RNA–Protein interactions for RNA: ENST00000525013.1

CAPN1-203, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-203ENST00000525013 OR1L6Q8NGR2 347 aa13.98□□□□□ -0.17
CAPN1-203ENST00000525013 ZNF486Q96H40 463 aaPredicted RBP13.98□□□□□ -0.17
CAPN1-203ENST00000525013 SPATA25Q9BR10 227 aa13.98□□□□□ -0.17
CAPN1-203ENST00000525013 C21orf62Q9NYP8 219 aa13.98□□□□□ -0.17
CAPN1-203ENST00000525013 MLXQ9UH92 298 aa13.98□□□□□ -0.17
CAPN1-203ENST00000525013 UFC1Q9Y3C8 167 aa13.98□□□□□ -0.17
CAPN1-203ENST00000525013 OR11H12B2RN74 326 aa13.97□□□□□ -0.17
CAPN1-203ENST00000525013 RAB3DO95716 219 aa13.97□□□□□ -0.17
CAPN1-203ENST00000525013 TAS2R19P59542 299 aa13.97□□□□□ -0.17
CAPN1-203ENST00000525013 RND3P61587 244 aa13.97□□□□□ -0.17
CAPN1-203ENST00000525013 SCGB2B2Q4G0G5 96 aa13.97□□□□□ -0.17
CAPN1-203ENST00000525013 BTNL8Q6UX41 500 aa13.97□□□□□ -0.17
CAPN1-203ENST00000525013 TMEM229BQ8NBD8 167 aa13.97□□□□□ -0.17
CAPN1-203ENST00000525013 SCARB1Q8WTV0 552 aa13.97□□□□□ -0.17
CAPN1-203ENST00000525013 MARC2Q969Z3 335 aa13.97□□□□□ -0.17
CAPN1-203ENST00000525013 BSCL2Q96G97 398 aaPredicted RBP13.97□□□□□ -0.17
CAPN1-203ENST00000525013 WFDC10AQ9H1F0 79 aa13.97□□□□□ -0.17
CAPN1-203ENST00000525013 COPZ2Q9P299 210 aa13.97□□□□□ -0.17
CAPN1-203ENST00000525013 GABARAPH6UMI1 98 aa13.96□□□□□ -0.17
CAPN1-203ENST00000525013 SCAF4O95104 1147 aaKnown RBP13.96□□□□□ -0.17
CAPN1-203ENST00000525013 Q56UQ5 140 aa13.96□□□□□ -0.17
CAPN1-203ENST00000525013 STEAP1BQ6NZ63 245 aa13.96□□□□□ -0.17
CAPN1-203ENST00000525013 SPSB3Q6PJ21 355 aa13.96□□□□□ -0.17
CAPN1-203ENST00000525013 SLC16A13Q7RTY0 426 aa13.96□□□□□ -0.17
CAPN1-203ENST00000525013 OR1P1Q8NH06 330 aa13.96□□□□□ -0.17
CAPN1-203ENST00000525013 TERB2Q8NHR7 220 aa13.96□□□□□ -0.17
CAPN1-203ENST00000525013 ZFAND1Q8TCF1 268 aa13.96□□□□□ -0.17
CAPN1-203ENST00000525013 RAB2BQ8WUD1 216 aa13.96□□□□□ -0.17
CAPN1-203ENST00000525013 CITED4Q96RK1 184 aa13.96□□□□□ -0.17
CAPN1-203ENST00000525013 MRPL27Q9P0M9 148 aaKnown RBP13.96□□□□□ -0.17
CAPN1-203ENST00000525013 CEPT1Q9Y6K0 416 aa13.96□□□□□ -0.17
CAPN1-203ENST00000525013 K7EIM0 57 aa13.95□□□□□ -0.18
CAPN1-203ENST00000525013 CD74P04233 296 aa13.95□□□□□ -0.18
CAPN1-203ENST00000525013 AKR1C2P52895 323 aa13.95□□□□□ -0.18
CAPN1-203ENST00000525013 ELLP55199 621 aaPredicted RBP13.95□□□□□ -0.18
CAPN1-203ENST00000525013 HSPE1P61604 102 aaKnown RBP13.95□□□□□ -0.18
CAPN1-203ENST00000525013 IZUMO4Q1ZYL8 232 aa13.95□□□□□ -0.18
CAPN1-203ENST00000525013 RBPMS2Q6ZRY4 209 aaKnown RBP13.95□□□□□ -0.18
CAPN1-203ENST00000525013 OR2C3Q8N628 320 aa13.95□□□□□ -0.18
CAPN1-203ENST00000525013 CCDC71LQ8N9Z2 235 aa13.95□□□□□ -0.18
CAPN1-203ENST00000525013 OR52B4Q8NGK2 314 aa13.95□□□□□ -0.18
CAPN1-203ENST00000525013 OR13C8Q8NGS7 320 aa13.95□□□□□ -0.18
CAPN1-203ENST00000525013 MISP3Q96FF7 219 aa13.95□□□□□ -0.18
CAPN1-203ENST00000525013 TP53RKQ96S44 253 aa13.95□□□□□ -0.18
CAPN1-203ENST00000525013 CHRDL1Q9BU40 450 aa13.95□□□□□ -0.18
CAPN1-203ENST00000525013 ZNF436Q9C0F3 470 aaPredicted RBP13.95□□□□□ -0.18
CAPN1-203ENST00000525013 SRD5A3Q9H8P0 318 aa13.95□□□□□ -0.18
CAPN1-203ENST00000525013 C3orf85A0A1B0GTC6 90 aa13.94□□□□□ -0.18
CAPN1-203ENST00000525013 C8orf88P0DMB2 117 aa13.94□□□□□ -0.18
CAPN1-203ENST00000525013 LYL1P12980 280 aa13.94□□□□□ -0.18
CAPN1-203ENST00000525013 MRPS10P82664 201 aaKnown RBP13.94□□□□□ -0.18
CAPN1-203ENST00000525013 PRCDQ00LT1 54 aa13.94□□□□□ -0.18
CAPN1-203ENST00000525013 SSBP1Q04837 148 aaKnown RBP13.94□□□□□ -0.18
CAPN1-203ENST00000525013 TRIM16LQ309B1 348 aa13.94□□□□□ -0.18
CAPN1-203ENST00000525013 SP6Q3SY56 376 aa13.94□□□□□ -0.18
CAPN1-203ENST00000525013 SPINK9Q5DT21 86 aa13.94□□□□□ -0.18
CAPN1-203ENST00000525013 MARCH1Q8TCQ1 289 aa13.94□□□□□ -0.18
CAPN1-203ENST00000525013 TMEM190Q8WZ59 177 aa13.94□□□□□ -0.18
CAPN1-203ENST00000525013 DIRAS2Q96HU8 199 aa13.94□□□□□ -0.18
CAPN1-203ENST00000525013 C20orf24Q9BUV8 137 aa13.94□□□□□ -0.18
CAPN1-203ENST00000525013 IGHV3OR16-8A0A075B7F1 116 aa13.93□□□□□ -0.18
CAPN1-203ENST00000525013 RBMY1BA6NDE4 496 aaKnown RBP13.93□□□□□ -0.18
CAPN1-203ENST00000525013 RBMY1EA6NEQ0 496 aaKnown RBP13.93□□□□□ -0.18
CAPN1-203ENST00000525013 NOL3O60936 208 aaKnown RBP13.93□□□□□ -0.18
CAPN1-203ENST00000525013 ATG12O94817 140 aa13.93□□□□□ -0.18
CAPN1-203ENST00000525013 IGKV1-5P01602 117 aa13.93□□□□□ -0.18
CAPN1-203ENST00000525013 RBMY1DP0C7P1 496 aaKnown RBP13.93□□□□□ -0.18
CAPN1-203ENST00000525013 TMBIM6P55061 237 aa13.93□□□□□ -0.18
CAPN1-203ENST00000525013 ERHP84090 104 aaKnown RBP13.93□□□□□ -0.18
CAPN1-203ENST00000525013 IL18Q14116 193 aa13.93□□□□□ -0.18
CAPN1-203ENST00000525013 ANKRD55Q3KP44 614 aa13.93□□□□□ -0.18
CAPN1-203ENST00000525013 FAAP20Q6NZ36 180 aa13.93□□□□□ -0.18
CAPN1-203ENST00000525013 ISOC1Q96CN7 298 aa13.93□□□□□ -0.18
CAPN1-203ENST00000525013 ATP6V0BQ99437 205 aa13.93□□□□□ -0.18
CAPN1-203ENST00000525013 DAZ1Q9NQZ3 744 aaKnown RBP13.93□□□□□ -0.18
CAPN1-203ENST00000525013 CCDC59Q9P031 241 aaKnown RBP13.93□□□□□ -0.18
CAPN1-203ENST00000525013 DNAH7Q8WXX0 4024 aa13.92□□□□□ -0.18
CAPN1-203ENST00000525013 TRAV25A0A0B4J276 109 aa13.92□□□□□ -0.18
CAPN1-203ENST00000525013 NDUFA4O00483 81 aa13.92□□□□□ -0.18
CAPN1-203ENST00000525013 ZNF207O43670 478 aaKnown RBP13.92□□□□□ -0.18
CAPN1-203ENST00000525013 ADMP35318 185 aa13.92□□□□□ -0.18
CAPN1-203ENST00000525013 MEF2DQ14814 521 aa13.92□□□□□ -0.18
CAPN1-203ENST00000525013 CASC10Q5T4H9 136 aa13.92□□□□□ -0.18
CAPN1-203ENST00000525013 LINC00322Q6ZN03 302 aaPredicted RBP13.92□□□□□ -0.18
CAPN1-203ENST00000525013 SLC35G3Q8N808 338 aa13.92□□□□□ -0.18
CAPN1-203ENST00000525013 RNASE11Q8TAA1 199 aaKnown RBP13.92□□□□□ -0.18
CAPN1-203ENST00000525013 DYNC2LI1Q8TCX1 351 aa13.92□□□□□ -0.18
CAPN1-203ENST00000525013 SMIM4Q8WVI0 70 aa13.92□□□□□ -0.18
CAPN1-203ENST00000525013 PINX1Q96BK5 328 aaKnown RBP13.92□□□□□ -0.18
CAPN1-203ENST00000525013 BCL7BQ9BQE9 202 aa13.92□□□□□ -0.18
CAPN1-203ENST00000525013 C6orf62Q9GZU0 229 aaPredicted RBP13.92□□□□□ -0.18
CAPN1-203ENST00000525013 RETNQ9HD89 108 aa13.92□□□□□ -0.18
CAPN1-203ENST00000525013 GAR1Q9NY12 217 aaKnown RBP13.92□□□□□ -0.18
CAPN1-203ENST00000525013 C14orf166Q9Y224 244 aaKnown RBP13.92□□□□□ -0.18
CAPN1-203ENST00000525013 A0A0B4J293 547 aa13.91□□□□□ -0.18
CAPN1-203ENST00000525013 DISC1C4P0D8 188 aa13.91□□□□□ -0.18
CAPN1-203ENST00000525013 F8W735 103 aaPredicted RBP13.91□□□□□ -0.18
CAPN1-203ENST00000525013 NUPL2O15504 423 aaKnown RBP13.91□□□□□ -0.18
CAPN1-203ENST00000525013 IFNA17P01571 189 aa13.91□□□□□ -0.18
CAPN1-203ENST00000525013 IGHV3-48P01763 117 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms