RNA–Protein interactions for RNA: ENST00000528475.1

GSDMD-208, Transcript of gasdermin D, human

TSL 2

Gene GSDMD, Length 2,067 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GSDMD-208	ENST00000528475	SLC17A3	O00476	420 aa		19.08	■□□□□ 0.64
GSDMD-208	ENST00000528475	ACTL6B	O94805	426 aa		19.08	■□□□□ 0.64
GSDMD-208	ENST00000528475	IGKV1-16	P04430	117 aa		19.08	■□□□□ 0.64
GSDMD-208	ENST00000528475	ZNF833P	Q6ZTB9	187 aa		19.08	■□□□□ 0.64
GSDMD-208	ENST00000528475	CMTM2	Q8TAZ6	248 aa		19.08	■□□□□ 0.64
GSDMD-208	ENST00000528475	ZNF503	Q96F45	646 aa		19.08	■□□□□ 0.64
GSDMD-208	ENST00000528475		A0A1B0GUS0	222 aa		19.07	■□□□□ 0.64
GSDMD-208	ENST00000528475	HELT	A6NFD8	242 aa		19.07	■□□□□ 0.64
GSDMD-208	ENST00000528475	RNASE2	P10153	161 aa	Known RBP	19.07	■□□□□ 0.64
GSDMD-208	ENST00000528475	PAFAH1B2	P68402	229 aa		19.07	■□□□□ 0.64
GSDMD-208	ENST00000528475		Q6ZS92	163 aa		19.07	■□□□□ 0.64
GSDMD-208	ENST00000528475	WFIKKN1	Q96NZ8	548 aa		19.07	■□□□□ 0.64
GSDMD-208	ENST00000528475	MS4A10	Q96PG2	267 aa		19.07	■□□□□ 0.64
GSDMD-208	ENST00000528475	MRPL18	Q9H0U6	180 aa	Known RBP	19.07	■□□□□ 0.64
GSDMD-208	ENST00000528475	IRF2	P14316	349 aa		19.07	■□□□□ 0.64
GSDMD-208	ENST00000528475	CBLN1	P23435	193 aa		19.07	■□□□□ 0.64
GSDMD-208	ENST00000528475	CEACAM8	P31997	349 aa	Predicted RBP	19.07	■□□□□ 0.64
GSDMD-208	ENST00000528475	TAS2R45	P59539	299 aa		19.07	■□□□□ 0.64
GSDMD-208	ENST00000528475	MMD2	Q8IY49	270 aa		19.07	■□□□□ 0.64
GSDMD-208	ENST00000528475	NUP37	Q8NFH4	326 aa		19.07	■□□□□ 0.64
GSDMD-208	ENST00000528475	OSR1	Q8TAX0	266 aa	Predicted RBP	19.07	■□□□□ 0.64
GSDMD-208	ENST00000528475	NAGK	Q9UJ70	344 aa		19.07	■□□□□ 0.64
GSDMD-208	ENST00000528475	TP53TG3	Q9ULZ0	132 aa		19.07	■□□□□ 0.64
GSDMD-208	ENST00000528475	SAA1	P0DJI8	122 aa	Predicted RBP	19.06	■□□□□ 0.64
GSDMD-208	ENST00000528475	CD40	P25942	277 aa		19.06	■□□□□ 0.64
GSDMD-208	ENST00000528475	OR10J1	P30954	320 aa		19.06	■□□□□ 0.64
GSDMD-208	ENST00000528475	GNG4	P50150	75 aa		19.06	■□□□□ 0.64
GSDMD-208	ENST00000528475	CENPW	Q5EE01	88 aa		19.06	■□□□□ 0.64
GSDMD-208	ENST00000528475	OR1L6	Q8NGR2	347 aa		19.06	■□□□□ 0.64
GSDMD-208	ENST00000528475	INS-IGF2	F8WCM5	200 aa		19.05	■□□□□ 0.64
GSDMD-208	ENST00000528475	SCGB1D1	O95968	90 aa		19.05	■□□□□ 0.64
GSDMD-208	ENST00000528475	COL8A2	P25067	703 aa		19.05	■□□□□ 0.64
GSDMD-208	ENST00000528475	ERVFC1-1	P60608	527 aa		19.05	■□□□□ 0.64
GSDMD-208	ENST00000528475	CD69	Q07108	199 aa		19.05	■□□□□ 0.64
GSDMD-208	ENST00000528475	C1orf194	Q5T5A4	169 aa		19.05	■□□□□ 0.64
GSDMD-208	ENST00000528475	MOB3B	Q86TA1	216 aa		19.05	■□□□□ 0.64
GSDMD-208	ENST00000528475	FAM122A	Q96E09	287 aa		19.05	■□□□□ 0.64
GSDMD-208	ENST00000528475	OSTC	Q9NRP0	149 aa		19.05	■□□□□ 0.64
GSDMD-208	ENST00000528475	CRYBB3	P26998	211 aa		19.05	■□□□□ 0.64
GSDMD-208	ENST00000528475	MEF2C	Q06413	473 aa	Predicted RBP	19.05	■□□□□ 0.64
GSDMD-208	ENST00000528475	CACNG8	Q8WXS5	425 aa		19.05	■□□□□ 0.64
GSDMD-208	ENST00000528475	MISP3	Q96FF7	219 aa		19.05	■□□□□ 0.64
GSDMD-208	ENST00000528475	GNB1L	Q9BYB4	327 aa		19.05	■□□□□ 0.64
GSDMD-208	ENST00000528475	KIR2DL5B	A0A0G2JN68	375 aa		19.04	■□□□□ 0.64
GSDMD-208	ENST00000528475	KIR2DL5B	A0A0G2JPC4	375 aa		19.04	■□□□□ 0.64
GSDMD-208	ENST00000528475		A0A1W2PRE2	83 aa		19.04	■□□□□ 0.64
GSDMD-208	ENST00000528475	CRISP2	P16562	243 aa		19.04	■□□□□ 0.64
GSDMD-208	ENST00000528475	TPPP2	P59282	170 aa		19.04	■□□□□ 0.64
GSDMD-208	ENST00000528475		Q0VG73	95 aa		19.04	■□□□□ 0.64
GSDMD-208	ENST00000528475	KRTCAP3	Q53RY4	240 aa		19.04	■□□□□ 0.64
GSDMD-208	ENST00000528475	KIR2DL5A	Q8N109	375 aa		19.04	■□□□□ 0.64
GSDMD-208	ENST00000528475	MRPL32	Q9BYC8	188 aa	Known RBP	19.04	■□□□□ 0.64
GSDMD-208	ENST00000528475	GAL3ST2	Q9H3Q3	398 aa		19.04	■□□□□ 0.64
GSDMD-208	ENST00000528475	GRIFIN	A4D1Z8	144 aa		19.04	■□□□□ 0.64
GSDMD-208	ENST00000528475	NKX6-3	A6NJ46	265 aa		19.04	■□□□□ 0.64
GSDMD-208	ENST00000528475	NBL1	P41271	181 aa		19.04	■□□□□ 0.64
GSDMD-208	ENST00000528475	LINC00310	P59036	64 aa		19.04	■□□□□ 0.64
GSDMD-208	ENST00000528475	RPL19	P84098	196 aa	Known RBP	19.04	■□□□□ 0.64
GSDMD-208	ENST00000528475	RNF2	Q99496	336 aa		19.04	■□□□□ 0.64
GSDMD-208	ENST00000528475	POLR3K	Q9Y2Y1	108 aa	Predicted RBP	19.04	■□□□□ 0.64
GSDMD-208	ENST00000528475	RAN	P62826	216 aa	Known RBP	19.03	■□□□□ 0.64
GSDMD-208	ENST00000528475	NDUFA4L2	Q9NRX3	87 aa		19.03	■□□□□ 0.64
GSDMD-208	ENST00000528475	APOA2	P02652	100 aa		19.02	■□□□□ 0.64
GSDMD-208	ENST00000528475	C8orf88	P0DMB2	117 aa		19.02	■□□□□ 0.64
GSDMD-208	ENST00000528475	FAM27E3	Q08E93	113 aa		19.02	■□□□□ 0.64
GSDMD-208	ENST00000528475	OR5I1	Q13606	314 aa		19.02	■□□□□ 0.64
GSDMD-208	ENST00000528475	COX19	Q49B96	90 aa		19.02	■□□□□ 0.64
GSDMD-208	ENST00000528475	TMEM177	Q53S58	311 aa		19.02	■□□□□ 0.64
GSDMD-208	ENST00000528475	C22orf34	Q6ZV56	151 aa		19.02	■□□□□ 0.64
GSDMD-208	ENST00000528475	SLC25A33	Q9BSK2	321 aa		19.02	■□□□□ 0.64
GSDMD-208	ENST00000528475	TMEM106B	Q9NUM4	274 aa		19.02	■□□□□ 0.64
GSDMD-208	ENST00000528475	GGTLC3	B5MD39	225 aa		19.02	■□□□□ 0.63
GSDMD-208	ENST00000528475	DLL1	O00548	723 aa		19.02	■□□□□ 0.63
GSDMD-208	ENST00000528475	FCN1	O00602	326 aa		19.02	■□□□□ 0.63
GSDMD-208	ENST00000528475	OR7C2	O60412	319 aa		19.02	■□□□□ 0.63
GSDMD-208	ENST00000528475	SNRPC	P09234	159 aa	Known RBP	19.02	■□□□□ 0.63
GSDMD-208	ENST00000528475	TIGIT	Q495A1	244 aa		19.02	■□□□□ 0.63
GSDMD-208	ENST00000528475	SNRNP40	Q96DI7	357 aa	Known RBP	19.02	■□□□□ 0.63
GSDMD-208	ENST00000528475	ZNRD1	Q9P1U0	126 aa		19.02	■□□□□ 0.63
GSDMD-208	ENST00000528475	ISLR	O14498	428 aa		19.01	■□□□□ 0.63
GSDMD-208	ENST00000528475	CRYAB	P02511	175 aa	Known RBP	19.01	■□□□□ 0.63
GSDMD-208	ENST00000528475	MT-ND6	P03923	174 aa		19.01	■□□□□ 0.63
GSDMD-208	ENST00000528475	IER3	P46695	156 aa		19.01	■□□□□ 0.63
GSDMD-208	ENST00000528475	CX3CL1	P78423	397 aa		19.01	■□□□□ 0.63
GSDMD-208	ENST00000528475	OR5AN1	Q8NGI8	311 aa		19.01	■□□□□ 0.63
GSDMD-208	ENST00000528475	OR9G1	Q8NH87	305 aa		19.01	■□□□□ 0.63
GSDMD-208	ENST00000528475	MRPL20	Q9BYC9	149 aa	Known RBP	19.01	■□□□□ 0.63
GSDMD-208	ENST00000528475	DCAF16	Q9NXF7	216 aa		19.01	■□□□□ 0.63
GSDMD-208	ENST00000528475	EP300	Q09472	2414 aa	Predicted RBP	19.01	■□□□□ 0.63
GSDMD-208	ENST00000528475	PSMB11	A5LHX3	300 aa		19.01	■□□□□ 0.63
GSDMD-208	ENST00000528475		H0YJW9	148 aa		19.01	■□□□□ 0.63
GSDMD-208	ENST00000528475	NDUFB7	P17568	137 aa		19.01	■□□□□ 0.63
GSDMD-208	ENST00000528475	TNFRSF1A	P19438	455 aa		19.01	■□□□□ 0.63
GSDMD-208	ENST00000528475	GATA2	P23769	480 aa	Predicted RBP	19.01	■□□□□ 0.63
GSDMD-208	ENST00000528475	WDR73	Q6P4I2	378 aa		19.01	■□□□□ 0.63
GSDMD-208	ENST00000528475	OR8I2	Q8N0Y5	310 aa		19.01	■□□□□ 0.63
GSDMD-208	ENST00000528475	ZNF714	Q96N38	554 aa		19.01	■□□□□ 0.63
GSDMD-208	ENST00000528475	CAD	P27708	2225 aa		19	■□□□□ 0.63
GSDMD-208	ENST00000528475	SNURFL	B1AK76	121 aa		19	■□□□□ 0.63
GSDMD-208	ENST00000528475	PPOX	P50336	477 aa		19	■□□□□ 0.63

Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms