RNA–Protein interactions for RNA: ENST00000530277.5

SCN3B-206, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 3,984 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-206ENST00000530277 MORN2Q502X0 79 aa10.28□□□□□ -0.76
SCN3B-206ENST00000530277 SPSB3Q6PJ21 355 aa10.28□□□□□ -0.76
SCN3B-206ENST00000530277 FOXL2NBQ6ZUU3 175 aa10.28□□□□□ -0.76
SCN3B-206ENST00000530277 DMRTC2Q8IXT2 367 aaPredicted RBP10.28□□□□□ -0.76
SCN3B-206ENST00000530277 OR9G1Q8NH87 305 aa10.28□□□□□ -0.76
SCN3B-206ENST00000530277 ADTRPQ96IZ2 230 aa10.28□□□□□ -0.76
SCN3B-206ENST00000530277 NRN1LQ496H8 165 aa10.28□□□□□ -0.76
SCN3B-206ENST00000530277 MDS2Q8NDY4 140 aa10.28□□□□□ -0.76
SCN3B-206ENST00000530277 TMUB1Q9BVT8 246 aa10.28□□□□□ -0.76
SCN3B-206ENST00000530277 MRPL20Q9BYC9 149 aaKnown RBP10.28□□□□□ -0.76
SCN3B-206ENST00000530277 SMDT1Q9H4I9 107 aa10.28□□□□□ -0.76
SCN3B-206ENST00000530277 SELENOKQ9Y6D0 94 aa10.28□□□□□ -0.76
SCN3B-206ENST00000530277 PGPA6NDG6 321 aa10.28□□□□□ -0.76
SCN3B-206ENST00000530277 FOXA3P55318 350 aaPredicted RBP10.28□□□□□ -0.76
SCN3B-206ENST00000530277 ANAPC16Q96DE5 110 aa10.28□□□□□ -0.76
SCN3B-206ENST00000530277 IDI2-AS1Q9NZ38 188 aa10.28□□□□□ -0.76
SCN3B-206ENST00000530277 A0A1B0GUS0 222 aa10.27□□□□□ -0.76
SCN3B-206ENST00000530277 A0A1W2PN81 502 aa10.27□□□□□ -0.76
SCN3B-206ENST00000530277 WT1P19544 449 aaPredicted RBP10.27□□□□□ -0.76
SCN3B-206ENST00000530277 HLA-DRB5Q30154 266 aa10.27□□□□□ -0.76
SCN3B-206ENST00000530277 FAM90A1Q86YD7 464 aa10.27□□□□□ -0.76
SCN3B-206ENST00000530277 LOXL4Q96JB6 756 aa10.27□□□□□ -0.76
SCN3B-206ENST00000530277 PAXXQ9BUH6 204 aa10.27□□□□□ -0.76
SCN3B-206ENST00000530277 RNASE7Q9H1E1 156 aaKnown RBP10.27□□□□□ -0.76
SCN3B-206ENST00000530277 JPT1Q9UK76 154 aa10.27□□□□□ -0.76
SCN3B-206ENST00000530277 IGHV3OR16-10A0A075B7F0 116 aa10.27□□□□□ -0.77
SCN3B-206ENST00000530277 A0A1W2PNU3 283 aaPredicted RBP10.27□□□□□ -0.77
SCN3B-206ENST00000530277 DKK1O94907 266 aa10.27□□□□□ -0.77
SCN3B-206ENST00000530277 IGHV3-23P01764 117 aa10.27□□□□□ -0.77
SCN3B-206ENST00000530277 ZNF883P0CG24 379 aa10.27□□□□□ -0.77
SCN3B-206ENST00000530277 GCHFRP30047 84 aa10.27□□□□□ -0.77
SCN3B-206ENST00000530277 DUTP33316 252 aaKnown RBP10.27□□□□□ -0.77
SCN3B-206ENST00000530277 PAX9P55771 341 aa10.27□□□□□ -0.77
SCN3B-206ENST00000530277 HEPN1Q6WQI6 88 aa10.27□□□□□ -0.77
SCN3B-206ENST00000530277 GCSAMQ8N6F7 178 aa10.27□□□□□ -0.77
SCN3B-206ENST00000530277 STARD4Q96DR4 205 aa10.27□□□□□ -0.77
SCN3B-206ENST00000530277 USP9XQ93008 2570 aaPredicted RBP10.27□□□□□ -0.77
SCN3B-206ENST00000530277 CGB1A6NKQ9 187 aa10.27□□□□□ -0.77
SCN3B-206ENST00000530277 CENPWQ5EE01 88 aa10.27□□□□□ -0.77
SCN3B-206ENST00000530277 DMRTA1Q5VZB9 504 aa10.27□□□□□ -0.77
SCN3B-206ENST00000530277 UNQ6494/PRO21346Q6UXR6 183 aa10.27□□□□□ -0.77
SCN3B-206ENST00000530277 COLCA1Q6ZS62 124 aa10.27□□□□□ -0.77
SCN3B-206ENST00000530277 PSMG3Q9BT73 122 aaPredicted RBP10.27□□□□□ -0.77
SCN3B-206ENST00000530277 IL19Q9UHD0 177 aa10.27□□□□□ -0.77
SCN3B-206ENST00000530277 MRPS18CQ9Y3D5 142 aaKnown RBP10.27□□□□□ -0.77
SCN3B-206ENST00000530277 TANC2Q9HCD6 1990 aa10.27□□□□□ -0.77
SCN3B-206ENST00000530277 FAM90A26D6RGX4 464 aa10.26□□□□□ -0.77
SCN3B-206ENST00000530277 SOD3P08294 240 aa10.26□□□□□ -0.77
SCN3B-206ENST00000530277 COL8A1P27658 744 aa10.26□□□□□ -0.77
SCN3B-206ENST00000530277 NOL4LQ96MY1 436 aaPredicted RBP10.26□□□□□ -0.77
SCN3B-206ENST00000530277 TMEM167BQ9NRX6 74 aa10.26□□□□□ -0.77
SCN3B-206ENST00000530277 IGHV3-49A0A0A0MS15 119 aa10.26□□□□□ -0.77
SCN3B-206ENST00000530277 PRNTQ86SH4 94 aa10.26□□□□□ -0.77
SCN3B-206ENST00000530277 LURAP1LQ8IV03 231 aa10.26□□□□□ -0.77
SCN3B-206ENST00000530277 C14orf144Q96I85 54 aa10.26□□□□□ -0.77
SCN3B-206ENST00000530277 SEPSECSQ9HD40 501 aaKnown RBP10.26□□□□□ -0.77
SCN3B-206ENST00000530277 ELOA3CA0A087WX78 387 aaPredicted RBP10.26□□□□□ -0.77
SCN3B-206ENST00000530277 TRAV5A0A0B4J249 113 aa10.26□□□□□ -0.77
SCN3B-206ENST00000530277 PYYP10082 97 aa10.26□□□□□ -0.77
SCN3B-206ENST00000530277 KIR2DS2P43631 304 aa10.26□□□□□ -0.77
SCN3B-206ENST00000530277 TIMM23BQ5SRD1 257 aa10.26□□□□□ -0.77
SCN3B-206ENST00000530277 IBA57Q5T440 356 aaKnown RBP10.26□□□□□ -0.77
SCN3B-206ENST00000530277 Q6ZR03 302 aa10.26□□□□□ -0.77
SCN3B-206ENST00000530277 CYP2G1PQ6ZSU1 146 aa10.26□□□□□ -0.77
SCN3B-206ENST00000530277 MRPL18Q9H0U6 180 aaKnown RBP10.26□□□□□ -0.77
SCN3B-206ENST00000530277 GOLT1BQ9Y3E0 138 aa10.26□□□□□ -0.77
SCN3B-206ENST00000530277 MGAQ8IWI9 3026 aa10.26□□□□□ -0.77
SCN3B-206ENST00000530277 ZNF146Q15072 292 aa10.25□□□□□ -0.77
SCN3B-206ENST00000530277 SFRP2Q96HF1 295 aa10.25□□□□□ -0.77
SCN3B-206ENST00000530277 SEBOXQ9HB31 216 aaPredicted RBP10.25□□□□□ -0.77
SCN3B-206ENST00000530277 SORL1Q92673 2214 aa10.25□□□□□ -0.77
SCN3B-206ENST00000530277 M0R143 59 aa10.25□□□□□ -0.77
SCN3B-206ENST00000530277 GNG7O60262 68 aa10.25□□□□□ -0.77
SCN3B-206ENST00000530277 SS18L1O75177 396 aaPredicted RBP10.25□□□□□ -0.77
SCN3B-206ENST00000530277 RPL27AP46776 148 aaKnown RBP10.25□□□□□ -0.77
SCN3B-206ENST00000530277 ECSCRQ19T08 205 aa10.25□□□□□ -0.77
SCN3B-206ENST00000530277 REC114Q7Z4M0 266 aa10.25□□□□□ -0.77
SCN3B-206ENST00000530277 MUC15Q8N387 334 aa10.25□□□□□ -0.77
SCN3B-206ENST00000530277 FAM19A2Q8N3H0 131 aa10.25□□□□□ -0.77
SCN3B-206ENST00000530277 FBXL15Q9H469 300 aa10.25□□□□□ -0.77
SCN3B-206ENST00000530277 WASHC3Q9Y3C0 194 aa10.25□□□□□ -0.77
SCN3B-206ENST00000530277 NBEAQ8NFP9 2946 aa10.25□□□□□ -0.77
SCN3B-206ENST00000530277 UBE2CO00762 179 aa10.25□□□□□ -0.77
SCN3B-206ENST00000530277 FOXH1O75593 365 aa10.25□□□□□ -0.77
SCN3B-206ENST00000530277 HIST1H1BP16401 226 aaKnown RBP10.25□□□□□ -0.77
SCN3B-206ENST00000530277 CSN1S1P47710 185 aa10.25□□□□□ -0.77
SCN3B-206ENST00000530277 IL15RAQ13261 267 aa10.25□□□□□ -0.77
SCN3B-206ENST00000530277 ASCL4Q6XD76 172 aa10.25□□□□□ -0.77
SCN3B-206ENST00000530277 MMD2Q8IY49 270 aa10.25□□□□□ -0.77
SCN3B-206ENST00000530277 VSTM2AQ8TAG5 236 aa10.25□□□□□ -0.77
SCN3B-206ENST00000530277 NEUROG1Q92886 237 aa10.25□□□□□ -0.77
SCN3B-206ENST00000530277 MAP1AP78559 2803 aaPredicted RBP10.25□□□□□ -0.77
SCN3B-206ENST00000530277 KBTBD11-OT1A0A1B0GTJ5 212 aa10.24□□□□□ -0.77
SCN3B-206ENST00000530277 ZNF785A8K8V0 405 aa10.24□□□□□ -0.77
SCN3B-206ENST00000530277 K7EQM0 130 aa10.24□□□□□ -0.77
SCN3B-206ENST00000530277 IGKV1D-33P01593 117 aa10.24□□□□□ -0.77
SCN3B-206ENST00000530277 IGKV1-33P01594 117 aa10.24□□□□□ -0.77
SCN3B-206ENST00000530277 HTR1DP28221 377 aa10.24□□□□□ -0.77
SCN3B-206ENST00000530277 SRIP30626 198 aa10.24□□□□□ -0.77
SCN3B-206ENST00000530277 TFPI2P48307 235 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms