115 CACNG8Q8WXS5 425 aa22.89■■□□□ 1.25
SSSCA1-207ENST00000533115 CEPT1Q9Y6K0 416 aa22.89■■□□□ 1.25
SSSCA1-207ENST00000533115 TGOLN2O43493 480 aa22.88■■□□□ 1.25
SSSCA1-207ENST00000533115 ATG12O94817 140 aa22.88■■□□□ 1.25
SSSCA1-207ENST00000533115 IZUMO4Q1ZYL8 232 aa22.88■■□□□ 1.25
SSSCA1-207ENST00000533115 OR2C3Q8N628 320 aa22.88■■□□□ 1.25
SSSCA1-207ENST00000533115 OR4C16Q8NGL9 310 aa22.88■■□□□ 1.25
SSSCA1-207ENST00000533115 OR1P1Q8NH06 330 aa22.88■■□□□ 1.25
SSSCA1-207ENST00000533115 SCARB1Q8WTV0 552 aa22.88■■□□□ 1.25
SSSCA1-207ENST00000533115 NXF2Q9GZY0 626 aaKnown RBP22.88■■□□□ 1.25
SSSCA1-207ENST00000533115 RSL24D1Q9UHA3 163 aaKnown RBP22.88■■□□□ 1.25
SSSCA1-207ENST00000533115 IGHV3-21A0A0B4J1V1 117 aa22.87■■□□□ 1.25
SSSCA1-207ENST00000533115 OR2T8A6NH00 312 aa22.87■■□□□ 1.25
SSSCA1-207ENST00000533115 ZNF785A8K8V0 405 aa22.87■■□□□ 1.25
SSSCA1-207ENST00000533115 GSTZ1O43708 216 aaPredicted RBP22.87■■□□□ 1.25
SSSCA1-207ENST00000533115 TNFSF8P32971 234 aa22.87■■□□□ 1.25
SSSCA1-207ENST00000533115 AKR1C2P52895 323 aa22.87■■□□□ 1.25
SSSCA1-207ENST00000533115 TRIM16LQ309B1 348 aa22.87■■□□□ 1.25
SSSCA1-207ENST00000533115 SP6Q3SY56 376 aa22.87■■□□□ 1.25
SSSCA1-207ENST00000533115 UNQ9165/PRO28630Q6UXU0 137 aa22.87■■□□□ 1.25
SSSCA1-207ENST00000533115 MCFD2Q8NI22 146 aa22.87■■□□□ 1.25
SSSCA1-207ENST00000533115 ATP6V0BQ99437 205 aa22.87■■□□□ 1.25
SSSCA1-207ENST00000533115 ZNF436Q9C0F3 470 aaPredicted RBP22.87■■□□□ 1.25
SSSCA1-207ENST00000533115 PALMDQ9NP74 551 aa22.87■■□□□ 1.25
SSSCA1-207ENST00000533115 C21orf62Q9NYP8 219 aa22.87■■□□□ 1.25
SSSCA1-207ENST00000533115 IGHV3-35A0A0C4DH35 117 aa22.86■■□□□ 1.25
SSSCA1-207ENST00000533115 K7EIM0 57 aa22.86■■□□□ 1.25
SSSCA1-207ENST00000533115 B3GALNT1O75752 331 aa22.86■■□□□ 1.25
SSSCA1-207ENST00000533115 P0C879 139 aa22.86■■□□□ 1.25
SSSCA1-207ENST00000533115 SURF2Q15527 256 aaPredicted RBP22.86■■□□□ 1.25
SSSCA1-207ENST00000533115 BSCL2Q96G97 398 aaPredicted RBP22.86■■□□□ 1.25
SSSCA1-207ENST00000533115 C14orf166Q9Y224 244 aaKnown RBP22.86■■□□□ 1.25
SSSCA1-207ENST00000533115 UCP1P25874 307 aa22.85■■□□□ 1.25
SSSCA1-207ENST00000533115 TM4SF20Q53R12 229 aa22.85■■□□□ 1.25
SSSCA1-207ENST00000533115 UXS1Q8NBZ7 420 aa22.85■■□□□ 1.25
SSSCA1-207ENST00000533115 RCHY1Q96PM5 261 aa22.85■■□□□ 1.25
SSSCA1-207ENST00000533115 SOSTQ9BQB4 213 aa22.85■■□□□ 1.25
SSSCA1-207ENST00000533115 RTBDNQ9BSG5 229 aaPredicted RBP22.85■■□□□ 1.25
SSSCA1-207ENST00000533115 ZMAT4Q9H898 229 aa22.85■■□□□ 1.25
SSSCA1-207ENST00000533115 A0A0B4J293 547 aa22.84■■□□□ 1.25
SSSCA1-207ENST00000533115 ANKRD20A5PA0PJZ0 165 aa22.84■■□□□ 1.25
SSSCA1-207ENST00000533115 FABP12A6NFH5 140 aa22.84■■□□□ 1.25
SSSCA1-207ENST00000533115 CD81P60033 236 aa22.84■■□□□ 1.25
SSSCA1-207ENST00000533115 SPSB3Q6PJ21 355 aa22.84■■□□□ 1.25
SSSCA1-207ENST00000533115 ZNF114Q8NC26 417 aa22.84■■□□□ 1.25
SSSCA1-207ENST00000533115 PLEKHA3Q9HB20 300 aa22.84■■□□□ 1.25
SSSCA1-207ENST00000533115 UFC1Q9Y3C8 167 aa22.84■■□□□ 1.25
SSSCA1-207ENST00000533115 F8W735 103 aaPredicted RBP22.83■■□□□ 1.25
SSSCA1-207ENST00000533115 ELLP55199 621 aaPredicted RBP22.83■■□□□ 1.25
SSSCA1-207ENST00000533115 GUCA2BQ16661 112 aa22.83■■□□□ 1.25
SSSCA1-207ENST00000533115 ZNF57Q68EA5 555 aaPredicted RBP22.83■■□□□ 1.25
SSSCA1-207ENST00000533115 MARC2Q969Z3 335 aa22.83■■□□□ 1.25
SSSCA1-207ENST00000533115 WDR89Q96FK6 387 aaPredicted RBP22.83■■□□□ 1.25
SSSCA1-207ENST00000533115 PRRT1Q99946 306 aa22.83■■□□□ 1.25
SSSCA1-207ENST00000533115 NEURL2Q9BR09 285 aa22.83■■□□□ 1.25
SSSCA1-207ENST00000533115 TUBA4BQ9H853 241 aa22.83■■□□□ 1.25
SSSCA1-207ENST00000533115 SLC2A8Q9NY64 477 aa22.83■■□□□ 1.25
SSSCA1-207ENST00000533115 MLXQ9UH92 298 aa22.83■■□□□ 1.25
SSSCA1-207ENST00000533115 ERHP84090 104 aaKnown RBP22.82■■□□□ 1.24
SSSCA1-207ENST00000533115 UBAC2Q8NBM4 344 aa22.82■■□□□ 1.24
SSSCA1-207ENST00000533115 OR51S1Q8NGJ8 323 aa22.82■■□□□ 1.24
SSSCA1-207ENST00000533115 MISP3Q96FF7 219 aa22.82■■□□□ 1.24
SSSCA1-207ENST00000533115 TM2D3Q9BRN9 247 aa22.82■■□□□ 1.24
SSSCA1-207ENST00000533115 CHRDL1Q9BU40 450 aa22.82■■□□□ 1.24
SSSCA1-207ENST00000533115 TMEM222Q9H0R3 208 aa22.82■■□□□ 1.24
SSSCA1-207ENST00000533115 C5orf66Q9H5L9 145 aa22.82■■□□□ 1.24
SSSCA1-207ENST00000533115 GPR132Q9UNW8 380 aa22.82■■□□□ 1.24
SSSCA1-207ENST00000533115 SELENOKQ9Y6D0 94 aa22.82■■□□□ 1.24
SSSCA1-207ENST00000533115 TEX13DA0A0J9YY54 714 aaPredicted RBP22.81■■□□□ 1.24
SSSCA1-207ENST00000533115 CCDC160A6NGH7 325 aa22.81■■□□□ 1.24
SSSCA1-207ENST00000533115 C8orf88P0DMB2 117 aa22.81■■□□□ 1.24
SSSCA1-207ENST00000533115 Q56UQ5 140 aa22.81■■□□□ 1.24
SSSCA1-207ENST00000533115 SPINK9Q5DT21 86 aa22.81■■□□□ 1.24
SSSCA1-207ENST00000533115 TMEM190Q8WZ59 177 aa22.81■■□□□ 1.24
SSSCA1-207ENST00000533115 RRNAD1Q96FB5 475 aaKnown RBP22.81■■□□□ 1.24
SSSCA1-207ENST00000533115 NAA60Q9H7X0 242 aa22.81■■□□□ 1.24
SSSCA1-207ENST00000533115 MRPL27Q9P0M9 148 aaKnown RBP22.81■■□□□ 1.24
SSSCA1-207ENST00000533115 ST8SIA3O43173 380 aa22.8■■□□□ 1.24
SSSCA1-207ENST00000533115 CD7P09564 240 aa22.8■■□□□ 1.24
SSSCA1-207ENST00000533115 OR5AC1P0C628 307 aa22.8■■□□□ 1.24
SSSCA1-207ENST00000533115 TMEM61Q8N0U2 210 aa22.8■■□□□ 1.24
SSSCA1-207ENST00000533115 A0A0G2JRQ6 117 aa22.79■■□□□ 1.24
SSSCA1-207ENST00000533115 I3L2K1 104 aa22.79■■□□□ 1.24
SSSCA1-207ENST00000533115 NDUFA4O00483 81 aa22.79■■□□□ 1.24
SSSCA1-207ENST00000533115 CDS2O95674 445 aa22.79■■□□□ 1.24
SSSCA1-207ENST00000533115 IFNA17P01571 189 aa22.79■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms