RNA–Protein interactions for RNA: ENST00000531480.2

CPSF1-206, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3

Gene CPSF1, Length 789 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-206ENST00000531480 LY86O95711 162 aa11.24□□□□□ -0.61
CPSF1-206ENST00000531480 PF4V1P10720 104 aa11.24□□□□□ -0.61
CPSF1-206ENST00000531480 SLC25A6P12236 298 aa11.24□□□□□ -0.61
CPSF1-206ENST00000531480 AREGP15514 252 aa11.24□□□□□ -0.61
CPSF1-206ENST00000531480 PSMB6P28072 239 aa11.24□□□□□ -0.61
CPSF1-206ENST00000531480 NUP62P37198 522 aaPredicted RBP11.24□□□□□ -0.61
CPSF1-206ENST00000531480 HSPE1P61604 102 aaKnown RBP11.24□□□□□ -0.61
CPSF1-206ENST00000531480 WT1-ASQ06250 92 aa11.24□□□□□ -0.61
CPSF1-206ENST00000531480 IZUMO4Q1ZYL8 232 aa11.24□□□□□ -0.61
CPSF1-206ENST00000531480 ANKRD55Q3KP44 614 aa11.24□□□□□ -0.61
CPSF1-206ENST00000531480 ZFP69Q49AA0 526 aa11.24□□□□□ -0.61
CPSF1-206ENST00000531480 SLC35G3Q8N808 338 aa11.24□□□□□ -0.61
CPSF1-206ENST00000531480 OR5T1Q8NG75 326 aa11.24□□□□□ -0.61
CPSF1-206ENST00000531480 OR4A16Q8NH70 328 aa11.24□□□□□ -0.61
CPSF1-206ENST00000531480 C2orf50Q96LR7 162 aa11.24□□□□□ -0.61
CPSF1-206ENST00000531480 HYLS1Q96M11 299 aa11.24□□□□□ -0.61
CPSF1-206ENST00000531480 NEURL2Q9BR09 285 aa11.24□□□□□ -0.61
CPSF1-206ENST00000531480 NMES1Q9C002 83 aa11.24□□□□□ -0.61
CPSF1-206ENST00000531480 C13orf42A0A1B0GVH6 325 aa11.23□□□□□ -0.61
CPSF1-206ENST00000531480 I3L521 148 aa11.23□□□□□ -0.61
CPSF1-206ENST00000531480 TSPAN15O95858 294 aa11.23□□□□□ -0.61
CPSF1-206ENST00000531480 PRCDQ00LT1 54 aa11.23□□□□□ -0.61
CPSF1-206ENST00000531480 NSUN5P1Q3KNT7 163 aa11.23□□□□□ -0.61
CPSF1-206ENST00000531480 TMEM65Q6PI78 240 aa11.23□□□□□ -0.61
CPSF1-206ENST00000531480 C18orf65Q6ZTR6 163 aa11.23□□□□□ -0.61
CPSF1-206ENST00000531480 OR52E5Q8NH55 327 aa11.23□□□□□ -0.61
CPSF1-206ENST00000531480 C4orf3Q8WVX3 66 aa11.23□□□□□ -0.61
CPSF1-206ENST00000531480 GPR146Q96CH1 333 aa11.23□□□□□ -0.61
CPSF1-206ENST00000531480 FYTTD1Q96QD9 318 aaKnown RBP11.23□□□□□ -0.61
CPSF1-206ENST00000531480 PRR13Q9NZ81 148 aa11.23□□□□□ -0.61
CPSF1-206ENST00000531480 RBMXL2O75526 392 aaKnown RBP11.22□□□□□ -0.61
CPSF1-206ENST00000531480 APELAP0DMC3 54 aa11.22□□□□□ -0.61
CPSF1-206ENST00000531480 PVALBP20472 110 aaPredicted RBP11.22□□□□□ -0.61
CPSF1-206ENST00000531480 ETV3LQ6ZN32 361 aa11.22□□□□□ -0.61
CPSF1-206ENST00000531480 LYZL2Q7Z4W2 148 aa11.22□□□□□ -0.61
CPSF1-206ENST00000531480 OR4F17Q8NGA8 305 aa11.22□□□□□ -0.61
CPSF1-206ENST00000531480 OR10W1Q8NGF6 305 aa11.22□□□□□ -0.61
CPSF1-206ENST00000531480 THAP6Q8TBB0 222 aa11.22□□□□□ -0.61
CPSF1-206ENST00000531480 FANCD2OSQ96PS1 177 aa11.22□□□□□ -0.61
CPSF1-206ENST00000531480 OR4F4Q96R69 305 aa11.22□□□□□ -0.61
CPSF1-206ENST00000531480 MGAM2Q2M2H8 2515 aa11.22□□□□□ -0.61
CPSF1-206ENST00000531480 CMYA5Q8N3K9 4069 aa11.21□□□□□ -0.61
CPSF1-206ENST00000531480 A0A1B0GU03 582 aa11.21□□□□□ -0.61
CPSF1-206ENST00000531480 FAM223BA6NKX1 122 aa11.21□□□□□ -0.61
CPSF1-206ENST00000531480 ST8SIA3O43173 380 aa11.21□□□□□ -0.61
CPSF1-206ENST00000531480 C1QBP02746 253 aa11.21□□□□□ -0.61
CPSF1-206ENST00000531480 HOXB5P09067 269 aa11.21□□□□□ -0.61
CPSF1-206ENST00000531480 FHL3Q13643 280 aa11.21□□□□□ -0.61
CPSF1-206ENST00000531480 IAH1Q2TAA2 248 aaPredicted RBP11.21□□□□□ -0.61
CPSF1-206ENST00000531480 FAM223AQ8IWN6 122 aa11.21□□□□□ -0.61
CPSF1-206ENST00000531480 ZNF114Q8NC26 417 aa11.21□□□□□ -0.61
CPSF1-206ENST00000531480 KLHL30-AS1Q8NEE0 82 aa11.21□□□□□ -0.61
CPSF1-206ENST00000531480 OR11H7Q8NGC8 314 aa11.21□□□□□ -0.61
CPSF1-206ENST00000531480 OR2T35Q8NGX2 323 aa11.21□□□□□ -0.61
CPSF1-206ENST00000531480 USMG5Q96IX5 58 aa11.21□□□□□ -0.61
CPSF1-206ENST00000531480 P2RX4Q99571 388 aa11.21□□□□□ -0.61
CPSF1-206ENST00000531480 GNB4Q9HAV0 340 aa11.21□□□□□ -0.61
CPSF1-206ENST00000531480 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.21□□□□□ -0.61
CPSF1-206ENST00000531480 DMRT1Q9Y5R6 373 aa11.21□□□□□ -0.61
CPSF1-206ENST00000531480 IGLV11-55A0A075B6I3 123 aa11.2□□□□□ -0.62
CPSF1-206ENST00000531480 A0A0G2JLM5 398 aa11.2□□□□□ -0.62
CPSF1-206ENST00000531480 A0A1W2PRX2 142 aa11.2□□□□□ -0.62
CPSF1-206ENST00000531480 PITX3O75364 302 aa11.2□□□□□ -0.62
CPSF1-206ENST00000531480 MED6O75586 246 aa11.2□□□□□ -0.62
CPSF1-206ENST00000531480 TRGV3P03979 118 aa11.2□□□□□ -0.62
CPSF1-206ENST00000531480 LGALS1P09382 135 aaKnown RBP11.2□□□□□ -0.62
CPSF1-206ENST00000531480 TPPP2P59282 170 aa11.2□□□□□ -0.62
CPSF1-206ENST00000531480 KHDC1LQ5JSQ8 128 aa11.2□□□□□ -0.62
CPSF1-206ENST00000531480 GGNBP1Q5YKI7 109 aa11.2□□□□□ -0.62
CPSF1-206ENST00000531480 PVRIGQ6DKI7 326 aa11.2□□□□□ -0.62
CPSF1-206ENST00000531480 C8orf86Q6ZUL3 223 aa11.2□□□□□ -0.62
CPSF1-206ENST00000531480 OR2C3Q8N628 320 aa11.2□□□□□ -0.62
CPSF1-206ENST00000531480 NECAP1Q8NC96 275 aa11.2□□□□□ -0.62
CPSF1-206ENST00000531480 MS4A10Q96PG2 267 aa11.2□□□□□ -0.62
CPSF1-206ENST00000531480 RANGRFQ9HD47 186 aaPredicted RBP11.2□□□□□ -0.62
CPSF1-206ENST00000531480 GSKIPQ9P0R6 139 aa11.2□□□□□ -0.62
CPSF1-206ENST00000531480 CACNG5Q9UF02 275 aa11.2□□□□□ -0.62
CPSF1-206ENST00000531480 WRBO00258 174 aa11.19□□□□□ -0.62
CPSF1-206ENST00000531480 WIPF1O43516 503 aa11.19□□□□□ -0.62
CPSF1-206ENST00000531480 OR13C7P0DN81 318 aa11.19□□□□□ -0.62
CPSF1-206ENST00000531480 HIST1H1BP16401 226 aaKnown RBP11.19□□□□□ -0.62
CPSF1-206ENST00000531480 MYCNOSP40205 109 aa11.19□□□□□ -0.62
CPSF1-206ENST00000531480 SPCS3P61009 180 aa11.19□□□□□ -0.62
CPSF1-206ENST00000531480 ZNF343Q6P1L6 599 aa11.19□□□□□ -0.62
CPSF1-206ENST00000531480 C19orf35Q6ZS72 473 aa11.19□□□□□ -0.62
CPSF1-206ENST00000531480 INO80EQ8NBZ0 244 aaPredicted RBP11.19□□□□□ -0.62
CPSF1-206ENST00000531480 WFDC9Q8NEX5 89 aa11.19□□□□□ -0.62
CPSF1-206ENST00000531480 RAX2Q96IS3 184 aa11.19□□□□□ -0.62
CPSF1-206ENST00000531480 ST6GAL2Q96JF0 529 aa11.19□□□□□ -0.62
CPSF1-206ENST00000531480 F11RQ9Y624 299 aaKnown RBP11.19□□□□□ -0.62
CPSF1-206ENST00000531480 FAM90A26D6RGX4 464 aa11.18□□□□□ -0.62
CPSF1-206ENST00000531480 SCAF4O95104 1147 aaKnown RBP11.18□□□□□ -0.62
CPSF1-206ENST00000531480 PRH1P02810 166 aa11.18□□□□□ -0.62
CPSF1-206ENST00000531480 REG1AP05451 166 aa11.18□□□□□ -0.62
CPSF1-206ENST00000531480 CXCL3P19876 107 aa11.18□□□□□ -0.62
CPSF1-206ENST00000531480 EIF2B2P49770 351 aaKnown RBP11.18□□□□□ -0.62
CPSF1-206ENST00000531480 MFAP2P55001 183 aa11.18□□□□□ -0.62
CPSF1-206ENST00000531480 RHOGP84095 191 aa11.18□□□□□ -0.62
CPSF1-206ENST00000531480 BSXQ3C1V8 233 aa11.18□□□□□ -0.62
CPSF1-206ENST00000531480 TREML4Q6UXN2 200 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms