RNA–Protein interactions for RNA: ENST00000530516.1

NUP98-218, Transcript of nucleoporin 98, humanhuman

TSL 2

Gene NUP98, Length 391 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-218ENST00000530516 FADS1O60427 444 aa0.16□□□□□ -2.38
NUP98-218ENST00000530516 NDUFS6O75380 124 aaKnown RBP0.16□□□□□ -2.38
NUP98-218ENST00000530516 PRM2P04554 102 aa0.16□□□□□ -2.38
NUP98-218ENST00000530516 UCHL3P15374 230 aa0.16□□□□□ -2.38
NUP98-218ENST00000530516 RPS4Y1P22090 263 aaKnown RBP0.16□□□□□ -2.38
NUP98-218ENST00000530516 PSMB6P28072 239 aa0.16□□□□□ -2.38
NUP98-218ENST00000530516 PPP1R1AQ13522 171 aa0.16□□□□□ -2.38
NUP98-218ENST00000530516 LCN15Q6UWW0 184 aa0.16□□□□□ -2.38
NUP98-218ENST00000530516 SBSPONQ8IVN8 264 aa0.16□□□□□ -2.38
NUP98-218ENST00000530516 C10orf67Q8IYJ2 551 aa0.16□□□□□ -2.38
NUP98-218ENST00000530516 Q8N814 137 aa0.16□□□□□ -2.38
NUP98-218ENST00000530516 MCFD2Q8NI22 146 aa0.16□□□□□ -2.38
NUP98-218ENST00000530516 ZNF418Q8TF45 676 aaPredicted RBP0.16□□□□□ -2.38
NUP98-218ENST00000530516 RASSF5Q8WWW0 418 aa0.16□□□□□ -2.38
NUP98-218ENST00000530516 TMEM106AQ96A25 262 aa0.16□□□□□ -2.38
NUP98-218ENST00000530516 FAM96AQ9H5X1 160 aa0.16□□□□□ -2.38
NUP98-218ENST00000530516 ZFP30Q9Y2G7 519 aa0.16□□□□□ -2.38
NUP98-218ENST00000530516 MAST4O15021 2626 aa0.15□□□□□ -2.39
NUP98-218ENST00000530516 A0A1B0GV50 99 aa0.15□□□□□ -2.39
NUP98-218ENST00000530516 CLDN25C9JDP6 229 aa0.15□□□□□ -2.39
NUP98-218ENST00000530516 F5H768 121 aa0.15□□□□□ -2.39
NUP98-218ENST00000530516 OR2T1O43869 369 aa0.15□□□□□ -2.39
NUP98-218ENST00000530516 OR1I1O60431 355 aa0.15□□□□□ -2.39
NUP98-218ENST00000530516 HTR1AP08908 422 aa0.15□□□□□ -2.39
NUP98-218ENST00000530516 ASAH2BP0C7U1 165 aa0.15□□□□□ -2.39
NUP98-218ENST00000530516 FAM228BP0C875 321 aa0.15□□□□□ -2.39
NUP98-218ENST00000530516 C8orf88P0DMB2 117 aa0.15□□□□□ -2.39
NUP98-218ENST00000530516 RAB4BP61018 213 aa0.15□□□□□ -2.39
NUP98-218ENST00000530516 CCL20P78556 96 aa0.15□□□□□ -2.39
NUP98-218ENST00000530516 IFITM2Q01629 132 aa0.15□□□□□ -2.39
NUP98-218ENST00000530516 SRSF6Q13247 344 aaKnown RBP0.15□□□□□ -2.39
NUP98-218ENST00000530516 PDE6HQ13956 83 aa0.15□□□□□ -2.39
NUP98-218ENST00000530516 GDF5OSQ5U4N7 250 aa0.15□□□□□ -2.39
NUP98-218ENST00000530516 PLEKHG7Q6ZR37 379 aa0.15□□□□□ -2.39
NUP98-218ENST00000530516 DEFB125Q8N687 156 aa0.15□□□□□ -2.39
NUP98-218ENST00000530516 OR5B17Q8NGF7 314 aa0.15□□□□□ -2.39
NUP98-218ENST00000530516 DIRAS2Q96HU8 199 aa0.15□□□□□ -2.39
NUP98-218ENST00000530516 SCGB3A1Q96QR1 104 aa0.15□□□□□ -2.39
NUP98-218ENST00000530516 AMELYQ99218 206 aa0.15□□□□□ -2.39
NUP98-218ENST00000530516 C7orf50Q9BRJ6 194 aaKnown RBP0.15□□□□□ -2.39
NUP98-218ENST00000530516 SLC50A1Q9BRV3 221 aa0.15□□□□□ -2.39
NUP98-218ENST00000530516 HDHD2Q9H0R4 259 aa0.15□□□□□ -2.39
NUP98-218ENST00000530516 EFCAB1Q9HAE3 211 aa0.15□□□□□ -2.39
NUP98-218ENST00000530516 C15orf41Q9Y2V0 281 aa0.15□□□□□ -2.39
NUP98-218ENST00000530516 ABCC11Q96J66 1382 aa0.15□□□□□ -2.39
NUP98-218ENST00000530516 MYO18AQ92614 2054 aaKnown RBP0.15□□□□□ -2.39
NUP98-218ENST00000530516 A0A1W2PPM0 123 aa0.14□□□□□ -2.39
NUP98-218ENST00000530516 FABP12A6NFH5 140 aa0.14□□□□□ -2.39
NUP98-218ENST00000530516 C2orf70A6NJV1 201 aa0.14□□□□□ -2.39
NUP98-218ENST00000530516 PFDN6O15212 129 aa0.14□□□□□ -2.39
NUP98-218ENST00000530516 APOEP02649 317 aa0.14□□□□□ -2.39
NUP98-218ENST00000530516 REG1AP05451 166 aa0.14□□□□□ -2.39
NUP98-218ENST00000530516 COX6A1P12074 109 aa0.14□□□□□ -2.39
NUP98-218ENST00000530516 FKBP2P26885 142 aaKnown RBP0.14□□□□□ -2.39
NUP98-218ENST00000530516 ZNF93P35789 620 aaPredicted RBP0.14□□□□□ -2.39
NUP98-218ENST00000530516 MAP2K4P45985 399 aa0.14□□□□□ -2.39
NUP98-218ENST00000530516 MARCKSL1P49006 195 aa0.14□□□□□ -2.39
NUP98-218ENST00000530516 MAP3K7CLP57077 242 aa0.14□□□□□ -2.39
NUP98-218ENST00000530516 MED21Q13503 144 aa0.14□□□□□ -2.39
NUP98-218ENST00000530516 RSU1Q15404 277 aa0.14□□□□□ -2.39
NUP98-218ENST00000530516 COQ5Q5HYK3 327 aa0.14□□□□□ -2.39
NUP98-218ENST00000530516 SPANXN3Q5MJ09 141 aa0.14□□□□□ -2.39
NUP98-218ENST00000530516 COMMD7Q86VX2 200 aa0.14□□□□□ -2.39
NUP98-218ENST00000530516 LINC00311Q8N616 119 aa0.14□□□□□ -2.39
NUP98-218ENST00000530516 Q8N6K4 173 aa0.14□□□□□ -2.39
NUP98-218ENST00000530516 CNBD2Q96M20 576 aa0.14□□□□□ -2.39
NUP98-218ENST00000530516 MIXL1Q9H2W2 232 aa0.14□□□□□ -2.39
NUP98-218ENST00000530516 PLEKHJ1Q9NW61 149 aa0.14□□□□□ -2.39
NUP98-218ENST00000530516 C3orf18Q9UK00 162 aa0.14□□□□□ -2.39
NUP98-218ENST00000530516 ASCC3Q8N3C0 2202 aaKnown RBP0.14□□□□□ -2.39
NUP98-218ENST00000530516 SIP14410 1827 aa0.13□□□□□ -2.39
NUP98-218ENST00000530516 HEATR1Q9H583 2144 aaKnown RBP0.13□□□□□ -2.39
NUP98-218ENST00000530516 APCP25054 2843 aa0.13□□□□□ -2.39
NUP98-218ENST00000530516 TRBV20OR9-2A0A075B6H5 130 aa0.13□□□□□ -2.39
NUP98-218ENST00000530516 A0A0D9SG52 128 aa0.13□□□□□ -2.39
NUP98-218ENST00000530516 A0A0J9YY10 115 aa0.13□□□□□ -2.39
NUP98-218ENST00000530516 A0A1B0GX78 115 aa0.13□□□□□ -2.39
NUP98-218ENST00000530516 GOLGA8KD6RF30 607 aa0.13□□□□□ -2.39
NUP98-218ENST00000530516 KCNK1O00180 336 aa0.13□□□□□ -2.39
NUP98-218ENST00000530516 INE1O15225 51 aa0.13□□□□□ -2.39
NUP98-218ENST00000530516 CALUO43852 315 aaPredicted RBP0.13□□□□□ -2.39
NUP98-218ENST00000530516 TYMSP04818 313 aa0.13□□□□□ -2.39
NUP98-218ENST00000530516 CTSDP07339 412 aaPredicted RBP0.13□□□□□ -2.39
NUP98-218ENST00000530516 BAALC-AS2P0C853 105 aa0.13□□□□□ -2.39
NUP98-218ENST00000530516 MIFP14174 115 aa0.13□□□□□ -2.39
NUP98-218ENST00000530516 HIST1H2BOP23527 126 aa0.13□□□□□ -2.39
NUP98-218ENST00000530516 RPL12P30050 165 aaKnown RBP0.13□□□□□ -2.39
NUP98-218ENST00000530516 HIST1H2BBP33778 126 aa0.13□□□□□ -2.39
NUP98-218ENST00000530516 HIST1H2BDP58876 126 aa0.13□□□□□ -2.39
NUP98-218ENST00000530516 HIST1H2BCP62807 126 aa0.13□□□□□ -2.39
NUP98-218ENST00000530516 RHOGP84095 191 aa0.13□□□□□ -2.39
NUP98-218ENST00000530516 GRK1Q15835 563 aa0.13□□□□□ -2.39
NUP98-218ENST00000530516 KCNJ8Q15842 424 aa0.13□□□□□ -2.39
NUP98-218ENST00000530516 HIST2H2BEQ16778 126 aa0.13□□□□□ -2.39
NUP98-218ENST00000530516 HIST2H2BFQ5QNW6 126 aaPredicted RBP0.13□□□□□ -2.39
NUP98-218ENST00000530516 AADACL3Q5VUY0 350 aa0.13□□□□□ -2.39
NUP98-218ENST00000530516 RPL22L1Q6P5R6 122 aaKnown RBP0.13□□□□□ -2.39
NUP98-218ENST00000530516 Q6ZS49 121 aa0.13□□□□□ -2.39
NUP98-218ENST00000530516 OOSP2Q86WS3 158 aa0.13□□□□□ -2.39
NUP98-218ENST00000530516 IQCF2Q8IXL9 164 aa0.13□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms