RNA–Protein interactions for RNA: ENST00000532029.6

LRRK1-208, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best) BASIC

Gene LRRK1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-208ENST00000532029 C8orf86Q6ZUL3 223 aa17.32■□□□□ 0.36
LRRK1-208ENST00000532029 OR52E5Q8NH55 327 aa17.32■□□□□ 0.36
LRRK1-208ENST00000532029 C4orf3Q8WVX3 66 aa17.32■□□□□ 0.36
LRRK1-208ENST00000532029 OR5B12Q96R08 314 aa17.32■□□□□ 0.36
LRRK1-208ENST00000532029 FAM223BA6NKX1 122 aa17.31■□□□□ 0.36
LRRK1-208ENST00000532029 OR2J3O76001 311 aa17.31■□□□□ 0.36
LRRK1-208ENST00000532029 TSPAN15O95858 294 aa17.31■□□□□ 0.36
LRRK1-208ENST00000532029 PTTG1O95997 202 aa17.31■□□□□ 0.36
LRRK1-208ENST00000532029 DCTN2Q13561 401 aaKnown RBP17.31■□□□□ 0.36
LRRK1-208ENST00000532029 FAM223AQ8IWN6 122 aa17.31■□□□□ 0.36
LRRK1-208ENST00000532029 NECAP1Q8NC96 275 aa17.31■□□□□ 0.36
LRRK1-208ENST00000532029 USMG5Q96IX5 58 aa17.31■□□□□ 0.36
LRRK1-208ENST00000532029 GNB4Q9HAV0 340 aa17.31■□□□□ 0.36
LRRK1-208ENST00000532029 GPN1Q9HCN4 374 aaPredicted RBP17.31■□□□□ 0.36
LRRK1-208ENST00000532029 PRAF2O60831 178 aa17.3■□□□□ 0.36
LRRK1-208ENST00000532029 ADAP1O75689 374 aa17.3■□□□□ 0.36
LRRK1-208ENST00000532029 IGHV3-11P01762 117 aa17.3■□□□□ 0.36
LRRK1-208ENST00000532029 SLC25A6P12236 298 aa17.3■□□□□ 0.36
LRRK1-208ENST00000532029 DEFA5Q01523 94 aa17.3■□□□□ 0.36
LRRK1-208ENST00000532029 OR2C3Q8N628 320 aa17.3■□□□□ 0.36
LRRK1-208ENST00000532029 MARVELD1Q9BSK0 173 aa17.3■□□□□ 0.36
LRRK1-208ENST00000532029 FBXL7Q9UJT9 491 aa17.3■□□□□ 0.36
LRRK1-208ENST00000532029 TRBV9A0A0B4J1U6 114 aa17.29■□□□□ 0.36
LRRK1-208ENST00000532029 CEBPZOSA8MTT3 80 aa17.29■□□□□ 0.36
LRRK1-208ENST00000532029 NXPH3O95157 252 aa17.29■□□□□ 0.36
LRRK1-208ENST00000532029 PF4P02776 101 aa17.29■□□□□ 0.36
LRRK1-208ENST00000532029 LGALS1P09382 135 aaKnown RBP17.29■□□□□ 0.36
LRRK1-208ENST00000532029 ATP5G2Q06055 141 aa17.29■□□□□ 0.36
LRRK1-208ENST00000532029 C12orf45Q8N5I9 185 aaPredicted RBP17.29■□□□□ 0.36
LRRK1-208ENST00000532029 UXS1Q8NBZ7 420 aa17.29■□□□□ 0.36
LRRK1-208ENST00000532029 OR1L6Q8NGR2 347 aa17.29■□□□□ 0.36
LRRK1-208ENST00000532029 FANCD2OSQ96PS1 177 aa17.29■□□□□ 0.36
LRRK1-208ENST00000532029 THYN1Q9P016 225 aa17.29■□□□□ 0.36
LRRK1-208ENST00000532029 F11RQ9Y624 299 aaKnown RBP17.29■□□□□ 0.36
LRRK1-208ENST00000532029 IGLV11-55A0A075B6I3 123 aa17.28■□□□□ 0.36
LRRK1-208ENST00000532029 SPNP16150 400 aa17.28■□□□□ 0.36
LRRK1-208ENST00000532029 SNCAP37840 140 aa17.28■□□□□ 0.36
LRRK1-208ENST00000532029 RUNX1Q01196 453 aa17.28■□□□□ 0.36
LRRK1-208ENST00000532029 PDLIM3Q53GG5 364 aaPredicted RBP17.28■□□□□ 0.36
LRRK1-208ENST00000532029 SLC25A24Q6NUK1 477 aa17.28■□□□□ 0.36
LRRK1-208ENST00000532029 FBN3Q75N90 2809 aa17.27■□□□□ 0.36
LRRK1-208ENST00000532029 INS-IGF2F8WCM5 200 aa17.27■□□□□ 0.36
LRRK1-208ENST00000532029 I3L521 148 aa17.27■□□□□ 0.36
LRRK1-208ENST00000532029 MYCNOSP40205 109 aa17.27■□□□□ 0.36
LRRK1-208ENST00000532029 TNFRSF9Q07011 255 aa17.27■□□□□ 0.36
LRRK1-208ENST00000532029 KLK9Q2XQG4 91 aa17.27■□□□□ 0.36
LRRK1-208ENST00000532029 DEFB136Q30KP8 78 aa17.27■□□□□ 0.36
LRRK1-208ENST00000532029 PRR31Q5SQ13 230 aa17.27■□□□□ 0.36
LRRK1-208ENST00000532029 OR1P1Q8NH06 330 aa17.27■□□□□ 0.36
LRRK1-208ENST00000532029 P2RX4Q99571 388 aa17.27■□□□□ 0.36
LRRK1-208ENST00000532029 HSPB7Q9UBY9 170 aa17.27■□□□□ 0.36
LRRK1-208ENST00000532029 KLK9Q9UKQ9 250 aa17.27■□□□□ 0.36
LRRK1-208ENST00000532029 CCL24O00175 119 aa17.26■□□□□ 0.35
LRRK1-208ENST00000532029 PITX3O75364 302 aa17.26■□□□□ 0.35
LRRK1-208ENST00000532029 NDUFB8O95169 186 aa17.26■□□□□ 0.35
LRRK1-208ENST00000532029 EXOSC2Q13868 293 aaKnown RBP17.26■□□□□ 0.35
LRRK1-208ENST00000532029 C15orf32Q32M92 178 aa17.26■□□□□ 0.35
LRRK1-208ENST00000532029 ZNF114Q8NC26 417 aa17.26■□□□□ 0.35
LRRK1-208ENST00000532029 DPF1Q92782 380 aa17.26■□□□□ 0.35
LRRK1-208ENST00000532029 RAX2Q96IS3 184 aa17.26■□□□□ 0.35
LRRK1-208ENST00000532029 HEYLQ9NQ87 328 aaPredicted RBP17.26■□□□□ 0.35
LRRK1-208ENST00000532029 SNRPGP15A8MWD9 76 aa17.25■□□□□ 0.35
LRRK1-208ENST00000532029 SUB1P53999 127 aaKnown RBP eCLIP17.25■□□□□ 0.35
LRRK1-208ENST00000532029 OR11H1Q8NG94 326 aa17.25■□□□□ 0.35
LRRK1-208ENST00000532029 OR1N2Q8NGR9 330 aa17.25■□□□□ 0.35
LRRK1-208ENST00000532029 DUX3Q96PT4 197 aa17.25■□□□□ 0.35
LRRK1-208ENST00000532029 HIPK2Q9H2X6 1198 aa17.25■□□□□ 0.35
LRRK1-208ENST00000532029 FAM90A26D6RGX4 464 aa17.24■□□□□ 0.35
LRRK1-208ENST00000532029 RGS21Q2M5E4 152 aa17.24■□□□□ 0.35
LRRK1-208ENST00000532029 IAH1Q2TAA2 248 aaPredicted RBP17.24■□□□□ 0.35
LRRK1-208ENST00000532029 ZNF343Q6P1L6 599 aa17.24■□□□□ 0.35
LRRK1-208ENST00000532029 DTD1Q8TEA8 209 aa17.24■□□□□ 0.35
LRRK1-208ENST00000532029 EEF1AKMT3Q96AZ1 226 aa17.24■□□□□ 0.35
LRRK1-208ENST00000532029 CXorf58Q96LI9 332 aa17.24■□□□□ 0.35
LRRK1-208ENST00000532029 RBKSQ9H477 322 aa17.24■□□□□ 0.35
LRRK1-208ENST00000532029 DMRT1Q9Y5R6 373 aa17.24■□□□□ 0.35
LRRK1-208ENST00000532029 ANKRD34BA5PLL1 514 aa17.23■□□□□ 0.35
LRRK1-208ENST00000532029 MPTX1A8MV57 137 aa17.23■□□□□ 0.35
LRRK1-208ENST00000532029 FAM25EA8MYX2 175 aa17.23■□□□□ 0.35
LRRK1-208ENST00000532029 MED6O75586 246 aa17.23■□□□□ 0.35
LRRK1-208ENST00000532029 HTR2BP41595 481 aa17.23■□□□□ 0.35
LRRK1-208ENST00000532029 MFAP2P55001 183 aa17.23■□□□□ 0.35
LRRK1-208ENST00000532029 ZNF616Q08AN1 781 aa17.23■□□□□ 0.35
LRRK1-208ENST00000532029 FAM209BQ5JX69 171 aa17.23■□□□□ 0.35
LRRK1-208ENST00000532029 TREML4Q6UXN2 200 aa17.23■□□□□ 0.35
LRRK1-208ENST00000532029 ETV3LQ6ZN32 361 aa17.23■□□□□ 0.35
LRRK1-208ENST00000532029 MISP3Q96FF7 219 aa17.23■□□□□ 0.35
LRRK1-208ENST00000532029 CCSO14618 274 aa17.22■□□□□ 0.35
LRRK1-208ENST00000532029 HSPB1P04792 205 aaKnown RBP17.22■□□□□ 0.35
LRRK1-208ENST00000532029 RANGRFQ9HD47 186 aaPredicted RBP17.22■□□□□ 0.35
LRRK1-208ENST00000532029 C5orf51A6NDU8 294 aa17.21■□□□□ 0.35
LRRK1-208ENST00000532029 LINC01619G3V211 115 aa17.21■□□□□ 0.35
LRRK1-208ENST00000532029 OR8U8P0C7N1 319 aa17.21■□□□□ 0.35
LRRK1-208ENST00000532029 RNASE2P10153 161 aaKnown RBP17.21■□□□□ 0.35
LRRK1-208ENST00000532029 ZBTB8BQ8NAP8 495 aaPredicted RBP17.21■□□□□ 0.35
LRRK1-208ENST00000532029 SLC24A4Q8NFF2 622 aa17.21■□□□□ 0.35
LRRK1-208ENST00000532029 VN1R17PQ8TDU5 208 aa17.21■□□□□ 0.35
LRRK1-208ENST00000532029 OR10C1Q96KK4 312 aa17.21■□□□□ 0.35
LRRK1-208ENST00000532029 GSKIPQ9P0R6 139 aa17.21■□□□□ 0.35
LRRK1-208ENST00000532029 PEF1Q9UBV8 284 aaKnown RBP17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms